Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2258.t1
Gene name
Locationscaffold_011:179178..179650
Strand+
Gene length (bp)472
Transcript length (bp)225
Coding sequence length (bp)225
Protein length (aa) 75

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07225 NDUF_B4 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) 6.2E-05 5 39

GO

GO Term Description Terminal node
GO:0005739 mitochondrion Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0043226 organelle No
GO:0043229 intracellular organelle No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043227 membrane-bounded organelle No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 51 0.5

Transmembrane Domains

Domain # Start End Length
1 35 54 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2258.t1
MAGPSKSLILDPALQKYYELNANRYKYFRWTPRHAWFSFLYMALIPGALGYVAYKTDGLYQLRGKRRGDTIVEW*
Coding >Ani_SJS72_1|g2258.t1
ATGGCCGGTCCCAGCAAGTCTTTGATCCTTGATCCGGCCCTCCAGAAATACTACGAACTCAACGCCAACCGCTAC
AAGTACTTCCGGTGGACGCCGCGCCATGCCTGGTTCTCGTTCCTCTACATGGCTTTGATTCCCGGTGCGCTGGGC
TATGTCGCTTATAAGACTGATGGTCTGTACCAGCTGCGTGGAAAGCGCAGGGGCGATACGATTGTCGAGTGGTAG
Transcript >Ani_SJS72_1|g2258.t1
ATGGCCGGTCCCAGCAAGTCTTTGATCCTTGATCCGGCCCTCCAGAAATACTACGAACTCAACGCCAACCGCTAC
AAGTACTTCCGGTGGACGCCGCGCCATGCCTGGTTCTCGTTCCTCTACATGGCTTTGATTCCCGGTGCGCTGGGC
TATGTCGCTTATAAGACTGATGGTCTGTACCAGCTGCGTGGAAAGCGCAGGGGCGATACGATTGTCGAGTGGTAG
Gene >Ani_SJS72_1|g2258.t1
ATGGCCGGTCCCAGCAAGTGTATGTCCTTCGCCTCTAAATCTTCTCAATGCCAATTGCTAACCGCTATCTGCAGC
TTTGATCCTTGATCCGGCCCTCCAGAAATACTACGGTCCGTTTGTTCCCGCCAATAAGACTCGACGCATTACAGT
GCTCCTCCAGCGATAGCAATTGCTACTTATGAAGGAGTTCGGATGGATGAGGGATGATAAATGACTGACGAAGTG
GTATCTTGCAGAACTCAACGCCAACCGCTACAAGTACTTCCGGTGGACGCCGCGCCATGCCTGGTTCTCGTTCCT
CTACATGGCTTTGATTCCCGGTGCGCTGGGCTATGTCGCTTATAAGACTGATGTGAGTGATCTGGGTTTTGATTG
GGATCCGGTGGATGATAGGAGTGTGGCTAATGGGTATGTGTAGGGTCTGTACCAGCTGCGTGGAAAGCGCAGGGG
CGATACGATTGTCGAGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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