© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2294.t1 |
| Gene name | |
| Location | scaffold_011:285030..286727 |
| Strand | + |
| Gene length (bp) | 1697 |
| Transcript length (bp) | 1632 |
| Coding sequence length (bp) | 1632 |
| Protein length (aa) | 544 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01151 | ELO | GNS1/SUR4 family | 2.8E-90 | 59 | 414 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0009922 | fatty acid elongase activity | Yes |
| GO:0004312 | fatty acid synthase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 83 | 22 |
| 2 | 104 | 126 | 22 |
| 3 | 247 | 269 | 22 |
| 4 | 290 | 312 | 22 |
| 5 | 383 | 405 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2294.t1 MYDFTVHGEANPAVIRVGLPPSSLLKFPPSELPATVPAPVISEPTWNQPFNIPPKLYNQLLDVRVPITIASVYAV TVVLVNRLNKSRGYKPYGFSQTRLFKLFVILHNVFLAIYSAWTFAGMIRAFRSSWPSRDDPNYVAAVADTLCKIN GPRGYGNAATYDTTVDQWTFRNPEFSLAAGGVPDPSDLGRLWNEGLAFLGWIFYLSKFYEVLDTVIILAKGKKSS TLQTYHHAGAMMCMWAGIRYVAAPIWIFTLVNSGIHALMYTYYTVTALRIRVPTVIKRSLTTMQITQFVIGSAMA ASYLFFSYTLPVGQTAPASPVDTPTVPAGTAGAGLVPWLKKLGFRAAGAEGIAENVGVPEAAAGVRVLHVGPMVT CMDTSGQGFAIWLNVMYLLPLTYLFARFFVRSYLYRKEPGPRQPTQLHAAEKAGMDALRGVSREIRKAVEVNGET SEATEDEAVNKIQALRATKNQQKPAENSPIRTRATAAKQKSRVAGSDADSDSGFSTVSSKKGAKKATKEELQSST IVVDPKASNPYEVLDRSA* |
| Coding | >Ani_SJS72_1|g2294.t1 ATGTACGACTTCACCGTCCACGGCGAGGCGAACCCAGCCGTCATTCGCGTCGGCCTGCCTCCTTCGTCCCTCTTG AAGTTCCCTCCCAGCGAGCTCCCGGCAACCGTCCCCGCTCCTGTGATCTCCGAGCCGACATGGAACCAGCCCTTC AACATCCCGCCGAAGCTCTACAACCAGCTGTTGGACGTGCGCGTTCCGATTACAATCGCGAGTGTGTACGCTGTG ACGGTGGTCCTCGTCAATCGCCTTAACAAGAGTCGGGGCTACAAGCCTTACGGATTCAGCCAGACGCGTCTCTTC AAGCTTTTCGTCATCCTCCACAACGTTTTCCTGGCTATTTACTCGGCATGGACTTTTGCGGGCATGATCCGTGCG TTCCGCAGCTCATGGCCCAGTCGGGATGATCCCAACTACGTCGCAGCTGTTGCCGATACGCTGTGCAAGATCAAT GGACCCCGGGGTTACGGTAACGCGGCTACGTACGACACTACCGTTGACCAGTGGACCTTCCGCAACCCCGAGTTC AGTCTGGCTGCAGGAGGTGTTCCGGACCCCTCCGATCTTGGTCGTCTCTGGAATGAGGGTCTGGCCTTCCTCGGC TGGATCTTCTACCTGTCCAAGTTCTACGAGGTCCTTGACACCGTCATCATTCTGGCCAAGGGTAAGAAGAGCTCG ACCCTGCAGACGTACCATCACGCCGGTGCCATGATGTGCATGTGGGCAGGTATCCGTTACGTCGCAGCTCCTATC TGGATCTTCACCTTGGTCAATTCTGGAATTCATGCTTTGATGTACACCTACTACACTGTGACTGCTCTGCGCATC CGCGTCCCCACCGTGATCAAGAGGTCCTTGACCACCATGCAGATTACCCAGTTTGTCATTGGCTCTGCCATGGCT GCCTCCTACCTGTTTTTCAGCTACACTCTTCCTGTGGGCCAGACCGCTCCGGCCTCTCCTGTTGACACCCCGACT GTGCCGGCGGGTACTGCCGGTGCTGGACTTGTGCCATGGCTCAAGAAGCTCGGGTTCCGCGCTGCGGGCGCGGAA GGTATTGCTGAGAACGTGGGCGTCCCGGAGGCTGCTGCTGGTGTGCGCGTCCTTCATGTCGGACCGATGGTTACC TGCATGGACACCAGCGGCCAGGGTTTCGCCATCTGGCTCAACGTGATGTACCTTTTGCCTTTGACCTACCTCTTT GCCCGGTTCTTCGTTCGTTCGTACCTCTACCGTAAGGAGCCCGGTCCCCGGCAGCCGACTCAGCTGCACGCCGCT GAGAAAGCCGGAATGGATGCTCTGCGAGGCGTGAGCCGCGAGATTCGCAAGGCCGTTGAGGTGAACGGAGAGACC AGTGAAGCTACCGAAGATGAGGCTGTGAACAAGATCCAGGCCCTCCGGGCAACGAAGAACCAGCAGAAGCCTGCC GAGAACTCTCCTATTCGCACCCGCGCAACTGCTGCCAAGCAGAAATCGCGTGTCGCGGGCAGCGATGCCGACTCC GACTCGGGTTTCTCGACCGTCAGCAGCAAGAAGGGTGCCAAGAAGGCGACTAAGGAAGAACTGCAGAGCTCTACC ATTGTCGTGGACCCCAAAGCCTCTAACCCGTACGAGGTTCTGGATCGCTCGGCATAA |
| Transcript | >Ani_SJS72_1|g2294.t1 ATGTACGACTTCACCGTCCACGGCGAGGCGAACCCAGCCGTCATTCGCGTCGGCCTGCCTCCTTCGTCCCTCTTG AAGTTCCCTCCCAGCGAGCTCCCGGCAACCGTCCCCGCTCCTGTGATCTCCGAGCCGACATGGAACCAGCCCTTC AACATCCCGCCGAAGCTCTACAACCAGCTGTTGGACGTGCGCGTTCCGATTACAATCGCGAGTGTGTACGCTGTG ACGGTGGTCCTCGTCAATCGCCTTAACAAGAGTCGGGGCTACAAGCCTTACGGATTCAGCCAGACGCGTCTCTTC AAGCTTTTCGTCATCCTCCACAACGTTTTCCTGGCTATTTACTCGGCATGGACTTTTGCGGGCATGATCCGTGCG TTCCGCAGCTCATGGCCCAGTCGGGATGATCCCAACTACGTCGCAGCTGTTGCCGATACGCTGTGCAAGATCAAT GGACCCCGGGGTTACGGTAACGCGGCTACGTACGACACTACCGTTGACCAGTGGACCTTCCGCAACCCCGAGTTC AGTCTGGCTGCAGGAGGTGTTCCGGACCCCTCCGATCTTGGTCGTCTCTGGAATGAGGGTCTGGCCTTCCTCGGC TGGATCTTCTACCTGTCCAAGTTCTACGAGGTCCTTGACACCGTCATCATTCTGGCCAAGGGTAAGAAGAGCTCG ACCCTGCAGACGTACCATCACGCCGGTGCCATGATGTGCATGTGGGCAGGTATCCGTTACGTCGCAGCTCCTATC TGGATCTTCACCTTGGTCAATTCTGGAATTCATGCTTTGATGTACACCTACTACACTGTGACTGCTCTGCGCATC CGCGTCCCCACCGTGATCAAGAGGTCCTTGACCACCATGCAGATTACCCAGTTTGTCATTGGCTCTGCCATGGCT GCCTCCTACCTGTTTTTCAGCTACACTCTTCCTGTGGGCCAGACCGCTCCGGCCTCTCCTGTTGACACCCCGACT GTGCCGGCGGGTACTGCCGGTGCTGGACTTGTGCCATGGCTCAAGAAGCTCGGGTTCCGCGCTGCGGGCGCGGAA GGTATTGCTGAGAACGTGGGCGTCCCGGAGGCTGCTGCTGGTGTGCGCGTCCTTCATGTCGGACCGATGGTTACC TGCATGGACACCAGCGGCCAGGGTTTCGCCATCTGGCTCAACGTGATGTACCTTTTGCCTTTGACCTACCTCTTT GCCCGGTTCTTCGTTCGTTCGTACCTCTACCGTAAGGAGCCCGGTCCCCGGCAGCCGACTCAGCTGCACGCCGCT GAGAAAGCCGGAATGGATGCTCTGCGAGGCGTGAGCCGCGAGATTCGCAAGGCCGTTGAGGTGAACGGAGAGACC AGTGAAGCTACCGAAGATGAGGCTGTGAACAAGATCCAGGCCCTCCGGGCAACGAAGAACCAGCAGAAGCCTGCC GAGAACTCTCCTATTCGCACCCGCGCAACTGCTGCCAAGCAGAAATCGCGTGTCGCGGGCAGCGATGCCGACTCC GACTCGGGTTTCTCGACCGTCAGCAGCAAGAAGGGTGCCAAGAAGGCGACTAAGGAAGAACTGCAGAGCTCTACC ATTGTCGTGGACCCCAAAGCCTCTAACCCGTACGAGGTTCTGGATCGCTCGGCATAA |
| Gene | >Ani_SJS72_1|g2294.t1 ATGTACGACTTCACCGTCCACGGCGAGGCGAACCCAGCCGTCATTCGCGTCGGCCTGCCTCCTTCGTCCCTCTTG AAGTTCCCTCCCAGCGAGCTCCCGGCAACCGTCCCCGCTCCTGTGATCTCCGAGCCGACATGGAACCAGCCCTTC AACATCCCGCCGAAGCTCTACAACCAGCTGTTGGACGTGCGCGTTCCGATTACAATCGCGAGTGTGTACGCTGTG ACGGTGGTCCTCGTCAATCGCCTTAACAAGAGTCGGGGCTACAAGCCTTACGGATTCAGCCAGACGCGTCTCTTC AAGCTTTTCGTCATCCTCCACAACGTTTTCCTGGCTATTTACTCGGCATGGACTTTTGCGGGCATGATCCGTGCG TTCCGCAGCTCATGGCCCAGTCGGGATGATCCCAACTACGTCGCAGCTGTTGCCGATACGCTGTGCAAGATCAAT GGACCCCGGGGTTACGGTAACGCGGCTACGTACGACACTACCGTTGACCAGTGGACCTTCCGCAACCCCGAGTTC AGTCTGGCTGCAGGAGGTGTTCCGGACCCCTCCGATCTTGGTCGTCTCTGGAATGAGGGTCTGGCCTTCCTCGGC TGGATCTTCTACCTGTCCAAGTTCTACGAGGTCCTTGACACCGTCATCATTCTGGCCAAGGGTAAGAAGAGCTCG ACCCTGCAGACGTACCATCACGCCGGTGCCATGATGTGCATGTGGGCAGGTATCCGTTACGTCGCAGCTCCTATC TGGATCTTCACCTTGGTCAATTCTGGAATTCATGCTTTGATGGTATGTGAAGCACGCCCCGTATTGTGTTTCGTC TGTTGCTCATATGTTCTGACCGTCAAATGCAGTACACCTACTACACTGTGACTGCTCTGCGCATCCGCGTCCCCA CCGTGATCAAGAGGTCCTTGACCACCATGCAGATTACCCAGTTTGTCATTGGCTCTGCCATGGCTGCCTCCTACC TGTTTTTCAGCTACACTCTTCCTGTGGGCCAGACCGCTCCGGCCTCTCCTGTTGACACCCCGACTGTGCCGGCGG GTACTGCCGGTGCTGGACTTGTGCCATGGCTCAAGAAGCTCGGGTTCCGCGCTGCGGGCGCGGAAGGTATTGCTG AGAACGTGGGCGTCCCGGAGGCTGCTGCTGGTGTGCGCGTCCTTCATGTCGGACCGATGGTTACCTGCATGGACA CCAGCGGCCAGGGTTTCGCCATCTGGCTCAACGTGATGTACCTTTTGCCTTTGACCTACCTCTTTGCCCGGTTCT TCGTTCGTTCGTACCTCTACCGTAAGGAGCCCGGTCCCCGGCAGCCGACTCAGCTGCACGCCGCTGAGAAAGCCG GAATGGATGCTCTGCGAGGCGTGAGCCGCGAGATTCGCAAGGCCGTTGAGGTGAACGGAGAGACCAGTGAAGCTA CCGAAGATGAGGCTGTGAACAAGATCCAGGCCCTCCGGGCAACGAAGAACCAGCAGAAGCCTGCCGAGAACTCTC CTATTCGCACCCGCGCAACTGCTGCCAAGCAGAAATCGCGTGTCGCGGGCAGCGATGCCGACTCCGACTCGGGTT TCTCGACCGTCAGCAGCAAGAAGGGTGCCAAGAAGGCGACTAAGGAAGAACTGCAGAGCTCTACCATTGTCGTGG ACCCCAAAGCCTCTAACCCGTACGAGGTTCTGGATCGCTCGGCATAA |