Protein ID | Ani_SJS72_1|g2429.t1 |
Gene name | |
Location | scaffold_012:229711..232579 |
Strand | - |
Gene length (bp) | 2868 |
Transcript length (bp) | 2805 |
Coding sequence length (bp) | 2805 |
Protein length (aa) | 935 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00924 | MS_channel | Mechanosensitive ion channel | 5.9E-23 | 501 | 689 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 163 | 185 | 22 |
2 | 192 | 214 | 22 |
3 | 287 | 309 | 22 |
4 | 505 | 527 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g2429.t1 MSTSMGEHLSPDHPEEKSKHRYDDGTPDSDEGTYVYDSSSNGHHLRVDTSYNDLDRTALCSPVTAREESTRLEDD LAVMEAERMVSRSTQEAESKKSVNGGRTSTSRSRSRSRSRPNEHVDEFDEATNPLHEKAAVYNPPENPNTNIARF VKKLHESSFIIRYLTYIVPLVIVLLIPLLVGALAYPDASVGGVRLVWFSVWLEIVWLTLWAGRIVSKLIPIPVNA LASIFTNNAKKWRDLAKQLELHATLFFWWLGVEISFLPTMKNHHVDGNHTTRSWENTLNKIIISVFVWTILNLVE KFIIQLIAISFHTRTYADRIEINKFQIGSLTKLYEFSRRKITAKDKEFEEQKQPGSNNGLKIPFHYAGKAGRLAK GAFTKVGDVAGAVAADFTGRTATNSNHPYQVVLALLRTTSGCQVLARRLYRTLVRDGFETVFSGDLKEAFDNNDE AEAAFTMFDKDMNGDISMEELESVCVEIGRERKAITASLKDLDSVVGRLDNVLEFFVIVIALIVFLTLISTSAAG VLTSAGSSILALSWLFSATAQEFLQSVIFVFIKHPFDVGDRVTVYGNSGDSGLGDDYFVKQISLLYTEFKKMQGH VVQAPNSYLNGLFILNQRRSGALAEAVPIVIKYGTTLEQIDGLRQRLLEFVRSERREFQTNILTEMREVTENFSV TLNVVFFYKSNWQNEGLRLQRRNKFICMLMLALQEIGIEGPRMNLQGARVDIPFHVAGFPSHNMGAPPGSSDGRP PPTPVHQHDSLPENMGTSSSVRQHSILRKGADAAAARARGDSMLTRKHVDFSLGMRDVSSGDVMGDVFEDRRTRV DDVVRMANRETAERRIQEEEEEQAERQSRASTSHRRSHSNTSAAPSAARSGRQSMESQGGHSLSSVSRGRFFRHR NSISSRDPADLEQGQSHGQQSPQIRAVSPAMDEK* |
Coding | >Ani_SJS72_1|g2429.t1 ATGTCGACCTCTATGGGAGAGCATCTTTCTCCTGATCATCCGGAAGAGAAGAGCAAGCACAGATACGACGATGGC ACTCCTGACTCTGACGAAGGAACCTACGTCTATGACAGTTCTAGTAATGGACACCACCTGAGGGTGGACACTTCT TACAATGACTTGGATAGGACCGCCCTGTGTTCTCCTGTCACTGCGAGAGAAGAATCTACGCGTCTAGAAGACGAC CTGGCAGTTATGGAGGCTGAACGGATGGTTTCGCGCTCCACCCAAGAGGCAGAGTCGAAAAAGAGTGTTAACGGC GGCCGTACATCCACCTCCCGCTCTCGTTCACGTTCTCGCTCGCGCCCGAACGAACATGTCGACGAGTTTGATGAG GCCACTAATCCGCTGCATGAGAAAGCTGCAGTCTACAACCCACCCGAGAATCCCAATACCAACATTGCCAGATTC GTCAAGAAACTCCACGAATCTAGTTTCATCATCCGTTACCTTACCTACATCGTGCCCCTTGTGATCGTCCTATTA ATTCCGTTGTTGGTTGGCGCGCTGGCATATCCTGATGCCAGTGTCGGAGGTGTCCGGTTGGTCTGGTTTTCTGTC TGGTTGGAAATTGTCTGGTTGACATTGTGGGCTGGAAGAATTGTTTCCAAGTTAATACCTATACCTGTGAATGCG CTCGCCAGTATCTTTACCAACAATGCAAAGAAATGGCGTGATCTTGCCAAGCAATTGGAACTGCATGCGACCCTT TTCTTCTGGTGGTTGGGTGTCGAAATTTCTTTCCTCCCTACGATGAAGAATCATCACGTGGACGGAAACCATACG ACGCGCTCCTGGGAAAACACGCTCAACAAGATCATCATTTCCGTCTTCGTTTGGACGATCCTCAACCTGGTGGAG AAGTTCATTATTCAGCTGATCGCTATCAGCTTCCACACACGTACTTATGCCGATAGAATTGAGATCAACAAGTTC CAGATTGGCAGCTTGACCAAACTATACGAATTCTCGCGGAGGAAAATTACTGCCAAGGACAAGGAATTTGAGGAG CAAAAGCAGCCCGGCTCTAACAACGGCCTCAAGATCCCGTTCCACTACGCTGGTAAAGCGGGGCGTCTTGCTAAG GGTGCCTTCACCAAGGTTGGTGATGTTGCTGGTGCAGTTGCAGCGGACTTCACTGGTCGTACGGCTACCAACAGC AACCACCCTTACCAGGTTGTGCTGGCTTTGCTGCGAACCACGAGCGGTTGCCAGGTTTTGGCTCGGCGACTCTAC CGGACTCTCGTGCGGGATGGCTTTGAGACCGTTTTCTCTGGCGATCTGAAGGAGGCGTTTGATAACAATGACGAA GCCGAGGCTGCCTTTACCATGTTCGACAAGGACATGAACGGAGATATTTCAATGGAGGAATTGGAGTCTGTGTGC GTGGAAATCGGACGCGAACGCAAAGCCATCACTGCGTCTCTGAAAGACCTTGATTCTGTTGTCGGAAGACTTGAC AACGTACTGGAATTCTTCGTGATTGTCATTGCCCTGATCGTTTTCTTGACCCTGATTTCCACCTCGGCTGCCGGC GTACTCACGTCTGCAGGCTCCAGTATCCTTGCGCTGTCTTGGCTGTTCTCTGCCACTGCACAGGAGTTCCTTCAG TCGGTCATTTTCGTCTTCATCAAGCACCCGTTTGATGTTGGTGACCGCGTAACAGTTTATGGTAACTCAGGTGAT TCCGGCCTTGGTGATGACTACTTCGTCAAGCAGATTTCCCTCTTGTATACCGAGTTCAAGAAGATGCAGGGTCAC GTTGTTCAAGCCCCGAACAGCTATCTGAACGGTCTCTTCATTCTCAACCAGCGCAGATCAGGTGCCCTGGCCGAG GCTGTTCCTATTGTCATCAAGTATGGCACGACACTCGAGCAAATTGATGGTCTTCGCCAACGGTTGTTGGAATTT GTCCGCAGCGAACGCCGCGAATTCCAGACTAACATCCTCACTGAGATGCGTGAGGTGACTGAAAACTTCTCAGTC ACCCTCAATGTTGTCTTCTTCTACAAGTCCAACTGGCAAAATGAGGGCTTGCGTTTGCAACGTCGCAATAAGTTC ATCTGCATGCTGATGCTTGCCTTGCAAGAGATTGGCATCGAAGGCCCACGCATGAACCTCCAGGGTGCCCGTGTC GACATTCCCTTCCATGTCGCCGGGTTCCCTTCGCATAACATGGGCGCTCCTCCCGGCAGCAGTGATGGCCGGCCT CCTCCCACCCCTGTCCACCAGCACGATTCGCTCCCCGAAAATATGGGCACCAGCAGCTCTGTCCGCCAGCATTCT ATCCTTCGCAAGGGCGCGGACGCCGCCGCTGCCCGGGCCCGTGGTGACTCGATGCTCACGCGAAAGCATGTCGAC TTCTCTCTGGGCATGCGCGACGTTTCTTCCGGCGACGTTATGGGTGATGTGTTTGAAGACCGCCGCACTCGTGTG GATGACGTTGTCCGGATGGCCAACCGTGAAACCGCGGAGCGTCGCATCCAGGAAGAAGAGGAAGAGCAAGCCGAG CGGCAGAGCCGTGCATCTACCTCTCACCGCCGAAGCCACTCCAACACCAGCGCCGCCCCGTCTGCGGCGCGCTCC GGTCGCCAGTCAATGGAATCCCAGGGTGGTCACAGTTTGTCCTCTGTCAGTCGCGGCCGATTCTTCCGTCATCGC AACAGCATCAGCAGCCGCGACCCAGCTGATCTGGAGCAAGGGCAATCCCATGGCCAGCAGTCGCCTCAGATCCGC GCCGTGTCGCCCGCTATGGACGAGAAATGA |
Transcript | >Ani_SJS72_1|g2429.t1 ATGTCGACCTCTATGGGAGAGCATCTTTCTCCTGATCATCCGGAAGAGAAGAGCAAGCACAGATACGACGATGGC ACTCCTGACTCTGACGAAGGAACCTACGTCTATGACAGTTCTAGTAATGGACACCACCTGAGGGTGGACACTTCT TACAATGACTTGGATAGGACCGCCCTGTGTTCTCCTGTCACTGCGAGAGAAGAATCTACGCGTCTAGAAGACGAC CTGGCAGTTATGGAGGCTGAACGGATGGTTTCGCGCTCCACCCAAGAGGCAGAGTCGAAAAAGAGTGTTAACGGC GGCCGTACATCCACCTCCCGCTCTCGTTCACGTTCTCGCTCGCGCCCGAACGAACATGTCGACGAGTTTGATGAG GCCACTAATCCGCTGCATGAGAAAGCTGCAGTCTACAACCCACCCGAGAATCCCAATACCAACATTGCCAGATTC GTCAAGAAACTCCACGAATCTAGTTTCATCATCCGTTACCTTACCTACATCGTGCCCCTTGTGATCGTCCTATTA ATTCCGTTGTTGGTTGGCGCGCTGGCATATCCTGATGCCAGTGTCGGAGGTGTCCGGTTGGTCTGGTTTTCTGTC TGGTTGGAAATTGTCTGGTTGACATTGTGGGCTGGAAGAATTGTTTCCAAGTTAATACCTATACCTGTGAATGCG CTCGCCAGTATCTTTACCAACAATGCAAAGAAATGGCGTGATCTTGCCAAGCAATTGGAACTGCATGCGACCCTT TTCTTCTGGTGGTTGGGTGTCGAAATTTCTTTCCTCCCTACGATGAAGAATCATCACGTGGACGGAAACCATACG ACGCGCTCCTGGGAAAACACGCTCAACAAGATCATCATTTCCGTCTTCGTTTGGACGATCCTCAACCTGGTGGAG AAGTTCATTATTCAGCTGATCGCTATCAGCTTCCACACACGTACTTATGCCGATAGAATTGAGATCAACAAGTTC CAGATTGGCAGCTTGACCAAACTATACGAATTCTCGCGGAGGAAAATTACTGCCAAGGACAAGGAATTTGAGGAG CAAAAGCAGCCCGGCTCTAACAACGGCCTCAAGATCCCGTTCCACTACGCTGGTAAAGCGGGGCGTCTTGCTAAG GGTGCCTTCACCAAGGTTGGTGATGTTGCTGGTGCAGTTGCAGCGGACTTCACTGGTCGTACGGCTACCAACAGC AACCACCCTTACCAGGTTGTGCTGGCTTTGCTGCGAACCACGAGCGGTTGCCAGGTTTTGGCTCGGCGACTCTAC CGGACTCTCGTGCGGGATGGCTTTGAGACCGTTTTCTCTGGCGATCTGAAGGAGGCGTTTGATAACAATGACGAA GCCGAGGCTGCCTTTACCATGTTCGACAAGGACATGAACGGAGATATTTCAATGGAGGAATTGGAGTCTGTGTGC GTGGAAATCGGACGCGAACGCAAAGCCATCACTGCGTCTCTGAAAGACCTTGATTCTGTTGTCGGAAGACTTGAC AACGTACTGGAATTCTTCGTGATTGTCATTGCCCTGATCGTTTTCTTGACCCTGATTTCCACCTCGGCTGCCGGC GTACTCACGTCTGCAGGCTCCAGTATCCTTGCGCTGTCTTGGCTGTTCTCTGCCACTGCACAGGAGTTCCTTCAG TCGGTCATTTTCGTCTTCATCAAGCACCCGTTTGATGTTGGTGACCGCGTAACAGTTTATGGTAACTCAGGTGAT TCCGGCCTTGGTGATGACTACTTCGTCAAGCAGATTTCCCTCTTGTATACCGAGTTCAAGAAGATGCAGGGTCAC GTTGTTCAAGCCCCGAACAGCTATCTGAACGGTCTCTTCATTCTCAACCAGCGCAGATCAGGTGCCCTGGCCGAG GCTGTTCCTATTGTCATCAAGTATGGCACGACACTCGAGCAAATTGATGGTCTTCGCCAACGGTTGTTGGAATTT GTCCGCAGCGAACGCCGCGAATTCCAGACTAACATCCTCACTGAGATGCGTGAGGTGACTGAAAACTTCTCAGTC ACCCTCAATGTTGTCTTCTTCTACAAGTCCAACTGGCAAAATGAGGGCTTGCGTTTGCAACGTCGCAATAAGTTC ATCTGCATGCTGATGCTTGCCTTGCAAGAGATTGGCATCGAAGGCCCACGCATGAACCTCCAGGGTGCCCGTGTC GACATTCCCTTCCATGTCGCCGGGTTCCCTTCGCATAACATGGGCGCTCCTCCCGGCAGCAGTGATGGCCGGCCT CCTCCCACCCCTGTCCACCAGCACGATTCGCTCCCCGAAAATATGGGCACCAGCAGCTCTGTCCGCCAGCATTCT ATCCTTCGCAAGGGCGCGGACGCCGCCGCTGCCCGGGCCCGTGGTGACTCGATGCTCACGCGAAAGCATGTCGAC TTCTCTCTGGGCATGCGCGACGTTTCTTCCGGCGACGTTATGGGTGATGTGTTTGAAGACCGCCGCACTCGTGTG GATGACGTTGTCCGGATGGCCAACCGTGAAACCGCGGAGCGTCGCATCCAGGAAGAAGAGGAAGAGCAAGCCGAG CGGCAGAGCCGTGCATCTACCTCTCACCGCCGAAGCCACTCCAACACCAGCGCCGCCCCGTCTGCGGCGCGCTCC GGTCGCCAGTCAATGGAATCCCAGGGTGGTCACAGTTTGTCCTCTGTCAGTCGCGGCCGATTCTTCCGTCATCGC AACAGCATCAGCAGCCGCGACCCAGCTGATCTGGAGCAAGGGCAATCCCATGGCCAGCAGTCGCCTCAGATCCGC GCCGTGTCGCCCGCTATGGACGAGAAATGA |
Gene | >Ani_SJS72_1|g2429.t1 ATGTCGACCTCTATGGGAGAGCATCTTTCTCCTGATCATCCGGAAGAGAAGAGCAAGCACAGATACGACGATGGC ACTCCTGACTCTGACGAAGGAACCTACGTCTATGACAGTTCTAGTAATGGACACCACCTGAGGGTGGACACTTCT TACAATGACTTGGATAGGACCGCCCTGTGTTCTCCTGTCACTGCGAGAGAAGAATCTACGCGTCTAGAAGACGAC CTGGCAGTTATGGAGGCTGAACGGATGGTTTCGCGCTCCACCCAAGAGGCAGAGTCGAAAAAGAGTGTTAACGGC GGCCGTACATCCACCTCCCGCTCTCGTTCACGTTCTCGCTCGCGCCCGAACGAACATGTCGACGAGTTTGATGAG GCCACTAATCCGCTGCATGAGAAAGCTGCAGTCTACAACCCACCCGAGAATCCCAATACCAACATTGCCAGATTC GTCAAGAAACTCCACGAATCTAGTTTCATCATCCGTTACCTTACCTACATCGTGCCCCTTGTGATCGTCCTATTA ATTCCGTTGTTGGTTGGCGCGCTGGCATATCCTGATGCCAGTGTCGGAGGTGTCCGGTTGGTCTGGTTTTCTGTC TGGTTGGAAATTGTCTGGTTGACATTGTGGGCTGGAAGAGTGAGTACCCCTGATATCGTCACCCGTTTCCCATTG CCCTGTTGCTGATACGAGTCCTGGCAGATTGTTTCCAAGTTAATACCTATACCTGTGAATGCGCTCGCCAGTATC TTTACCAACAATGCAAAGAAATGGCGTGATCTTGCCAAGCAATTGGAACTGCATGCGACCCTTTTCTTCTGGTGG TTGGGTGTCGAAATTTCTTTCCTCCCTACGATGAAGAATCATCACGTGGACGGAAACCATACGACGCGCTCCTGG GAAAACACGCTCAACAAGATCATCATTTCCGTCTTCGTTTGGACGATCCTCAACCTGGTGGAGAAGTTCATTATT CAGCTGATCGCTATCAGCTTCCACACACGTACTTATGCCGATAGAATTGAGATCAACAAGTTCCAGATTGGCAGC TTGACCAAACTATACGAATTCTCGCGGAGGAAAATTACTGCCAAGGACAAGGAATTTGAGGAGCAAAAGCAGCCC GGCTCTAACAACGGCCTCAAGATCCCGTTCCACTACGCTGGTAAAGCGGGGCGTCTTGCTAAGGGTGCCTTCACC AAGGTTGGTGATGTTGCTGGTGCAGTTGCAGCGGACTTCACTGGTCGTACGGCTACCAACAGCAACCACCCTTAC CAGGTTGTGCTGGCTTTGCTGCGAACCACGAGCGGTTGCCAGGTTTTGGCTCGGCGACTCTACCGGACTCTCGTG CGGGATGGCTTTGAGACCGTTTTCTCTGGCGATCTGAAGGAGGCGTTTGATAACAATGACGAAGCCGAGGCTGCC TTTACCATGTTCGACAAGGACATGAACGGAGATATTTCAATGGAGGAATTGGAGTCTGTGTGCGTGGAAATCGGA CGCGAACGCAAAGCCATCACTGCGTCTCTGAAAGACCTTGATTCTGTTGTCGGAAGACTTGACAACGTACTGGAA TTCTTCGTGATTGTCATTGCCCTGATCGTTTTCTTGACCCTGATTTCCACCTCGGCTGCCGGCGTACTCACGTCT GCAGGCTCCAGTATCCTTGCGCTGTCTTGGCTGTTCTCTGCCACTGCACAGGAGTTCCTTCAGTCGGTCATTTTC GTCTTCATCAAGCACCCGTTTGATGTTGGTGACCGCGTAACAGTTTATGGTAACTCAGGTGATTCCGGCCTTGGT GATGACTACTTCGTCAAGCAGATTTCCCTCTTGTATACCGAGTTCAAGAAGATGCAGGGTCACGTTGTTCAAGCC CCGAACAGCTATCTGAACGGTCTCTTCATTCTCAACCAGCGCAGATCAGGTGCCCTGGCCGAGGCTGTTCCTATT GTCATCAAGTATGGCACGACACTCGAGCAAATTGATGGTCTTCGCCAACGGTTGTTGGAATTTGTCCGCAGCGAA CGCCGCGAATTCCAGACTAACATCCTCACTGAGATGCGTGAGGTGACTGAAAACTTCTCAGTCACCCTCAATGTT GTCTTCTTCTACAAGTCCAACTGGCAAAATGAGGGCTTGCGTTTGCAACGTCGCAATAAGTTCATCTGCATGCTG ATGCTTGCCTTGCAAGAGATTGGCATCGAAGGCCCACGCATGAACCTCCAGGGTGCCCGTGTCGACATTCCCTTC CATGTCGCCGGGTTCCCTTCGCATAACATGGGCGCTCCTCCCGGCAGCAGTGATGGCCGGCCTCCTCCCACCCCT GTCCACCAGCACGATTCGCTCCCCGAAAATATGGGCACCAGCAGCTCTGTCCGCCAGCATTCTATCCTTCGCAAG GGCGCGGACGCCGCCGCTGCCCGGGCCCGTGGTGACTCGATGCTCACGCGAAAGCATGTCGACTTCTCTCTGGGC ATGCGCGACGTTTCTTCCGGCGACGTTATGGGTGATGTGTTTGAAGACCGCCGCACTCGTGTGGATGACGTTGTC CGGATGGCCAACCGTGAAACCGCGGAGCGTCGCATCCAGGAAGAAGAGGAAGAGCAAGCCGAGCGGCAGAGCCGT GCATCTACCTCTCACCGCCGAAGCCACTCCAACACCAGCGCCGCCCCGTCTGCGGCGCGCTCCGGTCGCCAGTCA ATGGAATCCCAGGGTGGTCACAGTTTGTCCTCTGTCAGTCGCGGCCGATTCTTCCGTCATCGCAACAGCATCAGC AGCCGCGACCCAGCTGATCTGGAGCAAGGGCAATCCCATGGCCAGCAGTCGCCTCAGATCCGCGCCGTGTCGCCC GCTATGGACGAGAAATGA |