© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2346.t1 |
| Gene name | |
| Location | scaffold_011:455311..457235 |
| Strand | + |
| Gene length (bp) | 1924 |
| Transcript length (bp) | 1734 |
| Coding sequence length (bp) | 1734 |
| Protein length (aa) | 578 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03547 | Mem_trans | Membrane transport protein | 2.8E-56 | 51 | 562 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 82 | 101 | 19 |
| 3 | 111 | 133 | 22 |
| 4 | 477 | 499 | 22 |
| 5 | 512 | 531 | 19 |
| 6 | 552 | 574 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2346.t1 MAIFTAPRSLQNAYPSISSQFMTQMGANPALLQDGNPHSSHPSFLNLVLLVFEAVLEVICVSLPGYFAAKQGMFD ADAQKLVANLNVTLFTPCLIFTKLGSQLTAEKLTDLAIIPAIFVIQTLVSYSCAFVVSRCLRLKKRPSNFVAAMA VFGNSNSLPISLVMSLSQTLKGLHWSRVPNDNDDEVAARGILYLLIFQQLGQLVRWSWGYHVLLAPRERYLEEAE ADPDTTRIGQGQERYTDNPEQIDPDEPLVRTRSFDEQTQASGASQEDSDAFASGQETPVTARDYPYSKVSSRSGG EEDSDRPALLDASAAPFMPRQSSAGDMLSFPAVHESYEKKGLVARIKASLRRLRGRIASGWEKGTGAVFRRLPTR MQKVLSVCSSWIRRFFHGLWEFMNPPLWAMLVSIVVASVPSLQNLFFDEGTFVSNSVTRAINQNGQVAVPLILVV LGANLERNTLPKEALEDMEHPKEEKKLIVASLVARMLLPTIIMAPILALLAKYVPVSILDDPIFIIVCFLLTGAP SALQLAQICQINNVYVSAMSKLLFQSYVVWILPSTLILVMCALEVVEWASAS* |
| Coding | >Ani_SJS72_1|g2346.t1 ATGGCCATTTTTACTGCCCCTAGATCTCTTCAAAATGCCTACCCGTCAATTTCGTCTCAGTTCATGACCCAGATG GGCGCCAATCCTGCCCTCCTTCAAGATGGCAACCCCCACTCGAGCCACCCCTCCTTCCTGAACCTCGTCCTCTTG GTCTTCGAAGCCGTCCTCGAGGTCATCTGCGTGAGTCTGCCGGGTTATTTTGCTGCCAAACAAGGCATGTTCGAT GCGGATGCCCAGAAGCTGGTAGCGAATCTCAACGTCACTTTATTTACTCCCTGCCTGATCTTCACAAAGCTCGGG TCCCAGCTCACAGCAGAAAAACTCACCGATCTGGCTATCATTCCGGCCATCTTCGTTATCCAAACTCTGGTCTCT TATTCCTGCGCCTTTGTTGTTTCGCGATGTCTCCGGCTCAAGAAACGACCTTCCAACTTTGTCGCCGCCATGGCG GTTTTCGGAAATTCTAATTCGCTCCCCATCTCCCTCGTCATGTCTCTGTCACAAACTCTCAAGGGTCTTCACTGG AGTCGCGTCCCGAACGATAACGATGATGAAGTAGCAGCGCGTGGTATTTTATATCTGCTCATCTTCCAGCAGCTT GGCCAGCTTGTGCGGTGGAGCTGGGGCTACCACGTGCTTCTTGCCCCCCGTGAGCGTTACTTGGAAGAGGCGGAA GCGGATCCGGATACCACTCGCATTGGACAGGGCCAGGAGCGATACACGGACAACCCGGAGCAAATTGATCCAGAT GAGCCGTTGGTGAGAACCAGAAGCTTCGATGAACAGACGCAAGCATCTGGAGCATCGCAGGAGGACTCGGATGCG TTCGCTTCAGGTCAAGAAACACCCGTGACCGCACGGGACTATCCCTACTCCAAGGTGTCGTCCCGTAGCGGTGGC GAGGAAGATTCCGACCGTCCGGCCCTGCTTGATGCTTCCGCTGCGCCGTTCATGCCCCGACAAAGCTCCGCCGGC GATATGCTATCATTCCCCGCTGTACACGAGAGCTACGAGAAGAAGGGCTTGGTTGCCCGCATCAAGGCGTCCCTT CGTCGGCTCCGTGGTCGCATCGCCAGCGGATGGGAGAAGGGGACTGGAGCCGTGTTCCGCCGGTTGCCAACGAGG ATGCAGAAGGTGCTCTCCGTCTGCTCCAGCTGGATCAGGAGGTTCTTCCATGGGTTATGGGAGTTCATGAACCCG CCCTTGTGGGCCATGCTTGTCTCGATCGTGGTTGCCTCGGTACCATCGCTGCAAAACTTGTTCTTCGATGAGGGC ACCTTTGTGAGCAATTCAGTGACTCGAGCGATCAACCAGAATGGCCAGGTTGCTGTGCCGTTGATCCTCGTCGTT CTGGGGGCCAATCTTGAACGCAACACGCTTCCTAAAGAGGCGCTGGAAGATATGGAGCATCCCAAGGAAGAGAAG AAGTTGATCGTCGCTTCTCTGGTGGCCCGCATGCTTCTCCCTACCATCATCATGGCTCCTATCCTTGCGTTGCTG GCCAAGTATGTGCCGGTCAGCATTTTGGACGATCCGATCTTTATTATCGTCTGCTTCCTCCTGACTGGAGCTCCG TCAGCACTTCAGCTGGCCCAGATTTGCCAGATCAACAATGTCTACGTCAGCGCCATGTCGAAGCTCTTGTTCCAG AGCTATGTGGTGTGGATCCTCCCGTCCACTCTTATCCTCGTCATGTGTGCTCTGGAGGTTGTTGAATGGGCGTCT GCCTCCTAA |
| Transcript | >Ani_SJS72_1|g2346.t1 ATGGCCATTTTTACTGCCCCTAGATCTCTTCAAAATGCCTACCCGTCAATTTCGTCTCAGTTCATGACCCAGATG GGCGCCAATCCTGCCCTCCTTCAAGATGGCAACCCCCACTCGAGCCACCCCTCCTTCCTGAACCTCGTCCTCTTG GTCTTCGAAGCCGTCCTCGAGGTCATCTGCGTGAGTCTGCCGGGTTATTTTGCTGCCAAACAAGGCATGTTCGAT GCGGATGCCCAGAAGCTGGTAGCGAATCTCAACGTCACTTTATTTACTCCCTGCCTGATCTTCACAAAGCTCGGG TCCCAGCTCACAGCAGAAAAACTCACCGATCTGGCTATCATTCCGGCCATCTTCGTTATCCAAACTCTGGTCTCT TATTCCTGCGCCTTTGTTGTTTCGCGATGTCTCCGGCTCAAGAAACGACCTTCCAACTTTGTCGCCGCCATGGCG GTTTTCGGAAATTCTAATTCGCTCCCCATCTCCCTCGTCATGTCTCTGTCACAAACTCTCAAGGGTCTTCACTGG AGTCGCGTCCCGAACGATAACGATGATGAAGTAGCAGCGCGTGGTATTTTATATCTGCTCATCTTCCAGCAGCTT GGCCAGCTTGTGCGGTGGAGCTGGGGCTACCACGTGCTTCTTGCCCCCCGTGAGCGTTACTTGGAAGAGGCGGAA GCGGATCCGGATACCACTCGCATTGGACAGGGCCAGGAGCGATACACGGACAACCCGGAGCAAATTGATCCAGAT GAGCCGTTGGTGAGAACCAGAAGCTTCGATGAACAGACGCAAGCATCTGGAGCATCGCAGGAGGACTCGGATGCG TTCGCTTCAGGTCAAGAAACACCCGTGACCGCACGGGACTATCCCTACTCCAAGGTGTCGTCCCGTAGCGGTGGC GAGGAAGATTCCGACCGTCCGGCCCTGCTTGATGCTTCCGCTGCGCCGTTCATGCCCCGACAAAGCTCCGCCGGC GATATGCTATCATTCCCCGCTGTACACGAGAGCTACGAGAAGAAGGGCTTGGTTGCCCGCATCAAGGCGTCCCTT CGTCGGCTCCGTGGTCGCATCGCCAGCGGATGGGAGAAGGGGACTGGAGCCGTGTTCCGCCGGTTGCCAACGAGG ATGCAGAAGGTGCTCTCCGTCTGCTCCAGCTGGATCAGGAGGTTCTTCCATGGGTTATGGGAGTTCATGAACCCG CCCTTGTGGGCCATGCTTGTCTCGATCGTGGTTGCCTCGGTACCATCGCTGCAAAACTTGTTCTTCGATGAGGGC ACCTTTGTGAGCAATTCAGTGACTCGAGCGATCAACCAGAATGGCCAGGTTGCTGTGCCGTTGATCCTCGTCGTT CTGGGGGCCAATCTTGAACGCAACACGCTTCCTAAAGAGGCGCTGGAAGATATGGAGCATCCCAAGGAAGAGAAG AAGTTGATCGTCGCTTCTCTGGTGGCCCGCATGCTTCTCCCTACCATCATCATGGCTCCTATCCTTGCGTTGCTG GCCAAGTATGTGCCGGTCAGCATTTTGGACGATCCGATCTTTATTATCGTCTGCTTCCTCCTGACTGGAGCTCCG TCAGCACTTCAGCTGGCCCAGATTTGCCAGATCAACAATGTCTACGTCAGCGCCATGTCGAAGCTCTTGTTCCAG AGCTATGTGGTGTGGATCCTCCCGTCCACTCTTATCCTCGTCATGTGTGCTCTGGAGGTTGTTGAATGGGCGTCT GCCTCCTAA |
| Gene | >Ani_SJS72_1|g2346.t1 ATGGCCATTTTTACTGCCCCTAGATCTCTTCAAAATGCCTACCCGTCAATTTCGTCTCAGTTCATGACCCAGATG GGCGCCAATCCTGCCCTCCTTCAAGATGGCAACCCCCACTCGAGCCACCCCTCCTTCCTGAACCTCGTCCTCTTG GTCTTCGAAGCCGTCCTCGAGGTCATCTGCGTGAGTCTGCCGGGTTATTTTGCTGCCAAACAAGGCATGTTCGAT GCGGATGCCCAGAAGCTGGTAGCGAATCTCAACGTCACTTTATTTACTCCCTGCCTGAGTAAGTTCCCTGCTTTC TTTGGCCGTACTTTTGGCATCTCAACTGACCACAACTGTTAGTCTTCACAAAGCTCGGGTCCCAGCTCACAGCAG AAAAACTCACCGATCTGGCTATCATTCCGGCCATCTTCGTTATCCAAACTCTGGTCTCTTATTCCTGCGCCTTTG TTGTTTCGCGATGTCTCCGGCTCAAGAAACGACCTTCCAACTTTGTCGCCGCCATGGCGGTAAGTGCAGTGTCCA ATACTTTCCACATTTTTTCCTTCCCTGTCTGTTCACTGACACGTGAAACAATGCTCCTAGGTTTTCGGAAATTCT AATTCGCTCCCCATCTCCCTCGTCATGTCTCTGTCACAAACTCTCAAGGGTCTTCACTGGAGTCGCGTCCCGAAC GATAACGATGATGAAGTAGCAGCGCGTGGTATTTTATATCTGCTCATCTTCCAGCAGCTTGGCCAGCTTGTGCGG TGGAGCTGGGGCTACCACGTGCTTCTTGCCCCCCGTGAGCGTTACTTGGAAGAGGCGGAAGCGGATCCGGATACC ACTCGCATTGGACAGGGCCAGGAGCGATACACGGACAACCCGGAGCAAATTGATCCAGATGAGCCGTTGGTGAGA ACCAGAAGCTTCGATGAACAGACGCAAGCATCTGGAGCATCGCAGGAGGACTCGGATGCGTTCGCTTCAGGTCAA GAAACACCCGTGACCGCACGGGACTATCCCTACTCCAAGGTGTCGTCCCGTAGCGGTGGCGAGGAAGATTCCGAC CGTCCGGCCCTGCTTGATGCTTCCGCTGCGCCGTTCATGCCCCGACAAAGCTCCGCCGGCGATATGCTATCATTC CCCGCTGTACACGAGAGCTACGAGAAGAAGGGCTTGGTTGCCCGCATCAAGGCGTCCCTTCGTCGGCTCCGTGGT CGCATCGCCAGCGGATGGGAGAAGGGGACTGGAGCCGTGTTCCGCCGGTTGCCAACGAGGATGCAGAAGGTGCTC TCCGTCTGCTCCAGCTGGATCAGGAGGTTCTTCCATGGGTTATGGGAGTTCATGAACCCGCCCTTGTGGGCCATG CTTGTCTCGATCGTGGTTGCCTCGGTACCATCGCTGCAAAACTTGTTCTTCGATGAGGGCACCTTTGTGAGCAAT TCAGTGACTCGAGCGATCAACCAGAATGGCCAGGTTGCTGTGCCGTTGATCCTCGTCGTTCTGGGGGCCAATCTT GAACGCAACACGCTTCCTAAAGAGGCGCTGGAAGATATGGAGCATCCCAAGGAAGAGAAGAAGTTGATCGTCGCT TCTCTGGTGGCCCGCATGCTTCTCCCTACCATCATCATGGCTCCTATCCTTGCGTTGCTGGCCAAGTATGTGCCG GTCAGCATTTTGGACGATCCGATCTTTATTATCGTCTGCTTCCTCCTGACTGGAGCTCCGTCAGCACTTCAGCTG GCCCAGATTTGCCAGATCAACAATGTCTACGTCAGCGCCATGTCGAAGCTCTTGTTCCAGAGCTATGTGGTGTGG TAAGTAAACCCAAGCTCGTTGCATCCTTGAATCAACCACTAATAGTGCCTCTAGGATCCTCCCGTCCACTCTTAT CCTCGTCATGTGTGCTCTGGAGGTTGTTGAATGGGCGTCTGCCTCCTAA |