© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2900.t1 |
| Gene name | |
| Location | scaffold_015:323583..324511 |
| Strand | - |
| Gene length (bp) | 928 |
| Transcript length (bp) | 717 |
| Coding sequence length (bp) | 717 |
| Protein length (aa) | 239 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10681 | Rot1 | Chaperone for protein-folding within the ER, fungal | 4.3E-96 | 27 | 235 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006458 | 'de novo' protein folding | Yes |
| GO:0005783 | endoplasmic reticulum | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0006457 | protein folding | No |
| GO:0043226 | organelle | No |
| GO:0043229 | intracellular organelle | No |
| GO:0008150 | biological_process | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0043227 | membrane-bounded organelle | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2900.t1 MMAMYFFLGLLLTAVGTSSSSSSASDLEGTWTTKSRQVVTGPGFYDPIGDKFLEPNLTGISYSFSADGHYEEAYY RAIANPQDPSCPKGIMQWQHGTYTVNSDGSVDLTPIAVDGRQLLSDPCQSSTGTYTRYNQTEHFESFAVSVDSYH GVQRLDVKNFDGSPMHPMYLIYKPPQMLPTQTLNPSSSSKSKRQVEGDTGGRFSIKDLVSREKVGDPNNWLWLGI FMTTLGGITFFRS* |
| Coding | >Ani_SJS72_1|g2900.t1 ATGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAGCAGCAGCAGCAGCAGCGCATCT GATCTAGAAGGAACATGGACAACCAAGTCCCGCCAGGTTGTGACAGGTCCGGGCTTTTACGATCCTATTGGTGAT AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAAGCCTACTAT CGTGCCATTGCCAATCCCCAGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTATACCGTA AACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCAGATCCTTGTCAGTCC TCTACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGAGTCGTTTGCTGTCTCGGTAGATTCATACCAT GGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAACCGCCA CAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATACTGGA GGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTGGTATA TTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAG |
| Transcript | >Ani_SJS72_1|g2900.t1 ATGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAGCAGCAGCAGCAGCAGCGCATCT GATCTAGAAGGAACATGGACAACCAAGTCCCGCCAGGTTGTGACAGGTCCGGGCTTTTACGATCCTATTGGTGAT AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAAGCCTACTAT CGTGCCATTGCCAATCCCCAGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTATACCGTA AACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCAGATCCTTGTCAGTCC TCTACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGAGTCGTTTGCTGTCTCGGTAGATTCATACCAT GGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAACCGCCA CAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATACTGGA GGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTGGTATA TTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAG |
| Gene | >Ani_SJS72_1|g2900.t1 ATGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAGCAGCAGCAGCAGCAGCGCATCT GATCTAGAAGGAACATGGACAACCAAGTCCCGCCAGGTTGTGACAGGTCCGGTATGTTTTGCGCCGTGTTGATTG TTTACCAGCCTCGATGGGCCAGCGCTACCTGTTCGCTAACCGTTCAACCTCTGATACTCACAGGGCTTTTACGAT CCTATTGGTGATAAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAA GAAGCCTACTATCGTGCCATTGCCAATCGTTAGTCCCAGAATTCTTGTAACCATGATAGCGCTTGCATTTCCCCG GTTCTGACATGTCATGATCATTAAATAGCCCAGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGT ACCTATACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCAGAT CCTTGTCAGTCCTCTACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGAGGTACTTGGCCTCTGCCCC TTTACTATATGAGAGCTACTGACAGGTATAGTCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCT TGACGTCAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAACCGCCACAGATGTTACCCAC ACAGACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCAT AAAGGATTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTACACT AGGAGGGATCACCTTCTTTCGCTCTTAG |