© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2536.t1 |
| Gene name | |
| Location | scaffold_013:107896..108880 |
| Strand | - |
| Gene length (bp) | 984 |
| Transcript length (bp) | 924 |
| Coding sequence length (bp) | 924 |
| Protein length (aa) | 308 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 1.6E-13 | 8 | 224 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 2.7E-11 | 12 | 150 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2536.t1 MSRQIKNVVIAGATGNLGSYILTALVNHGSFNITVLTRKNGVSFPTGVTAKVVDFSSPAELGLALQGQDAVVDAI LSPNPTVSIGLIDAAVAAGVYRYIAPEFTIHPKYDKTRSLPIFRGKAQIYDHLQKVANDQKITWTAISNGAFLDW CLRSGFLNIDLIKKKILLMNDGTRVFPLTVLPAVGTAVANALAQAEKTKNMHCSIYGVQKSQKEIADLAKEALGP DGWEVESQDMEKAFEEALSATAIGNYSWTVVGDLIRYSLATPGYNGVFEENHNDLLGVQPMSGEQVKALIKEIYD ELKCAPH* |
| Coding | >Ani_SJS72_1|g2536.t1 ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGCCACCGGAAACCTTGGATCGTATATCCTTACCGCATTG GTGAACCATGGCAGCTTTAATATTACCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGGCGTCACGGCC AAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCGCTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATC TTGAGTCCCAACCCTACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCGCTACATCGCC CCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGTCACTGCCCATCTTCCGGGGCAAGGCGCAGATCTAT GATCATCTCCAGAAGGTCGCCAATGATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTTTCTGGACTGG TGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGAAAAAGATTCTGCTCATGAACGATGGTACCCGTGTC TTCCCTTTGACCGTTCTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAAAACCAAGAAT ATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAGAGATTGCCGATCTGGCAAAGGAAGCACTTGGACCC GACGGCTGGGAGGTCGAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGCTATTGGAAAC TACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCACTCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAG AATCACAATGATCTATTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGAAATCTACGAT GAGCTGAAGTGTGCTCCACACTAG |
| Transcript | >Ani_SJS72_1|g2536.t1 ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGCCACCGGAAACCTTGGATCGTATATCCTTACCGCATTG GTGAACCATGGCAGCTTTAATATTACCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGGCGTCACGGCC AAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCGCTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATC TTGAGTCCCAACCCTACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCGCTACATCGCC CCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGTCACTGCCCATCTTCCGGGGCAAGGCGCAGATCTAT GATCATCTCCAGAAGGTCGCCAATGATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTTTCTGGACTGG TGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGAAAAAGATTCTGCTCATGAACGATGGTACCCGTGTC TTCCCTTTGACCGTTCTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAAAACCAAGAAT ATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAGAGATTGCCGATCTGGCAAAGGAAGCACTTGGACCC GACGGCTGGGAGGTCGAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGCTATTGGAAAC TACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCACTCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAG AATCACAATGATCTATTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGAAATCTACGAT GAGCTGAAGTGTGCTCCACACTAG |
| Gene | >Ani_SJS72_1|g2536.t1 ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGTAGGTTGGAACTTCTAATCGTAATGACTTTCAAGACAT GCCACTAATCCATAATCTCAGGCCACCGGAAACCTTGGATCGTATATCCTTACCGCATTGGTGAACCATGGCAGC TTTAATATTACCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGGCGTCACGGCCAAGGTGGTGGATTTC AGCTCTCCCGCGGAATTAGGGCTCGCTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATCTTGAGTCCCAACCCT ACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCGCTACATCGCCCCTGAGTTCACCATC CATCCTAAGTACGACAAGACACGGTCACTGCCCATCTTCCGGGGCAAGGCGCAGATCTATGATCATCTCCAGAAG GTCGCCAATGATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTTTCTGGACTGGTGTCTGCGATCGGGC TTTTTGAATATTGACTTGATCAAGAAAAAGATTCTGCTCATGAACGATGGTACCCGTGTCTTCCCTTTGACCGTT CTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAAAACCAAGAATATGCACTGCTCTATC TACGGTGTTCAGAAGAGTCAAAAAGAGATTGCCGATCTGGCAAAGGAAGCACTTGGACCCGACGGCTGGGAGGTC GAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGCTATTGGAAACTACAGCTGGACGGTT GTGGGAGACTTAATCCGGTATTCACTCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAGAATCACAATGATCTA TTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGAAATCTACGATGAGCTGAAGTGTGCT CCACACTAG |