Protein ID | Ani_SJS72_1|g2520.t1 |
Gene name | |
Location | scaffold_013:43666..44815 |
Strand | - |
Gene length (bp) | 1149 |
Transcript length (bp) | 1083 |
Coding sequence length (bp) | 1083 |
Protein length (aa) | 361 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10067 | DUF2306 | Predicted membrane protein (DUF2306) | 3.5E-14 | 86 | 199 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 30 | 52 | 22 |
2 | 85 | 107 | 22 |
3 | 120 | 137 | 17 |
4 | 147 | 169 | 22 |
5 | 182 | 199 | 17 |
6 | 272 | 294 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g2520.t1 MVKVDRPPANNFVATARKIYNPIGFAKGYNFILWMISAGALLGFSLARLMYLDFDNIFCPADQNKANALPGECFY YQDTRGRVGILLHLGAILPACLLAFLQFVPAIRHKVILFHRINGYLVIIGSFTGMAGVLMIAEHSFGGGLSIQIA LGLALIIFLSCICIAYHNIKRLQIEQHRAWMIRAWVVGGFIITMRIIGITTDKVLVALSPEQYFVSYSCSEISFM LNGNQSVLQSLHPSCTGANPNHHVLVNAFSANGTGNVDQAAAGLDISFSAAAWLAVAIHVFAAELYLHLTPAESA RLRRVSYQRQLEAGMRWPGNAGLTAERVGDAEPFLMVKGVERSESGSEVVLAGRRGDGRD* |
Coding | >Ani_SJS72_1|g2520.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTTGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGGGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTCGACTTCGACAACATCTTCTGTCCCGCAGACCAGAACAAAGCCAATGCTCTTCCCGGCGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCGGCCTGTCTTCTCGCCTTC CTTCAATTCGTCCCCGCCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCCTTCACCGGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGCGGCGGCCTGAGCATACAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTCAGCTGTATCTGCATCGCTTACCATAACATCAAACGACTCCAGATCGAG CAGCACCGGGCATGGATGATCCGCGCTTGGGTCGTGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACA ACAGACAAAGTCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTATCCTACTCCTGCTCCGAGATCTCCTTCATG CTGAACGGAAACCAATCCGTCCTGCAATCCCTCCACCCATCCTGCACCGGCGCTAATCCGAACCACCATGTTCTC GTCAACGCATTCAGCGCCAACGGCACCGGGAACGTTGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCT GCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCG AGGCTGAGGCGTGTGTCGTATCAGAGGCAGTTGGAGGCGGGGATGAGATGGCCTGGGAATGCGGGGTTGACGGCG GAGAGGGTTGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGGTGGTA TTGGCTGGTAGGAGGGGGGATGGGAGGGATTAG |
Transcript | >Ani_SJS72_1|g2520.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTTGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGGGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTCGACTTCGACAACATCTTCTGTCCCGCAGACCAGAACAAAGCCAATGCTCTTCCCGGCGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCGGCCTGTCTTCTCGCCTTC CTTCAATTCGTCCCCGCCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCCTTCACCGGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGCGGCGGCCTGAGCATACAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTCAGCTGTATCTGCATCGCTTACCATAACATCAAACGACTCCAGATCGAG CAGCACCGGGCATGGATGATCCGCGCTTGGGTCGTGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACA ACAGACAAAGTCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTATCCTACTCCTGCTCCGAGATCTCCTTCATG CTGAACGGAAACCAATCCGTCCTGCAATCCCTCCACCCATCCTGCACCGGCGCTAATCCGAACCACCATGTTCTC GTCAACGCATTCAGCGCCAACGGCACCGGGAACGTTGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCT GCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCG AGGCTGAGGCGTGTGTCGTATCAGAGGCAGTTGGAGGCGGGGATGAGATGGCCTGGGAATGCGGGGTTGACGGCG GAGAGGGTTGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGGTGGTA TTGGCTGGTAGGAGGGGGGATGGGAGGGATTAG |
Gene | >Ani_SJS72_1|g2520.t1 ATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTTGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTC GCCAAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGGGCACTCCTCGGCTTCTCTCTCGCGCGTCTGATG TACCTCGACTTCGACAACATCTTCTGTCCCGCAGACCAGAACAAAGCCAATGCTCTTCCCGGCGAATGCTTCTAC TACCAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCGGCCTGTCTTCTCGCCTTC CTTCAATTCGTCCCCGCCATCCGCCACAAAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGC TCCTTCACCGGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGCGGCGGCCTGAGCATACAAATCGCC CTCGGCTTAGCGCTCATCATCTTCCTCAGCTGTATCTGCATCGCTTACCATAACATCAAACGACTCCAGATCGAG CAGCACCGGGCATGGATGATCCGCGCTTGGGTCGTGGTTAGTACCCCCTTCCCCACCCCATCCCCTATTCTTTTT TTCCGCCCTAAATCCTGAACCCTATAGGGCGGCTTCATCATAACCATGCGCATCATCGGCATCACAACAGACAAA GTCCTCGTGGCCCTCAGCCCAGAACAATACTTCGTATCCTACTCCTGCTCCGAGATCTCCTTCATGCTGAACGGA AACCAATCCGTCCTGCAATCCCTCCACCCATCCTGCACCGGCGCTAATCCGAACCACCATGTTCTCGTCAACGCA TTCAGCGCCAACGGCACCGGGAACGTTGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCTGCGGCGTGG CTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCGAGGCTGAGG CGTGTGTCGTATCAGAGGCAGTTGGAGGCGGGGATGAGATGGCCTGGGAATGCGGGGTTGACGGCGGAGAGGGTT GGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGGTGGTATTGGCTGGT AGGAGGGGGGATGGGAGGGATTAG |