© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2775.t1 |
| Gene name | |
| Location | scaffold_014:438582..439489 |
| Strand | - |
| Gene length (bp) | 907 |
| Transcript length (bp) | 639 |
| Coding sequence length (bp) | 639 |
| Protein length (aa) | 213 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05529 | Bap31 | Bap31/Bap29 transmembrane region | 4.7E-50 | 1 | 140 |
| PF18035 | Bap31_Bap29_C | Bap31/Bap29 cytoplasmic coiled-coil domain | 1.9E-15 | 164 | 212 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 44 | 63 | 19 |
| 3 | 110 | 132 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 468 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2775.t1 MTLYYSLVFCLLVFEMAVFMGLIIPLPFTVKRKLFAFISQSPIVAKLQYGLKITFIFILILFIDSVNRVYRVQLE LASFGKEGGTMGAAALGTDRMEVQARKFYSQRNMYLCGFTLFLSLILNRTYTMILDVLRLEDRVRLLEGDKKAGG KDSARLAQAGEIGEIGRLKEELAAKDRDIETLKKQCEGLTREYHKLGDQVSGEKDEAPKKDQ* |
| Coding | >Ani_SJS72_1|g2775.t1 ATGACGCTTTACTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCT CTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGA TTAAAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAG CTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCC CGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACT TACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGT AAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAG GACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTG TCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAG |
| Transcript | >Ani_SJS72_1|g2775.t1 ATGACGCTTTACTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCT CTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGA TTAAAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAG CTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCC CGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACT TACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGT AAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAG GACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTG TCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAG |
| Gene | >Ani_SJS72_1|g2775.t1 ATGACGCTTTACTACAGCCTCGTACGTACCGCCATTTGTTGTTGACTCTCCTCGCAATGGCATGGAGTTCGGGAT TGTTGCAGCCTGCCGCCTGCAGCCCCTGACCCGCGCACTCCCGGATCATCAGATAATATGTCGCATCAGCATGTG CTTACAATATGGTAATAGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCTCTT CCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGATTA AAGGTATGCTATTAAACATTGTCTAACATTTGCAATCACTCATCAAGCTATAGATCACATTCATCTTTATCCTCA TCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCA CCATGGGGTATGCTTCCGACGATCCAGGCCCTTTTTAGCATTGCACTGAAACAGTTACTGACCTAGCTTTCGCCA CAGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCCGTCTTGA GGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTG TGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA CCAGTAG |