Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2541.t1
Gene name
Locationscaffold_013:118584..119083
Strand+
Gene length (bp)499
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01042 Ribonuc_L-PSP Endoribonuclease L-PSP 5.3E-10 21 142

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2541.t1
MASFKYHALPGFGEECREKYGFSDACIIGNRLVVTGQTGMNPLTRETSPKIEEQIAQAFNNINDLIIHTLVQEGH
AIEENSTGWDYVVKLRAFFVGLSGMRVEARENMVHYIKKWCPRHQPLFTMVGIESLPFPEHLVEFEVGVWIP*
Coding >Ani_SJS72_1|g2541.t1
ATGGCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAAATACGGGTTCAGCGATGCC
TGCATCATCGGCAATCGGCTGGTCGTCACTGGGCAGACGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAA
ATTGAGGAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTGATCATCCACACTCTCGTTCAAGAAGGTCAT
GCCATTGAGGAGAATAGTACTGGCTGGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATG
CGCGTGGAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCATCAGCCGTTGTTCACCATG
GTAGGAATCGAAAGCCTGCCTTTTCCCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAA
Transcript >Ani_SJS72_1|g2541.t1
ATGGCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAAATACGGGTTCAGCGATGCC
TGCATCATCGGCAATCGGCTGGTCGTCACTGGGCAGACGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAA
ATTGAGGAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTGATCATCCACACTCTCGTTCAAGAAGGTCAT
GCCATTGAGGAGAATAGTACTGGCTGGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATG
CGCGTGGAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCATCAGCCGTTGTTCACCATG
GTAGGAATCGAAAGCCTGCCTTTTCCCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAA
Gene >Ani_SJS72_1|g2541.t1
ATGGCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAAATACGGGTTCAGCGATGCC
TGCATCATCGGCAATCGGCTGGTCGTCACTGGGCAGAGTAAGCAGTGTACCGGAACCACGTCTGAGGACCCAGGG
CTAATCAGATTGCAAAGCGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAAATTGAGGAGCAAATTGCGCA
GGCCTTCAACAACATCAATGACCTGATCATCCACACTCTCGTTCAAGAAGGTCATGCCATTGAGGAGAATAGTAC
TGGCTGGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATGCGCGTGGAAGCACGGGAGAA
TATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCATCAGCCGTTGTTCACCATGGTAGGAATCGAAAGCCTGCC
TTTTCCCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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