© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2375.t1 |
| Gene name | |
| Location | scaffold_012:66610..67837 |
| Strand | + |
| Gene length (bp) | 1227 |
| Transcript length (bp) | 1227 |
| Coding sequence length (bp) | 1227 |
| Protein length (aa) | 409 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 5.6E-15 | 64 | 212 |
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 6.4E-22 | 275 | 391 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 83 | 22 |
| 2 | 88 | 107 | 19 |
| 3 | 141 | 163 | 22 |
| 4 | 192 | 214 | 22 |
| 5 | 235 | 257 | 22 |
| 6 | 272 | 294 | 22 |
| 7 | 301 | 323 | 22 |
| 8 | 338 | 360 | 22 |
| 9 | 372 | 394 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2375.t1 MSLPTSTSPNGPAPQDPGASGAANMEEKPSPPLESAPQQPDRAAEPTLHPASHKLTQFYTISYLIFFAIFGTLAR LGLQALTFYPGAPVVTGVLWANVGGSLLMGFFQEDRNLFREEWGTPNNNNVDPSERAKQHKTIKKTIPLYIGLTT GFCGCFTSFSSFIRDVFLALTNDLSNPSQENNIVSRNGGYSFMALVAVILMTVSLSLCALLFGTHLAAALDSITP TVPFRFTRRVLDPLMAVLGWGCWLGAVFLAIWPPDRNDGGMEVWRGRAVFAIVFAPLGCFLRFYVSLLLNARVPS FPLGTFAVNIFGTVVLAMCYDLQHVRSIGGGVLTGCQVLQGVMDGFCGSATTISTWVAELSALGAAGGRKRWAAY VYGTVSVGVALGFVVVIVGSLGWTRGFDGPVCG* |
| Coding | >Ani_SJS72_1|g2375.t1 ATGTCACTGCCCACTTCCACCTCCCCCAATGGCCCCGCTCCCCAAGACCCAGGCGCATCAGGCGCCGCCAATATG GAGGAGAAACCATCACCACCACTCGAATCCGCACCACAACAACCAGACCGCGCCGCAGAACCCACCCTCCACCCC GCCTCCCACAAACTCACCCAATTCTACACCATCTCCTACCTAATCTTCTTCGCCATCTTCGGCACTCTCGCCCGG CTGGGCCTCCAAGCCCTAACCTTCTACCCCGGCGCCCCCGTAGTCACCGGCGTCCTATGGGCCAACGTCGGCGGC TCCCTCCTAATGGGCTTTTTCCAAGAAGACCGCAACCTGTTTCGCGAAGAATGGGGCACCCCCAATAATAACAAT GTTGACCCCTCTGAGCGCGCAAAACAACATAAAACCATCAAGAAGACCATCCCACTGTATATCGGCCTCACGACA GGTTTCTGCGGCTGCTTTACGTCTTTCTCGTCGTTCATTCGGGATGTTTTCCTGGCGCTTACGAATGATTTGTCG AATCCGTCACAAGAGAATAATATTGTTTCGAGGAATGGGGGGTATAGCTTCATGGCCCTGGTCGCTGTTATTCTT ATGACGGTTTCGCTGAGTTTATGTGCTTTGTTGTTTGGAACGCATCTGGCTGCTGCGTTGGATAGTATCACTCCT ACTGTTCCGTTTCGGTTCACGAGACGAGTTCTAGATCCGCTCATGGCGGTGCTGGGATGGGGGTGTTGGCTTGGG GCGGTGTTTCTTGCGATTTGGCCGCCGGATCGCAATGATGGTGGGATGGAGGTGTGGCGTGGTCGTGCGGTGTTT GCGATTGTGTTTGCGCCGTTGGGGTGTTTTCTTCGGTTCTATGTCAGCTTGTTGCTGAATGCGAGGGTGCCGAGT TTCCCGCTGGGGACTTTTGCGGTGAATATCTTCGGGACGGTCGTGTTGGCTATGTGTTACGATTTGCAGCATGTG AGGAGCATTGGAGGGGGTGTGTTGACGGGGTGTCAGGTCTTGCAGGGGGTTATGGATGGGTTTTGTGGGTCGGCG ACAACGATTAGTACTTGGGTGGCGGAGTTGAGTGCGCTTGGGGCTGCTGGGGGGAGGAAGAGATGGGCGGCGTAT GTTTATGGGACTGTGAGTGTGGGTGTTGCGTTGGGGTTTGTGGTGGTTATTGTTGGTTCGTTGGGATGGACGAGG GGGTTTGATGGGCCGGTTTGTGGGTGA |
| Transcript | >Ani_SJS72_1|g2375.t1 ATGTCACTGCCCACTTCCACCTCCCCCAATGGCCCCGCTCCCCAAGACCCAGGCGCATCAGGCGCCGCCAATATG GAGGAGAAACCATCACCACCACTCGAATCCGCACCACAACAACCAGACCGCGCCGCAGAACCCACCCTCCACCCC GCCTCCCACAAACTCACCCAATTCTACACCATCTCCTACCTAATCTTCTTCGCCATCTTCGGCACTCTCGCCCGG CTGGGCCTCCAAGCCCTAACCTTCTACCCCGGCGCCCCCGTAGTCACCGGCGTCCTATGGGCCAACGTCGGCGGC TCCCTCCTAATGGGCTTTTTCCAAGAAGACCGCAACCTGTTTCGCGAAGAATGGGGCACCCCCAATAATAACAAT GTTGACCCCTCTGAGCGCGCAAAACAACATAAAACCATCAAGAAGACCATCCCACTGTATATCGGCCTCACGACA GGTTTCTGCGGCTGCTTTACGTCTTTCTCGTCGTTCATTCGGGATGTTTTCCTGGCGCTTACGAATGATTTGTCG AATCCGTCACAAGAGAATAATATTGTTTCGAGGAATGGGGGGTATAGCTTCATGGCCCTGGTCGCTGTTATTCTT ATGACGGTTTCGCTGAGTTTATGTGCTTTGTTGTTTGGAACGCATCTGGCTGCTGCGTTGGATAGTATCACTCCT ACTGTTCCGTTTCGGTTCACGAGACGAGTTCTAGATCCGCTCATGGCGGTGCTGGGATGGGGGTGTTGGCTTGGG GCGGTGTTTCTTGCGATTTGGCCGCCGGATCGCAATGATGGTGGGATGGAGGTGTGGCGTGGTCGTGCGGTGTTT GCGATTGTGTTTGCGCCGTTGGGGTGTTTTCTTCGGTTCTATGTCAGCTTGTTGCTGAATGCGAGGGTGCCGAGT TTCCCGCTGGGGACTTTTGCGGTGAATATCTTCGGGACGGTCGTGTTGGCTATGTGTTACGATTTGCAGCATGTG AGGAGCATTGGAGGGGGTGTGTTGACGGGGTGTCAGGTCTTGCAGGGGGTTATGGATGGGTTTTGTGGGTCGGCG ACAACGATTAGTACTTGGGTGGCGGAGTTGAGTGCGCTTGGGGCTGCTGGGGGGAGGAAGAGATGGGCGGCGTAT GTTTATGGGACTGTGAGTGTGGGTGTTGCGTTGGGGTTTGTGGTGGTTATTGTTGGTTCGTTGGGATGGACGAGG GGGTTTGATGGGCCGGTTTGTGGGTGA |
| Gene | >Ani_SJS72_1|g2375.t1 ATGTCACTGCCCACTTCCACCTCCCCCAATGGCCCCGCTCCCCAAGACCCAGGCGCATCAGGCGCCGCCAATATG GAGGAGAAACCATCACCACCACTCGAATCCGCACCACAACAACCAGACCGCGCCGCAGAACCCACCCTCCACCCC GCCTCCCACAAACTCACCCAATTCTACACCATCTCCTACCTAATCTTCTTCGCCATCTTCGGCACTCTCGCCCGG CTGGGCCTCCAAGCCCTAACCTTCTACCCCGGCGCCCCCGTAGTCACCGGCGTCCTATGGGCCAACGTCGGCGGC TCCCTCCTAATGGGCTTTTTCCAAGAAGACCGCAACCTGTTTCGCGAAGAATGGGGCACCCCCAATAATAACAAT GTTGACCCCTCTGAGCGCGCAAAACAACATAAAACCATCAAGAAGACCATCCCACTGTATATCGGCCTCACGACA GGTTTCTGCGGCTGCTTTACGTCTTTCTCGTCGTTCATTCGGGATGTTTTCCTGGCGCTTACGAATGATTTGTCG AATCCGTCACAAGAGAATAATATTGTTTCGAGGAATGGGGGGTATAGCTTCATGGCCCTGGTCGCTGTTATTCTT ATGACGGTTTCGCTGAGTTTATGTGCTTTGTTGTTTGGAACGCATCTGGCTGCTGCGTTGGATAGTATCACTCCT ACTGTTCCGTTTCGGTTCACGAGACGAGTTCTAGATCCGCTCATGGCGGTGCTGGGATGGGGGTGTTGGCTTGGG GCGGTGTTTCTTGCGATTTGGCCGCCGGATCGCAATGATGGTGGGATGGAGGTGTGGCGTGGTCGTGCGGTGTTT GCGATTGTGTTTGCGCCGTTGGGGTGTTTTCTTCGGTTCTATGTCAGCTTGTTGCTGAATGCGAGGGTGCCGAGT TTCCCGCTGGGGACTTTTGCGGTGAATATCTTCGGGACGGTCGTGTTGGCTATGTGTTACGATTTGCAGCATGTG AGGAGCATTGGAGGGGGTGTGTTGACGGGGTGTCAGGTCTTGCAGGGGGTTATGGATGGGTTTTGTGGGTCGGCG ACAACGATTAGTACTTGGGTGGCGGAGTTGAGTGCGCTTGGGGCTGCTGGGGGGAGGAAGAGATGGGCGGCGTAT GTTTATGGGACTGTGAGTGTGGGTGTTGCGTTGGGGTTTGTGGTGGTTATTGTTGGTTCGTTGGGATGGACGAGG GGGTTTGATGGGCCGGTTTGTGGGTGA |