Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2680.t1
Gene name
Locationscaffold_014:91045..91480
Strand+
Gene length (bp)435
Transcript length (bp)282
Coding sequence length (bp)282
Protein length (aa) 94

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01679 Pmp3 Proteolipid membrane potential modulator 3.1E-21 8 55

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 36 58 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2680.t1
MAGTCSMLCLILITLFIPPLGVFMISGCSVDLLINILLTILGYLPGHVHAFYLEYVYYANRNAGTGDAPRRAPGV
YSERIQRGGHHTTYGTIP*
Coding >Ani_SJS72_1|g2680.t1
ATGGCCGGCACATGCTCCATGCTCTGCTTGATTCTTATCACGTTGTTCATACCTCCTCTCGGTGTGTTTATGATC
TCGGGTTGCAGTGTTGACCTACTTATCAATATACTCTTGACGATTCTCGGGTACCTGCCCGGCCATGTCCACGCA
TTCTATCTCGAATACGTATACTACGCCAACCGCAACGCAGGGACCGGTGATGCACCACGTCGGGCGCCGGGAGTA
TATTCCGAGAGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCGTGA
Transcript >Ani_SJS72_1|g2680.t1
ATGGCCGGCACATGCTCCATGCTCTGCTTGATTCTTATCACGTTGTTCATACCTCCTCTCGGTGTGTTTATGATC
TCGGGTTGCAGTGTTGACCTACTTATCAATATACTCTTGACGATTCTCGGGTACCTGCCCGGCCATGTCCACGCA
TTCTATCTCGAATACGTATACTACGCCAACCGCAACGCAGGGACCGGTGATGCACCACGTCGGGCGCCGGGAGTA
TATTCCGAGAGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCGTGA
Gene >Ani_SJS72_1|g2680.t1
ATGGCCGGCACATGCTCCATGCTCTGCTTGATTCTTATCACGTTGTTCAGTATGCAGCCCCTCTCTTGAATACTG
ACCCTGTCCTATTCTGAAGCTGAAGCTAATACTCTTGGTTCTCTAGTACCTCCTCTCGGTGTGTTTATGATCTCG
GGTTGCAGTGTTGACCTACTTATCAATATACTCTTGACGATTCTCGGGTTCGTTCCAGCCATACTCCTTCTTGCC
TTCGCAGGATTACCCTGAAGTGAATAGTTTCTGACTGAGTCCACTTTGTGCAGGTACCTGCCCGGCCATGTCCAC
GCATTCTATCTCGAATACGTATACTACGCCAACCGCAACGCAGGGACCGGTGATGCACCACGTCGGGCGCCGGGA
GTATATTCCGAGAGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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