© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g2928.t1 |
| Gene name | |
| Location | scaffold_015:399810..401487 |
| Strand | - |
| Gene length (bp) | 1677 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-25 | 25 | 395 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.7E-06 | 43 | 469 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 95 | 117 | 22 |
| 4 | 130 | 152 | 22 |
| 5 | 167 | 189 | 22 |
| 6 | 264 | 286 | 22 |
| 7 | 306 | 328 | 22 |
| 8 | 341 | 358 | 17 |
| 9 | 373 | 395 | 22 |
| 10 | 422 | 444 | 22 |
| 11 | 448 | 470 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2928.t1 MTASAERSTAKGWRSSSQFIIGTACLAMFTESLLAGFPVPMLPYMLEERLHNDPSQTTATTNSLLSLHGLASIIA APSCAALFDTISNQKIPLYLALVLCLAGTALFAITTTSWVLYLGRILQAVAGSAAWLACTTMLTELAGSAGAGAM LGLSMSSATLGTVSGPMLGGVLLGWFGYWPAWSLPMVLLILDMIARFVLIQPDHLLLDSPSLIRHAERSKIYHEM EETVTETSPFLPQSPSFGSDTAAEEKSDNAAATKYRNYYTVMLQHAGMWAGVLNTMSQAALRAAFNATLPVYLRD TFNWGPSSVGAIFFALQVPIILFSPIIGHLRDRVGTRYPTAVGWALLCPLMCYLGIPGRDISQASGSRTGEEVAF IACICGIGLVMPSVQGAGSFHMRFLLEEVEKDAPTMFGPNGGRARCFALVSISFNLGLVLGPFVIGWLFEQVGYY YMNIALGAACMGVAVVTFIFC* |
| Coding | >Ani_SJS72_1|g2928.t1 ATGACAGCCTCCGCAGAGCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGACCGCGTGC CTGGCCATGTTTACTGAGTCGCTTTTAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTT CACAACGACCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCAGTCTACACGGTCTGGCGTCAATAATAGCT GCCCCTTCTTGCGCGGCTTTGTTCGACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGC CTGGCTGGGACTGCGCTGTTTGCAATCACCACCACATCATGGGTGCTATACCTGGGCAGGATTCTGCAGGCAGTT GCTGGCTCGGCTGCATGGCTCGCGTGTACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGGAGCTGGGGCAATG TTGGGACTGAGCATGTCTTCTGCAACTTTGGGAACGGTGAGCGGACCAATGCTTGGAGGCGTTCTGTTGGGCTGG TTCGGATACTGGCCAGCTTGGTCTCTACCAATGGTTCTACTAATTCTCGACATGATTGCGCGCTTTGTTCTGATT CAACCCGACCATCTTTTACTAGATTCACCGTCTCTAATCAGACATGCCGAGCGCAGCAAGATATATCATGAAATG GAGGAAACTGTGACGGAAACGTCCCCTTTCCTGCCACAATCGCCTTCATTTGGCTCAGATACCGCAGCGGAGGAG AAGTCTGACAACGCTGCGGCTACGAAATATCGCAATTACTATACAGTAATGCTCCAACATGCTGGAATGTGGGCA GGCGTTCTGAATACGATGTCCCAAGCTGCACTACGGGCGGCATTCAACGCTACCTTGCCCGTGTATCTTCGGGAT ACCTTTAATTGGGGCCCATCATCAGTCGGGGCGATTTTCTTTGCCCTCCAAGTCCCTATAATCTTGTTCTCTCCC ATTATTGGCCACCTCCGAGATCGTGTCGGTACACGATACCCAACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTG ATGTGCTATTTGGGCATACCTGGCAGAGACATCTCTCAGGCTAGTGGGAGCCGGACAGGTGAAGAGGTCGCCTTT ATCGCGTGCATATGTGGTATAGGCTTGGTGATGCCATCGGTTCAAGGTGCCGGATCATTTCACATGCGCTTCCTC CTGGAGGAAGTTGAAAAAGATGCTCCCACCATGTTTGGCCCCAATGGTGGGCGTGCGAGGTGCTTCGCATTGGTG TCTATCTCGTTTAACCTCGGTCTGGTGCTGGGTCCATTTGTTATTGGATGGCTGTTTGAGCAAGTGGGATACTAT TATATGAATATCGCTCTCGGTGCTGCTTGCATGGGGGTGGCGGTGGTGACGTTTATATTCTGTTGA |
| Transcript | >Ani_SJS72_1|g2928.t1 ATGACAGCCTCCGCAGAGCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGACCGCGTGC CTGGCCATGTTTACTGAGTCGCTTTTAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTT CACAACGACCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCAGTCTACACGGTCTGGCGTCAATAATAGCT GCCCCTTCTTGCGCGGCTTTGTTCGACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGC CTGGCTGGGACTGCGCTGTTTGCAATCACCACCACATCATGGGTGCTATACCTGGGCAGGATTCTGCAGGCAGTT GCTGGCTCGGCTGCATGGCTCGCGTGTACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGGAGCTGGGGCAATG TTGGGACTGAGCATGTCTTCTGCAACTTTGGGAACGGTGAGCGGACCAATGCTTGGAGGCGTTCTGTTGGGCTGG TTCGGATACTGGCCAGCTTGGTCTCTACCAATGGTTCTACTAATTCTCGACATGATTGCGCGCTTTGTTCTGATT CAACCCGACCATCTTTTACTAGATTCACCGTCTCTAATCAGACATGCCGAGCGCAGCAAGATATATCATGAAATG GAGGAAACTGTGACGGAAACGTCCCCTTTCCTGCCACAATCGCCTTCATTTGGCTCAGATACCGCAGCGGAGGAG AAGTCTGACAACGCTGCGGCTACGAAATATCGCAATTACTATACAGTAATGCTCCAACATGCTGGAATGTGGGCA GGCGTTCTGAATACGATGTCCCAAGCTGCACTACGGGCGGCATTCAACGCTACCTTGCCCGTGTATCTTCGGGAT ACCTTTAATTGGGGCCCATCATCAGTCGGGGCGATTTTCTTTGCCCTCCAAGTCCCTATAATCTTGTTCTCTCCC ATTATTGGCCACCTCCGAGATCGTGTCGGTACACGATACCCAACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTG ATGTGCTATTTGGGCATACCTGGCAGAGACATCTCTCAGGCTAGTGGGAGCCGGACAGGTGAAGAGGTCGCCTTT ATCGCGTGCATATGTGGTATAGGCTTGGTGATGCCATCGGTTCAAGGTGCCGGATCATTTCACATGCGCTTCCTC CTGGAGGAAGTTGAAAAAGATGCTCCCACCATGTTTGGCCCCAATGGTGGGCGTGCGAGGTGCTTCGCATTGGTG TCTATCTCGTTTAACCTCGGTCTGGTGCTGGGTCCATTTGTTATTGGATGGCTGTTTGAGCAAGTGGGATACTAT TATATGAATATCGCTCTCGGTGCTGCTTGCATGGGGGTGGCGGTGGTGACGTTTATATTCTGTTGA |
| Gene | >Ani_SJS72_1|g2928.t1 ATGACAGCCTCCGCAGAGCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGACCGCGTGC CTGGCCATGTTTACTGGTACGAAGACACACCTGCTTACTGCCGCTAACAACTTTCCACATCCTCTAATCATACCA ATAAACAGAGTCGCTTTTAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTTCACAACGA CCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCAGTCTACACGGTCTGGCGTCAATAATAGCTGCCCCTTC TTGCGCGGCTTTGTTCGACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGCCTGGCTGG GACTGCGCTGTTTGCAATCACCACCACATGTATTCGTCACCCCTAGCCGCACTTTCTTGCTGCTACGAATGCTGA TAGTGTTTATGGCCCAGCATGGGTGCTATACCTGGGCAGGATTCTGCAGGCAGTTGCTGGCTCGGCTGCATGGCT CGCGTGTACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGGAGCTGGGGCAATGTTGGGACTGAGCATGTCTTC TGCAACTTTGGGAACGGTGAGCGGACCAATGCTTGGAGGCGTTCTGTTGGGCTGGTTCGGATACTGGCCAGCTTG GTCTCTACCAATGGTTCTACTAATTCTCGACATGATTGCGCGCTTTGTTCTGATTCAACCCGACCATCTTTTACT AGATTCACCGTCTCTAATCAGACATGCCGAGCGCAGCAAGATATATCATGAAATGGAGGAAACTGTGACGGAAAC GTCCCCTTTCCTGCCACAATCGCCTTCATTTGGCTCAGATACCGCAGCGGAGGAGAAGTCTGACAACGCTGCGGC TACGAAATATCGCAATTACTATACAGTAATGCTCCAACATGCTGGAATGTGGGCAGGCGTTCTGAATACGATGTC CCAAGCTGCACTACGGGCGGCATTCAACGCTACCTTGCCCGTGTATCTTCGGGATACCTTTAATTGGGGCCCATC ATCAGTCGGGGCGATTTTCTTTGCCCTCCAAGTCCCTATAATCTTGTTCTCTCCCATTATTGGCCACCTCCGAGA TCGTGTCGGTACACGATACCCAACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTGATGTGCTATTTGGGCATACC TGGCAGAGACATCTCTCAGGCTAGTGGGAGCCGGACAGGTGAAGAGGTCGCCTTTATCGCGTGCATATGTGGTAT AGGCTTGGTGATGCCATCGGTTCAAGGTGCCGGATCATTTCACATGCGCTGTAAGTTACAGTACTCCGATTTTTT ATATCACGCGGGAAATTCGATTTGAAGGTTAAATACTAAAAGTGAATAGTCCTCCTGGAGGAAGTTGAAAAAGAT GCTCCCACCATGTTTGGCCCCAATGGTGGGCGTGCGAGGTGCTTCGCATTGGTGTCTATCTCGTTTAACCTCGGT CTGGTGCTGGGTCCATTTGTTATTGGATGGCTGTTTGAGCAAGTGGGATACTATTATATGAATATCGCTCTCGGT AGGTCATGGCACGAATCATGTTCCATATGTGCGGCTCTAATAGTATGTACTCTAGGTGCTGCTTGCATGGGGGTG GCGGTGGTGACGTTTATATTCTGTTGA |