© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2954.t1 |
| Gene name | |
| Location | scaffold_016:17022..17892 |
| Strand | - |
| Gene length (bp) | 870 |
| Transcript length (bp) | 870 |
| Coding sequence length (bp) | 870 |
| Protein length (aa) | 290 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05721 | PhyH | Phytanoyl-CoA dioxygenase (PhyH) | 1.1E-15 | 5 | 203 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2954.t1 MMKYHGVVIIRGLICEEVLEKVDNDIKPHFRDGCDNPLFHQKTRIVSSLPRKSPAFVEFIVCNPFWMEVCDALLT SHHQAWMGDQNYTFDSSPIYNSSAAFSTLPGNDAQLLHRDDMNNHAKRAAITPEEYTTGRDVIITTFFASTRTKK ENGATRFIPGPHLQDTMERPDESQAVYVELERGDVFMMLGSCYHAASANVTEHEERVLYTVFTTNPRYRQFENIF LSLPLDKLRKFPPRIQKRLGFCSGNPISIWLDLRDMRMVLGLPEPSTMQQLQRTTSKDCKLNNV* |
| Coding | >Ani_SJS72_1|g2954.t1 ATGATGAAGTACCACGGGGTTGTTATTATTCGCGGATTGATTTGTGAGGAAGTCTTGGAAAAAGTCGACAACGAC ATTAAACCTCATTTCCGGGACGGCTGCGACAATCCGCTCTTTCACCAAAAAACCCGAATTGTGTCCTCGTTACCC AGAAAATCCCCCGCATTCGTGGAGTTTATCGTCTGCAACCCATTCTGGATGGAGGTGTGCGATGCCCTTCTCACC TCTCACCACCAGGCTTGGATGGGCGACCAAAATTATACGTTCGACTCAAGCCCCATCTACAATTCGTCCGCGGCA TTCTCTACACTGCCTGGAAATGATGCACAGCTGTTACACCGTGATGATATGAATAATCATGCGAAACGAGCAGCC ATCACCCCGGAAGAATACACCACCGGACGGGACGTAATCATCACGACGTTCTTCGCCAGCACGCGCACGAAAAAG GAGAATGGGGCCACTCGGTTCATCCCGGGGCCTCATCTGCAAGATACCATGGAGAGGCCAGATGAGAGTCAAGCG GTATATGTTGAATTGGAACGGGGTGATGTCTTCATGATGCTGGGGAGTTGCTACCATGCCGCATCGGCCAACGTA ACGGAGCATGAAGAACGCGTCTTGTACACTGTCTTCACGACTAACCCGCGATACCGCCAGTTTGAGAACATCTTC TTGTCACTTCCTCTCGATAAGCTGCGCAAATTTCCCCCTCGCATACAGAAACGGCTGGGATTCTGTTCCGGCAAT CCTATATCTATCTGGCTCGACCTCCGAGATATGCGGATGGTTCTCGGCCTTCCCGAGCCAAGCACTATGCAGCAA CTCCAGAGAACTACGTCCAAGGATTGCAAGCTGAATAATGTTTGA |
| Transcript | >Ani_SJS72_1|g2954.t1 ATGATGAAGTACCACGGGGTTGTTATTATTCGCGGATTGATTTGTGAGGAAGTCTTGGAAAAAGTCGACAACGAC ATTAAACCTCATTTCCGGGACGGCTGCGACAATCCGCTCTTTCACCAAAAAACCCGAATTGTGTCCTCGTTACCC AGAAAATCCCCCGCATTCGTGGAGTTTATCGTCTGCAACCCATTCTGGATGGAGGTGTGCGATGCCCTTCTCACC TCTCACCACCAGGCTTGGATGGGCGACCAAAATTATACGTTCGACTCAAGCCCCATCTACAATTCGTCCGCGGCA TTCTCTACACTGCCTGGAAATGATGCACAGCTGTTACACCGTGATGATATGAATAATCATGCGAAACGAGCAGCC ATCACCCCGGAAGAATACACCACCGGACGGGACGTAATCATCACGACGTTCTTCGCCAGCACGCGCACGAAAAAG GAGAATGGGGCCACTCGGTTCATCCCGGGGCCTCATCTGCAAGATACCATGGAGAGGCCAGATGAGAGTCAAGCG GTATATGTTGAATTGGAACGGGGTGATGTCTTCATGATGCTGGGGAGTTGCTACCATGCCGCATCGGCCAACGTA ACGGAGCATGAAGAACGCGTCTTGTACACTGTCTTCACGACTAACCCGCGATACCGCCAGTTTGAGAACATCTTC TTGTCACTTCCTCTCGATAAGCTGCGCAAATTTCCCCCTCGCATACAGAAACGGCTGGGATTCTGTTCCGGCAAT CCTATATCTATCTGGCTCGACCTCCGAGATATGCGGATGGTTCTCGGCCTTCCCGAGCCAAGCACTATGCAGCAA CTCCAGAGAACTACGTCCAAGGATTGCAAGCTGAATAATGTTTGA |
| Gene | >Ani_SJS72_1|g2954.t1 ATGATGAAGTACCACGGGGTTGTTATTATTCGCGGATTGATTTGTGAGGAAGTCTTGGAAAAAGTCGACAACGAC ATTAAACCTCATTTCCGGGACGGCTGCGACAATCCGCTCTTTCACCAAAAAACCCGAATTGTGTCCTCGTTACCC AGAAAATCCCCCGCATTCGTGGAGTTTATCGTCTGCAACCCATTCTGGATGGAGGTGTGCGATGCCCTTCTCACC TCTCACCACCAGGCTTGGATGGGCGACCAAAATTATACGTTCGACTCAAGCCCCATCTACAATTCGTCCGCGGCA TTCTCTACACTGCCTGGAAATGATGCACAGCTGTTACACCGTGATGATATGAATAATCATGCGAAACGAGCAGCC ATCACCCCGGAAGAATACACCACCGGACGGGACGTAATCATCACGACGTTCTTCGCCAGCACGCGCACGAAAAAG GAGAATGGGGCCACTCGGTTCATCCCGGGGCCTCATCTGCAAGATACCATGGAGAGGCCAGATGAGAGTCAAGCG GTATATGTTGAATTGGAACGGGGTGATGTCTTCATGATGCTGGGGAGTTGCTACCATGCCGCATCGGCCAACGTA ACGGAGCATGAAGAACGCGTCTTGTACACTGTCTTCACGACTAACCCGCGATACCGCCAGTTTGAGAACATCTTC TTGTCACTTCCTCTCGATAAGCTGCGCAAATTTCCCCCTCGCATACAGAAACGGCTGGGATTCTGTTCCGGCAAT CCTATATCTATCTGGCTCGACCTCCGAGATATGCGGATGGTTCTCGGCCTTCCCGAGCCAAGCACTATGCAGCAA CTCCAGAGAACTACGTCCAAGGATTGCAAGCTGAATAATGTTTGA |