Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2621.t1
Gene name
Locationscaffold_013:368888..370128
Strand-
Gene length (bp)1240
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20237 DUF6594 Family of unknown function (DUF6594) 3.8E-56 9 268

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 201 223 22
2 227 249 22
3 256 273 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2621.t1
MSTPISKGYDRLAALMARDPGSSIYRSFSKLNAKNLLYLQAEIAYIQIDLQDIIEEDGQSEDKVSFPFSVWDMKN
SEDPVQWEKVLEARKLLKEYNTALLQQAQLLRLNAPEKADLEVFQAWLKEEESRNMWFSPPDQWRGENESDLVAL
NSRHEETDRFTRFVYTRVLSWFHRMVGVKDTKRKDIESGVWYYNDRTIKSWTYILSLIISGLLPATSMIVLYFLK
DPAAILITICVYDMVFVLVMGLMVKARRVEIFAAATAFAAVQVTMITAGKSNT*
Coding >Ani_SJS72_1|g2621.t1
ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCCGGGTCCTCCATCTAT
CGAAGTTTTTCCAAGCTTAATGCAAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC
CAAGATATCATCGAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGACATGAAGAAT
TCAGAGGATCCGGTTCAATGGGAGAAGGTCCTCGAAGCACGCAAGTTATTGAAAGAGTATAACACAGCCCTACTC
CAACAAGCTCAACTCCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCCAAGCGTGGCTGAAAGAA
GAAGAAAGCAGAAATATGTGGTTTTCGCCCCCAGACCAATGGCGCGGAGAGAACGAGAGCGACTTGGTAGCATTG
AACAGTCGACATGAGGAGACGGATCGTTTCACCCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGATG
GTGGGGGTCAAGGATACCAAACGAAAAGATATCGAATCTGGCGTCTGGTACTATAATGACCGTACAATCAAATCT
TGGACGTATATACTCAGTTTGATTATCTCAGGGTTGCTTCCTGCAACCTCGATGATTGTGTTGTATTTCCTGAAA
GATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTGTTTGTTCTGGTAATGGGGTTGATGGTTAAG
GCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTTCGCTGCCGTGCAGGTGACTATGATCACGGCTGGTAAG
AGCAATACGTGA
Transcript >Ani_SJS72_1|g2621.t1
ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCCGGGTCCTCCATCTAT
CGAAGTTTTTCCAAGCTTAATGCAAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC
CAAGATATCATCGAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGACATGAAGAAT
TCAGAGGATCCGGTTCAATGGGAGAAGGTCCTCGAAGCACGCAAGTTATTGAAAGAGTATAACACAGCCCTACTC
CAACAAGCTCAACTCCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCCAAGCGTGGCTGAAAGAA
GAAGAAAGCAGAAATATGTGGTTTTCGCCCCCAGACCAATGGCGCGGAGAGAACGAGAGCGACTTGGTAGCATTG
AACAGTCGACATGAGGAGACGGATCGTTTCACCCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGATG
GTGGGGGTCAAGGATACCAAACGAAAAGATATCGAATCTGGCGTCTGGTACTATAATGACCGTACAATCAAATCT
TGGACGTATATACTCAGTTTGATTATCTCAGGGTTGCTTCCTGCAACCTCGATGATTGTGTTGTATTTCCTGAAA
GATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTGTTTGTTCTGGTAATGGGGTTGATGGTTAAG
GCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTTCGCTGCCGTGCAGGTGACTATGATCACGGCTGGTAAG
AGCAATACGTGA
Gene >Ani_SJS72_1|g2621.t1
ATGTCGACTCCCATATCCAAAGGCTACGATAGACTGGCCGCTCTAATGGCCCGCGACCCCGGGTCCTCCATCTAT
CGAAGTTTTTCCAAGCTTAATGCAAAGAACCTGCTCTATCTTCAGGCAGAGATTGCCTACATTCAAATTGACCTC
CAAGATATCATCGAAGAGGACGGTCAATCCGAGGATAAAGTCTCATTCCCGTTCTCAGTCTGGGACATGAAGAAT
TCAGAGGATCCGGTTCAATGGGAGAAGGTCCTCGAAGCACGCAAGTTATTGAAAGAGTATAGTACGTCCCCAATC
TTCCTTTCTTTTTTCTATCTTGAAAGCCATGTTGTATACTTTCTCGTCAATGTTTAGTCTCCTACATCCAGTCCT
CCCCCTTCAGAACTTTCGCAAAAGCTTGGTCGGCCACCACGGAAGCACCGTGGTTGCTAATAATCATATATACAA
ATAATAACTTTCAATTTATCCTACTGCAAACATTTCACTAACAGGATTAAATTGTAGACACAGCCCTACTCCAAC
AAGCTCAACTCCTCCGACTCAACGCGCCCGAGAAAGCCGACCTAGAGGTGTTCCAAGCGTGGCTGAAAGAAGAAG
AAAGCAGAAATATGTGGTTTTCGCCCCCAGACCAATGGCGCGGAGAGAACGAGAGCGACTTGGTAGCATTGAACA
GTCGACATGAGGAGACGGATCGTTTCACCCGTTTTGTCTATACACGAGTCCTTTCGTGGTTCCATCGGATGGTGG
GGGTCAAGGATACCGTACGTTATGCTTTTCGTACCGTGTCATTGAGCTCTGCCCTGATAGTAACTAACCTTGTCA
CTAACGCACACATTCTACACCAGAAACGAAAAGATATCGAATCTGGCGTCTGGTACTATAATGACCGTACAATCA
AATCTTGGACGTATATACTCAGTTTGATTATCTCAGGGTTGCTTCCTGCAACCTCGATGATTGTGTTGTATTTCC
TGAAAGATCCGGCGGCAATATTAATCACTATCTGCGTGTATGATATGGTGTTTGTTCTGGTAATGGGGTTGATGG
TTAAGGCGAGACGCGTGGAGATCTTTGCTGCCGCCACAGCGTAGGTTACCCTCAGATTCAGATTCTGTCCTCTCT
CTCCTTTGCCTCCGTTTCCTCGTGAAATATGGCGCTTGATTTGCTTTGCACTAACGGGACTAGGTTCGCTGCCGT
GCAGGTGACTATGATCACGGCTGGTAAGAGCAATACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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