© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2324.t1 |
| Gene name | |
| Location | scaffold_011:389944..393902 |
| Strand | + |
| Gene length (bp) | 3958 |
| Transcript length (bp) | 2313 |
| Coding sequence length (bp) | 2313 |
| Protein length (aa) | 771 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02386 | TrkH | Cation transport protein | 7.8E-97 | 335 | 742 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0006811 | ion transport | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 127 | 146 | 19 |
| 2 | 156 | 178 | 22 |
| 3 | 360 | 382 | 22 |
| 4 | 435 | 457 | 22 |
| 5 | 498 | 520 | 22 |
| 6 | 535 | 554 | 19 |
| 7 | 561 | 580 | 19 |
| 8 | 649 | 667 | 18 |
| 9 | 674 | 696 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2324.t1 MPSPMSDQSTIILANRSGYIHHKPPEVPRIYRIQSTVFPTQEWVESSVKVNCVVYLAKIMNKETAEVLRNFCKTL VASGVRPPHSRLIFLTKLARVAACQHDFSRLAAASESKHNCHASAIQLPHASLYSLFLCISAMTGAGLNTVDLSS LNSFQQSILFALLLLGHAILISITVLFVRMGAFQAKFKGISLERARKALQQQLVGQDTILEPIQESVASEEHYQL AKIDGATLDVKHAVTAGAAPADKCNDVRDDDQIRWVDDDQVTLSHMRARQKHHHHHRVFPMVGVGARLDLNNHPR DAAPRMTQNDGDTDLPALKGLIKGTQKYFRSKGSIARNSQFHGLTPEERERLGGVEYKAVSLLLVIVALYWILFL ICGIIGMGTWIAVNHPDIPRSNGLSPFWTGAFFAVSAFVNSGMSLLDANMTAFQTNAYPLLTMAFLILSGNTLYP CFLRFIIWAMRCLIPDKPSWATWKVTLDFILDHPRRVYTNLFPRRHTWYLLGTIIILNAIDWAGFEVLSIGNKEI ESLPTGYRVLDGLFQACAVRAGGFYVVTIADLRQGLLVLYVLMMYVSAYPVLVTMRNTNVYEERSLGIYAHDNTD DETEEKASPNMLIQLVRHHLLGRQDASTPEASRSYFVHQQLRSQLSHDLWWIALAVFLIAIAESGNYSRMPVAYS TLNIIFEVVSAYGCVGISVGFPSSNASFCSSWHTISKLILAAVMLRGRHRGLPVAIDRAVMLPNESLEWAEEEDA AMRREQSRAWGSDKMPVGSV* |
| Coding | >Ani_SJS72_1|g2324.t1 ATGCCCTCACCTATGAGTGACCAGTCCACAATCATACTCGCTAACAGATCGGGTTATATCCATCACAAGCCACCA GAAGTGCCTCGCATCTACAGAATCCAAAGTACTGTGTTTCCTACACAGGAATGGGTTGAATCGAGCGTGAAAGTC AATTGCGTGGTTTACCTGGCAAAGATAATGAATAAGGAAACTGCAGAAGTACTGAGAAATTTTTGCAAAACCCTT GTGGCTAGCGGTGTGCGCCCCCCCCACAGCCGCCTGATCTTCTTGACAAAACTTGCGCGCGTCGCAGCCTGCCAG CATGACTTCTCGAGGCTGGCGGCAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCAC GCTTCATTATACTCCCTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTCGACCTGTCTTCC CTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTTACTGTTGGGGCATGCTATTCTCATCTCAATAACGGTG CTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAAAGGCATATCACTTGAACGTGCCCGTAAAGCACTACAG CAACAACTGGTAGGACAAGACACCATACTTGAACCAATCCAAGAGAGTGTTGCCAGCGAGGAACACTATCAGCTG GCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGCGGTGACAGCAGGAGCTGCACCCGCAGATAAGTGCAAC GACGTGCGAGATGACGACCAGATCCGATGGGTCGACGATGATCAAGTCACCCTCAGCCATATGAGGGCACGTCAA AAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGGCGTTGGGGCCCGTCTTGACTTGAACAACCACCCCCGA GATGCTGCGCCAAGAATGACCCAGAATGATGGAGATACAGATTTACCTGCCCTCAAAGGCCTTATCAAGGGCACA CAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAATTCCCAGTTCCATGGGCTTACCCCTGAAGAGCGAGAG AGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACTACTGGTCATTGTTGCCCTCTACTGGATCCTGTTCCTC ATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGTGAATCATCCAGATATACCTCGATCAAACGGCCTATCG CCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATTTGTGAACAGCGGCATGTCGCTCTTGGATGCGAATATG ACTGCATTCCAGACAAATGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGGAACACGCTTTACCCA TGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGGGCGACATGGAAGGTT ACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTTTACACAAACCTCTTCCCGAGAAGACATACATGGTACTTG CTCGGTACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAGGAGATT GAAAGCTTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGCTGTACGAGCGGGAGGCTTCTAC GTCGTTACGATTGCGGACCTCCGTCAGGGACTACTCGTTCTATATGTTCTCATGATGTATGTATCAGCATACCCA GTGCTGGTTACCATGAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAACACGGAC GACGAGACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGACAAGAT GCATCCACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGACCTTTGG TGGATCGCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCATATTCG ACCCTGAATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGCTCGAAT GCCTCGTTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGCCACAGG GGTCTTCCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAAGATGCT GCTATGAGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |
| Transcript | >Ani_SJS72_1|g2324.t1 ATGCCCTCACCTATGAGTGACCAGTCCACAATCATACTCGCTAACAGATCGGGTTATATCCATCACAAGCCACCA GAAGTGCCTCGCATCTACAGAATCCAAAGTACTGTGTTTCCTACACAGGAATGGGTTGAATCGAGCGTGAAAGTC AATTGCGTGGTTTACCTGGCAAAGATAATGAATAAGGAAACTGCAGAAGTACTGAGAAATTTTTGCAAAACCCTT GTGGCTAGCGGTGTGCGCCCCCCCCACAGCCGCCTGATCTTCTTGACAAAACTTGCGCGCGTCGCAGCCTGCCAG CATGACTTCTCGAGGCTGGCGGCAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCAC GCTTCATTATACTCCCTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTCGACCTGTCTTCC CTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTTACTGTTGGGGCATGCTATTCTCATCTCAATAACGGTG CTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAAAGGCATATCACTTGAACGTGCCCGTAAAGCACTACAG CAACAACTGGTAGGACAAGACACCATACTTGAACCAATCCAAGAGAGTGTTGCCAGCGAGGAACACTATCAGCTG GCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGCGGTGACAGCAGGAGCTGCACCCGCAGATAAGTGCAAC GACGTGCGAGATGACGACCAGATCCGATGGGTCGACGATGATCAAGTCACCCTCAGCCATATGAGGGCACGTCAA AAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGGCGTTGGGGCCCGTCTTGACTTGAACAACCACCCCCGA GATGCTGCGCCAAGAATGACCCAGAATGATGGAGATACAGATTTACCTGCCCTCAAAGGCCTTATCAAGGGCACA CAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAATTCCCAGTTCCATGGGCTTACCCCTGAAGAGCGAGAG AGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACTACTGGTCATTGTTGCCCTCTACTGGATCCTGTTCCTC ATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGTGAATCATCCAGATATACCTCGATCAAACGGCCTATCG CCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATTTGTGAACAGCGGCATGTCGCTCTTGGATGCGAATATG ACTGCATTCCAGACAAATGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGGAACACGCTTTACCCA TGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGGGCGACATGGAAGGTT ACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTTTACACAAACCTCTTCCCGAGAAGACATACATGGTACTTG CTCGGTACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAGGAGATT GAAAGCTTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGCTGTACGAGCGGGAGGCTTCTAC GTCGTTACGATTGCGGACCTCCGTCAGGGACTACTCGTTCTATATGTTCTCATGATGTATGTATCAGCATACCCA GTGCTGGTTACCATGAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAACACGGAC GACGAGACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGACAAGAT GCATCCACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGACCTTTGG TGGATCGCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCATATTCG ACCCTGAATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGCTCGAAT GCCTCGTTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGCCACAGG GGTCTTCCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAAGATGCT GCTATGAGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |
| Gene | >Ani_SJS72_1|g2324.t1 ATGCCCTCACCTATGAGTGACCAGTCCACAATCATACTCGCTAACAGATCGGGTTATATCCATCACAAGCCACCA GAAGTGGTATGAATCTCATTGATATCTGAATTATTTTGGAATCAAAACTGACACGAGAGGTGCACGACCTTAGCC TCGCATGTATAGCGGGATCGACTGTCAGGACAACCCCAACCTTGTATGACATTATACCAGCTACAGAATCCAAAG TACTGTGAGATACCCATGATATGACATAATGAGCCCATAACTAATGCAGAATTGGAACACAGGTGTTTCCTACAC AGGAATGGGTTGAATCGAGCGTGAAAGTCAATTGCGTGGTTTACCTGGCAAAGATAATGAATAAGGAAACTGCAG AAGTACTGAGGTTGGCTTCCAATTAGTGAATGTGCGGGCCATGACTGATGACTTGGGCTTGCGATGCATATGACA CAAACTGCCCAGGTCACTGTCTCGCAATGTTCGTCTGATATCCAGGCACAGGGTAACATCGGCACCCGTGGCAAT CAAGCACCAAGAACAGACCCAGAGAAGAGCGGTGAACAATTGTGCTGGAGGATAGCATGAGCAGCCACCATTCAA TTATATGTTTAATCAGACTGCAATTCTCATCCTTAGATGGCAGCCCACCTTGAAGACAGGGGGAGGAAGAGCCCT ACAGGGAATTATGAAATGAAGCCGAATGCAGTGGGGGCGAAGATCAAATCTCGGCCCGCAAGTGCTTAATCACGT TGCCGTCCCACGAAATCCCAGCCGTTTTTTCTTTGCCGCAGGCTTTTTCGCTCTTTCTTTCCTACAAACACAACA ACTTTTGAAACAACCTGAGTCTTATTGTCGAAATGTTCGCTGCAATGGAATAACATACGCTTTTTCGCCGATTTT ATCTTTCCAAGTTTGACCATCAGATCACTAAACTAGGAAACCCCGAACTTTGTTTTGCCTTACCCAAGCTACTAT CGCGACCCTTGCCGAAGATAAACCCTGTGTCTACTACTATTAACTGCTATCTACTGTAGCACTGCGTCGACACCA AAGCCCTCTAACCACTCATATTGTTTACCATTCAGGTCATCTCACCCTCAGTGACCTTGACTGGACTGCTTATGC CACAACTGATCAGAAATCGAAACATGAATTATCGTACACGTCTAAGAACCCTTCAGAAATTTTTGCAAAACCCTT GTGGCTAGCGGTGTGCGCCCCCCCCACAGCCGCCTGATCTTCTTGACAAAACTTGCGCGCGTCGCAGCCTGCCAG CATGACTTGTGAGTCGGTCTTTGCTTAAATGCCTCTTGCCTTTTATTTCCCGCTGTAGTCCTTCAACATGGCCTG CATCTTTGCCCCTTGCATGTCATCATGGCTACGAAAGCAGCCACAAGCATCTAAGAAAGAGGAGAAGGATTACTA TATCCACCATCTCAGATCCCACAATCTAGTGGTTCTCAATTACTGACATGACGGATCCCTAGCTCGAGGCTGGCG GCAGCTTCTGAGTCGAAGCATAATTGCCATGCTTCCGCCATTCAACTTCCTCACGCTTCATTATGTATACTTCAT TGCGACGTCTTTGATATGCAGCGTCATATTCTGGGGTTCCTCGACTCCGCGGCGCAGTGTTTCATACACAGACTC CCTATTTCTATGCATCAGTGCCATGACGGGTGCTGGCTTAAATACCGTATGTTGCTTTCCCATCCCTCGATAGAG CTAGTAAAGTAACTCGTAACAGGTCGACCTGTCTTCCCTGAATTCGTTCCAACAGTCTATCCTCTTCGCACTCTT ACTGTTGGGGCATGCTATTCTCATCTCAATAACGGTGCTCTTCGTCAGGATGGGCGCGTTTCAAGCCAAATTTAA AGGCATATCACTTGAACGTGCCCGTAAAGCACTACAGCAACAACTGGTAGGACAAGACACCATACTTGAACCAAT CCAAGAGAGTGTTGCCAGCGAGGAACACTATCAGCTGGCGAAGATTGACGGTGCTACCCTTGATGTCAAGCACGC GGTGACAGCAGGAGCTGCACCCGCAGATAAGTGCAACGACGTGCGAGATGACGACCAGATCCGATGGGTCGACGA TGATCAAGTCACCCTCAGCCATATGAGGGCACGTCAAAAGCACCATCATCACCACCGCGTTTTCCCCATGGTAGG CGTTGGGGCCCGTCTTGACTTGAACAACCACCCCCGAGATGCTGCGCCAAGAATGACCCAGAATGATGGAGATAC AGATTTACCTGCCCTCAAAGGCCTTATCAAGGGCACACAAAAATACTTTAGGTCAAAAGGATCTATCGCACGAAA TTCCCAGTTCCATGGGCTTACCCCTGAAGAGCGAGAGAGACTGGGAGGTGTCGAGTATAAGGCCGTTTCCTTACT ACTGGTCATTGTTGCCCTCTACTGGATCCTGTTCCTCATTTGTGGTATCATTGGGATGGGTACCTGGATCGCAGT GAATCATCCAGATATACCTCGATCAAACGGCCTATCGCCTTTCTGGACAGGCGCATTTTTTGCTGTGTCTGCATT TGTGAACAGCGGCATGTCGCTCTTGGATGCGAATATGACTGCATTCCAGACAAAGTATGATCTCCCCTGTGTGCA TTGTGTCTGAAAGCATGCTGATTGTTATATAGTGCGTACCCTTTGCTTACCATGGCATTCTTGATTCTGTCTGGG AACACGCTTTACCCATGCTTCTTGCGGTTTATTATCTGGGCAATGAGATGCTTGATCCCAGATAAGCCGTCATGG GCGACATGGAAGGTTACTCTGGACTTCATCCTTGACCATCCTAGAAGGGTATGCCGCCGGATTCCAGGTTTCTTC ACAGTTTTCTACGCTAACCTAAGCGCAGGTTTACACAAACCTCTTCCCGAGAAGACATACATGGTACTTGCTCGG TACCATTATCATCTTGAATGCGATCGACTGGGCTGGCTTCGAAGTCCTTTCAATCGGAAACAAGGAGATTGAAAG CTTGCCAACAGGGTATCGAGTCCTAGACGGACTGTTCCAGGCTTGTGGTTCGTATACAACTTAACTTTGCTGTGG GTCAAATCTTCATCTGACACACTGTGTTGTCCAGCTGTACGAGCGGGAGGCTTCTACGTCGTTACGATTGCGGAC CTCCGTCAGGGACTACTCGTTCTATATGGTAAGCACTTGTTTCCCCAAGCTTTAATCAGAATTATACTAACGTTC CACAGTTCTCATGATGGTCAGTATATTAGTAGTTTGTAGTCGACACAGATCAAACTAACCTTATATGTATGTAGT ATGTATCAGCATACCCAGTGCTGGTTACCATGAGGTCAGTAACAATCGCTCCTCTCCTTCCTCCCAACCACCCAC TAACGACCACAGAAACACAAACGTATACGAAGAGCGCTCCCTCGGAATCTACGCTCACGACAACACGGACGACGA GACCGAAGAGAAGGCCTCACCAAACATGCTCATCCAATTAGTCCGACACCACCTCCTCGGCCGACAAGATGCATC CACCCCCGAAGCATCCCGCAGTTACTTCGTCCACCAGCAACTGCGTTCCCAACTGAGCCATGACCTTTGGTGGAT CGCCCTCGCGGTCTTCCTCATTGCCATCGCGGAATCAGGAAACTACAGCCGCATGCCCGTGGCATATTCGACCCT GAATATCATTTTCGAGGTCGTCTCCGCCTACGGTTGCGTCGGCATCAGTGTGGGCTTTCCGAGCTCGAATGCCTC GTTCTGTAGCTCCTGGCATACCATCAGCAAACTTATCTTGGCGGCTGTTATGCTGCGCGGTCGCCACAGGGGTCT TCCGGTCGCTATTGATCGCGCTGTCATGCTACCGAATGAGTCCCTTGAGTGGGCGGAGGAGGAAGATGCTGCTAT GAGACGTGAGCAGTCTCGTGCTTGGGGGAGTGATAAGATGCCTGTGGGATCAGTTTAA |