Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g2677.t1
Gene name
Location	scaffold_014:81677..82619
Strand	-
Gene length (bp)	942
Transcript length (bp)	633
Coding sequence length (bp)	633
Protein length (aa)	211

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01105	EMP24_GP25L	emp24/gp25L/p24 family/GOLD	4.3E-46	22	203

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 21	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	176	198	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g2677.t1 MRFAALVIGLLATFVSSVAATALTYRLEANEKACFYNYVDQRNVKLAFYFAVQSGGSFDIDYSVVGPGEKVVLDG TKERQGDFVFTAQSIGEYRFCFNNDMSTFAEKIVDFEIAVENEERAQLPSRQGASPEQASALEESIFKLSAQLST ITRNQKYFRTRENRNFSTVRSTERRIFNFSVIEGLMMVSMAALQVFVVRFFFQGARKGYV*
Coding	>Ani_SJS72_1\|g2677.t1 ATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTCCGTGGCCGCTACGGCCCTGACCTAC CGCCTCGAGGCCAACGAGAAGGCTTGTTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTT GCTGTCCAATCCGGCGGTTCCTTCGATATCGACTACTCCGTTGTCGGACCCGGCGAAAAGGTGGTCCTGGATGGC ACCAAGGAAAGACAGGGCGATTTTGTGTTCACGGCCCAAAGCATTGGCGAGTACCGGTTCTGCTTCAACAATGAT ATGTCGACTTTTGCGGAGAAGATTGTCGATTTCGAGATCGCGGTCGAGAACGAAGAACGCGCACAGTTGCCCTCC CGCCAGGGTGCTAGCCCCGAGCAGGCCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCTCCACC ATCACCCGCAACCAGAAGTACTTCCGCACGAGAGAGAACCGGAACTTCAGCACCGTTCGTAGTACGGAGCGTCGT ATTTTCAACTTCAGCGTGATTGAGGGCTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTC TTCTTCCAGGGTGCCAGAAAAGGTTACGTGTGA
Transcript	>Ani_SJS72_1\|g2677.t1 ATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTCCGTGGCCGCTACGGCCCTGACCTAC CGCCTCGAGGCCAACGAGAAGGCTTGTTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTT GCTGTCCAATCCGGCGGTTCCTTCGATATCGACTACTCCGTTGTCGGACCCGGCGAAAAGGTGGTCCTGGATGGC ACCAAGGAAAGACAGGGCGATTTTGTGTTCACGGCCCAAAGCATTGGCGAGTACCGGTTCTGCTTCAACAATGAT ATGTCGACTTTTGCGGAGAAGATTGTCGATTTCGAGATCGCGGTCGAGAACGAAGAACGCGCACAGTTGCCCTCC CGCCAGGGTGCTAGCCCCGAGCAGGCCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCTCCACC ATCACCCGCAACCAGAAGTACTTCCGCACGAGAGAGAACCGGAACTTCAGCACCGTTCGTAGTACGGAGCGTCGT ATTTTCAACTTCAGCGTGATTGAGGGCTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTC TTCTTCCAGGGTGCCAGAAAAGGTTACGTGTGA
Gene	>Ani_SJS72_1\|g2677.t1 ATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTCCGTGGCCGCTACGGCCCTGACCTAC CGCCTCGAGGCCAACGAGAAGGCTTGTTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTT GCTGTGAGTCCTCCTATTTCGCATCTAACTCCCCAATGCGGGAATGTCCATTAATCGGCGTTTCAATTCTGGCTT TGTAGGTCCAATCCGGCGGTTCCTTCGATATCGACTACTCCGTTGTCGGACCCGGCGAAAAGGTGGTCCTGGATG GCACCAAGGAAAGACAGGGCGATTTTGTGTTCACGGCCCAAAGCATTGGCGAGTACCGGTTCTGCTTCAACAATG ATATGTCGACTTTTGCGGAGAAGATTGTCGATTTCGAGATCGCGGTATGTTTTGTTTGTTTTGGTCACCCATTAT CACATCGGCAACCTCACAGACCCTTTGGGGTGGTATATTACAAAGTAATGTAGTAGGGATTGAGACTAATTACGT ACGTGTGTGCGCGGTGTCTACAGGTCGAGAACGAAGAACGCGCACAGTTGCCCTCCCGCCAGGGTGCTAGCCCCG AGCAGGCCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCTCCACCATCACCCGCAACCAGAAGT ACTTCCGCACGAGAGAGAACCGGAACTTCAGCACCGTTCGTAGTACGGAGCGTCGTATTTTCAACTTCAGCGTGA TTGAGGGCTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTCTTCTTCCAGGGTGCCAGAA AAGGTAAGTGCCGATGTCTTTTTACACTTGAGTTCCGAGGGTTTCAGTTGCTATGTGTTATGCCCCGTTTGGTAA TGGGGCCGATGGAGCTGATTAATTGATACAGGTTACGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail