Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2775.t1
Gene name
Locationscaffold_014:438582..439489
Strand-
Gene length (bp)907
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05529 Bap31 Bap31/Bap29 transmembrane region 4.7E-50 1 140
PF18035 Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain 1.9E-15 164 212

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 63 19
3 110 132 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2775.t1
MTLYYSLVFCLLVFEMAVFMGLIIPLPFTVKRKLFAFISQSPIVAKLQYGLKITFIFILILFIDSVNRVYRVQLE
LASFGKEGGTMGAAALGTDRMEVQARKFYSQRNMYLCGFTLFLSLILNRTYTMILDVLRLEDRVRLLEGDKKAGG
KDSARLAQAGEIGEIGRLKEELAAKDRDIETLKKQCEGLTREYHKLGDQVSGEKDEAPKKDQ*
Coding >Ani_SJS72_1|g2775.t1
ATGACGCTTTACTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCT
CTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGA
TTAAAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAG
CTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCC
CGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACT
TACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGT
AAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAG
GACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTG
TCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAG
Transcript >Ani_SJS72_1|g2775.t1
ATGACGCTTTACTACAGCCTCGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCT
CTTCCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGA
TTAAAGATCACATTCATCTTTATCCTCATCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAG
CTGGCTTCCTTCGGCAAAGAGGGAGGCACCATGGGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCC
CGGAAGTTCTACTCGCAGCGCAACATGTACCTCTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACT
TACACCATGATCCTTGACGTCCTCCGTCTTGAGGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGT
AAGGACTCCGCTCGTCTTGCGCAGGCCGGTGAAATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAG
GACCGTGACATTGAGACCCTGAAGAAGCAGTGTGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTG
TCTGGTGAGAAGGATGAGGCTCCCAAGAAGGACCAGTAG
Gene >Ani_SJS72_1|g2775.t1
ATGACGCTTTACTACAGCCTCGTACGTACCGCCATTTGTTGTTGACTCTCCTCGCAATGGCATGGAGTTCGGGAT
TGTTGCAGCCTGCCGCCTGCAGCCCCTGACCCGCGCACTCCCGGATCATCAGATAATATGTCGCATCAGCATGTG
CTTACAATATGGTAATAGGTTTTCTGCCTCTTGGTGTTTGAGATGGCGGTCTTCATGGGCCTCATCATCCCTCTT
CCATTCACCGTGAAGAGGAAGCTCTTCGCTTTCATTTCGCAAAGTCCGATAGTAGCTAAATTACAATATGGATTA
AAGGTATGCTATTAAACATTGTCTAACATTTGCAATCACTCATCAAGCTATAGATCACATTCATCTTTATCCTCA
TCCTCTTCATCGATAGTGTCAACCGCGTATACCGTGTGCAGCTGGAGCTGGCTTCCTTCGGCAAAGAGGGAGGCA
CCATGGGGTATGCTTCCGACGATCCAGGCCCTTTTTAGCATTGCACTGAAACAGTTACTGACCTAGCTTTCGCCA
CAGAGCCGCCGCTCTCGGTACCGATCGCATGGAAGTCCAAGCCCGGAAGTTCTACTCGCAGCGCAACATGTACCT
CTGTGGATTCACCCTCTTCCTGTCTCTTATCCTCAATCGCACTTACACCATGATCCTTGACGTCCTCCGTCTTGA
GGACAGAGTCAGACTCCTTGAGGGTGACAAGAAGGCTGGCGGTAAGGACTCCGCTCGTCTTGCGCAGGCCGGTGA
AATCGGTGAAATCGGCCGTCTGAAGGAGGAGCTTGCAGCCAAGGACCGTGACATTGAGACCCTGAAGAAGCAGTG
TGAGGGTCTCACCCGCGAATATCACAAGCTTGGTGATCAGGTGTCTGGTGAGAAGGATGAGGCTCCCAAGAAGGA
CCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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