© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2426.t1 |
| Gene name | |
| Location | scaffold_012:214301..216476 |
| Strand | + |
| Gene length (bp) | 2175 |
| Transcript length (bp) | 1935 |
| Coding sequence length (bp) | 1935 |
| Protein length (aa) | 645 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 6.3E-44 | 69 | 384 |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 1.4E-36 | 497 | 636 |
| PF00890 | FAD_binding_2 | FAD binding domain | 5.4E-05 | 70 | 101 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 5.6E-06 | 73 | 101 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2426.t1 MSNDQDMPRMPQRPVLPPNACSHQTCLGRISSLTAWIVVLLAFATTALGASGDYLDDAEQGVPGLDASFDYVVVG AGAGGLTLAARLAQHRYKVALVEAGDFYEFKYPLAAVPGAGIIGIGSDVSSSTPVDWRFVAYAVPGANYRDLHYP RGKCLGGSTGSNMMVYQRPNKEAMQKWAELVNDDSYTFDRVLPFFQRTANFTPPNNDVRNSNATASFNQGAFDKR GEPLQVSYPEFAVPFSSWVKRGMESVGIPEIQDFNSGSLLGAQYCALTIDPHKKIRSSSEAAFKSSPIPRLMTLA VYKKTMAKRILFNIERRATGVEVRTGGSKYILRATREVIVSAGAFQSPQLLMVSGIGPANELKQHGIEIIVDLPG VGKNMWDHVFFGPAYRVALPTSTRIATDFLYLTEVIVQYLSNHSGPLSTQGIDFLAFEKVPIELRSHFSEETIRD LSWFPPGWPEIEYIPVALYLGDFSDPIKHQPLDGAQYASIAGALVAPTSRGNVTIISDDTDDLPIINPNWLATDT DQEVAIAIYRRNREIFHSAGMEPIIDGEEYFPGEELQTDSEILEVVKDTLMTVYHASCTCKMGVRNDSMAVVDSQ ARVFGVDGLRVVDASAFPILPPGHPQSVVYMLAEKIASDIISWD* |
| Coding | >Ani_SJS72_1|g2426.t1 ATGTCTAACGATCAGGATATGCCTCGGATGCCTCAAAGGCCCGTACTTCCGCCGAACGCCTGCTCTCATCAAACC TGCCTTGGTCGGATATCTTCTCTTACAGCCTGGATAGTTGTCCTATTGGCCTTTGCTACCACTGCTTTAGGAGCC TCGGGAGATTATCTCGACGACGCCGAGCAAGGTGTTCCGGGGCTAGATGCCTCCTTCGATTATGTGGTTGTCGGT GCCGGGGCCGGGGGTTTGACTCTGGCAGCTCGTCTCGCACAACACAGGTACAAAGTAGCTCTGGTTGAGGCGGGA GACTTCTACGAGTTCAAATATCCCCTAGCTGCGGTTCCAGGAGCCGGGATCATAGGAATAGGGAGCGATGTCAGC AGCTCGACACCCGTGGATTGGCGGTTTGTCGCCTACGCTGTTCCGGGAGCCAACTATCGCGACCTGCATTACCCC AGAGGCAAATGCCTGGGAGGATCGACAGGCTCCAACATGATGGTCTATCAAAGACCAAACAAGGAGGCAATGCAA AAATGGGCGGAGCTCGTTAACGACGATAGCTATACTTTCGACCGAGTTCTCCCTTTCTTCCAACGCACGGCTAAC TTCACTCCGCCCAACAACGACGTACGGAACAGCAACGCCACAGCATCTTTCAACCAGGGTGCGTTTGATAAACGG GGCGAGCCTCTGCAAGTATCGTACCCTGAGTTCGCCGTACCGTTTTCGAGCTGGGTGAAACGCGGTATGGAGTCT GTAGGCATTCCCGAGATCCAGGATTTCAACAGCGGGTCACTACTGGGCGCTCAGTATTGTGCTCTGACTATTGAC CCACACAAGAAGATCCGAAGTAGTTCAGAGGCCGCTTTCAAGAGCTCTCCAATACCACGCCTGATGACTCTTGCG GTGTACAAAAAGACAATGGCAAAGAGGATACTATTCAACATAGAGAGGCGAGCTACCGGAGTGGAGGTCAGAACG GGAGGTTCGAAATATATATTGCGAGCCACCCGGGAAGTCATCGTGTCAGCTGGGGCATTCCAGAGCCCTCAGCTC CTAATGGTATCTGGAATTGGCCCGGCCAATGAGCTGAAACAGCATGGTATTGAGATTATTGTTGACCTTCCAGGA GTAGGGAAAAACATGTGGGATCATGTTTTCTTCGGGCCTGCGTACCGAGTTGCGCTCCCAACAAGCACCAGGATC GCTACCGACTTTCTTTATTTGACTGAAGTGATCGTCCAGTATTTATCAAATCATAGTGGTCCACTGTCAACCCAG GGAATTGATTTCTTGGCTTTTGAGAAGGTCCCAATTGAACTGCGCTCCCACTTCTCCGAAGAGACGATCCGGGAT CTATCTTGGTTCCCTCCTGGCTGGCCTGAGATAGAGTACATCCCAGTGGCTCTCTATCTTGGGGACTTCTCTGAT CCTATTAAGCATCAACCGCTAGATGGGGCACAGTATGCATCAATCGCTGGAGCATTAGTCGCACCCACATCTCGC GGCAATGTCACCATCATCTCAGACGACACAGATGACCTGCCGATAATCAATCCTAACTGGCTTGCAACCGACACA GACCAGGAAGTGGCTATTGCTATTTATCGAAGAAATCGCGAGATTTTCCATAGCGCGGGGATGGAACCGATTATT GACGGGGAAGAGTACTTTCCCGGTGAAGAATTGCAGACTGATTCGGAAATACTAGAAGTGGTCAAGGACACACTT ATGACAGTCTACCATGCTTCATGCACGTGCAAGATGGGTGTTCGCAACGACTCGATGGCTGTGGTTGACAGCCAG GCACGAGTATTCGGAGTTGATGGATTGAGAGTGGTCGATGCCAGTGCGTTCCCAATTCTCCCTCCGGGACATCCT CAATCGGTAGTCTACATGCTTGCCGAGAAGATCGCGTCGGACATCATATCCTGGGACTGA |
| Transcript | >Ani_SJS72_1|g2426.t1 ATGTCTAACGATCAGGATATGCCTCGGATGCCTCAAAGGCCCGTACTTCCGCCGAACGCCTGCTCTCATCAAACC TGCCTTGGTCGGATATCTTCTCTTACAGCCTGGATAGTTGTCCTATTGGCCTTTGCTACCACTGCTTTAGGAGCC TCGGGAGATTATCTCGACGACGCCGAGCAAGGTGTTCCGGGGCTAGATGCCTCCTTCGATTATGTGGTTGTCGGT GCCGGGGCCGGGGGTTTGACTCTGGCAGCTCGTCTCGCACAACACAGGTACAAAGTAGCTCTGGTTGAGGCGGGA GACTTCTACGAGTTCAAATATCCCCTAGCTGCGGTTCCAGGAGCCGGGATCATAGGAATAGGGAGCGATGTCAGC AGCTCGACACCCGTGGATTGGCGGTTTGTCGCCTACGCTGTTCCGGGAGCCAACTATCGCGACCTGCATTACCCC AGAGGCAAATGCCTGGGAGGATCGACAGGCTCCAACATGATGGTCTATCAAAGACCAAACAAGGAGGCAATGCAA AAATGGGCGGAGCTCGTTAACGACGATAGCTATACTTTCGACCGAGTTCTCCCTTTCTTCCAACGCACGGCTAAC TTCACTCCGCCCAACAACGACGTACGGAACAGCAACGCCACAGCATCTTTCAACCAGGGTGCGTTTGATAAACGG GGCGAGCCTCTGCAAGTATCGTACCCTGAGTTCGCCGTACCGTTTTCGAGCTGGGTGAAACGCGGTATGGAGTCT GTAGGCATTCCCGAGATCCAGGATTTCAACAGCGGGTCACTACTGGGCGCTCAGTATTGTGCTCTGACTATTGAC CCACACAAGAAGATCCGAAGTAGTTCAGAGGCCGCTTTCAAGAGCTCTCCAATACCACGCCTGATGACTCTTGCG GTGTACAAAAAGACAATGGCAAAGAGGATACTATTCAACATAGAGAGGCGAGCTACCGGAGTGGAGGTCAGAACG GGAGGTTCGAAATATATATTGCGAGCCACCCGGGAAGTCATCGTGTCAGCTGGGGCATTCCAGAGCCCTCAGCTC CTAATGGTATCTGGAATTGGCCCGGCCAATGAGCTGAAACAGCATGGTATTGAGATTATTGTTGACCTTCCAGGA GTAGGGAAAAACATGTGGGATCATGTTTTCTTCGGGCCTGCGTACCGAGTTGCGCTCCCAACAAGCACCAGGATC GCTACCGACTTTCTTTATTTGACTGAAGTGATCGTCCAGTATTTATCAAATCATAGTGGTCCACTGTCAACCCAG GGAATTGATTTCTTGGCTTTTGAGAAGGTCCCAATTGAACTGCGCTCCCACTTCTCCGAAGAGACGATCCGGGAT CTATCTTGGTTCCCTCCTGGCTGGCCTGAGATAGAGTACATCCCAGTGGCTCTCTATCTTGGGGACTTCTCTGAT CCTATTAAGCATCAACCGCTAGATGGGGCACAGTATGCATCAATCGCTGGAGCATTAGTCGCACCCACATCTCGC GGCAATGTCACCATCATCTCAGACGACACAGATGACCTGCCGATAATCAATCCTAACTGGCTTGCAACCGACACA GACCAGGAAGTGGCTATTGCTATTTATCGAAGAAATCGCGAGATTTTCCATAGCGCGGGGATGGAACCGATTATT GACGGGGAAGAGTACTTTCCCGGTGAAGAATTGCAGACTGATTCGGAAATACTAGAAGTGGTCAAGGACACACTT ATGACAGTCTACCATGCTTCATGCACGTGCAAGATGGGTGTTCGCAACGACTCGATGGCTGTGGTTGACAGCCAG GCACGAGTATTCGGAGTTGATGGATTGAGAGTGGTCGATGCCAGTGCGTTCCCAATTCTCCCTCCGGGACATCCT CAATCGGTAGTCTACATGCTTGCCGAGAAGATCGCGTCGGACATCATATCCTGGGACTGA |
| Gene | >Ani_SJS72_1|g2426.t1 ATGTCTAACGATCAGGATATGCCTCGGATGCCTCAAAGGCCCGTACTTCCGCCGAACGCCTGCTCTCATCAAACC TGCCTTGGTCGGATATCTTCTCTTACAGCCTGGATAGTTGTCCTATTGGCCTTTGCTACCACTGCTTTAGGAGCC TCGGGAGATTATCTCGACGACGCCGAGCAAGGTGTTCCGGGGCTAGATGCCTCCTTCGATTATGTGGTTGTCGGT GCCGGGGCCGGGGGTTTGACTCTGGCAGCTCGTCTCGCACAACACAGGTACAAAGTAGCTCTGGTTGAGGCGGGA GACTTCTACGAGTTCAAATATCCCCTAGCTGCGGTTCCAGGAGCCGGGATCATAGGAATAGGGAGCGATGTCAGC AGCTCGACACCCGTGGATTGGCGGTTTGTCGCCTACGCTGTTCCGGGAGCCAACTATCGCGACCTGCATTACCCC AGAGGCAAATGCCTGGGAGGATCGTAGGCTCACTTCTCCTCTCACTTTCGTCGGTGCATTTCCAGATGGCCAGCG CTGATTCTTCCGACCTTCTACAGGACAGGCTCCAACATGATGGTCTATCAAAGGTTCGAAACCACTCGCCGGGTA GTTCACGGAGGGCAGGACTGATATGAACTGGAGCTAGACCAAACAAGGAGGCAATGCAAAAATGGGCGGAGCTCG TTAACGACGATAGCTATACTTTCGACCGAGTTCTCCCTTTCTTCCAACGCACGGCTAACTTCACTCCGCCCAACA ACGACGTACGGAACAGCAACGCCACAGCATCTTTCAACCAGGGTGCGTTTGATAAACGGGGCGAGCCTCTGCAAG TATCGTACCCTGAGTTCGCCGTACCGTTTTCGAGCTGGGTGAAACGCGGTATGGAGTCTGTAGGCATTCCCGAGA TCCAGGATTTCAACAGCGGGTCACTACTGGGCGCTCAGTATTGTGCTCTGACTATTGACCCACACAAGAAGATCC GAAGTAGTTCAGAGGCCGCTTTCAAGAGCTCTCCAATACCACGCCTGATGACTCTTGCGGTGTACAAAAAGACAA TGGCAAAGAGGATACTATTCAACATAGAGAGGCGAGCTACCGGAGTGGAGGTCAGAACGGGAGGTTCGAAATATA TATTGCGAGCCACCCGGGAAGTCATCGTGTCAGCTGGGGCATTCCAGAGCCCTCAGCTCCTAATGGTATCTGGAA TTGGCCCGGCCAATGAGCTGAAACAGCATGGTATTGAGATTATTGTTGACCTTCCAGGAGTAGGGAAAAACATGT GGGATCATGTTTTCTTCGGGCCTGCGTACCGAGTTGCGCTCCCAACAAGCACCAGGATCGCTACCGACTTTCTTT ATTTGACTGAAGTGATCGTCCAGTATTTATCAAATCATAGTGGTCCACTGTCAACCCAGGGAATTGATTTCTTGG CTTTTGAGAAGGTCCCAATTGAACTGCGCTCCCACTTCTCCGAAGAGACGATCCGGGATCTATCTTGGTTCCCTC CTGGCTGGCCTGAGATAGAGGTACGCTCTCTGCACGGGAACTTTGAGCATGGCTAACGGTCAACCCCTTGAAGTA CATCCCAGTGGCTCTCTATCTTGGGGACTTCTCTGATCCTATTAAGCATCAACCGCTAGATGGGGCACAGTATGC ATCAATCGCTGGAGCATTAGTCGCACCCACATCTCGCGGCAATGTCACCATCATCTCAGACGACACAGATGACCT GCCGATAATCAATCCTAACTGGCTTGCAACCGACACAGACCAGGAAGTGGCTATTGCTATTTATCGAAGAAATCG CGAGATTTTCCATAGCGCGGGGATGGAACCGATTATTGACGGGGAAGAGTACTTTCCCGGTGAAGAATTGCAGAC TGATTCGGAAATACTAGAAGTGGTCAAGGACACACTTATGACAGTCTACCATGCTTCATGCACGTGCAAGATGGG TGTTCGCAACGACTCGATGGCTGTGGTTGACAGCCAGGCACGAGTATTCGGAGTTGATGGATTGAGAGTGGTCGA TGCCAGTGCGTTCCCAATTCTCCCTCCGGGACATCCTCAATCGGTAGTCTGTAAGCAGCCTATAGTTCCAGATTT TCCTCTGATTCGCTGCTGACAGTCTTAGACATGCTTGCCGAGAAGATCGCGTCGGACATCATATCCTGGGACTGA |