Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g2210.t1
Gene name
Locationscaffold_011:36134..36487
Strand-
Gene length (bp)353
Transcript length (bp)291
Coding sequence length (bp)291
Protein length (aa) 97

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15055 DUF4536 Domain of unknown function (DUF4536) 1.2E-07 29 68

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 73 95 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g2210.t1
MSPSIQNHSALDVQPKDAKRALAEDAYDDCLACRVTGSAAFVGLGVYSYYTGMKNLKMQEKAIMQSATKYKMGSR
QLGIFTISATLVGMGLWRAFN*
Coding >Ani_SJS72_1|g2210.t1
ATGTCTCCCTCTATCCAGAATCACAGCGCCTTGGATGTCCAGCCCAAGGATGCGAAGCGTGCACTTGCGGAGGAC
GCATATGATGACTGCCTGGCGTGCAGAGTTACTGGATCTGCTGCATTCGTCGGCCTCGGTGTGTATAGCTACTAC
ACAGGAATGAAGAACCTCAAGATGCAAGAAAAGGCAATCATGCAAAGCGCAACAAAGTATAAGATGGGATCTCGA
CAACTCGGGATCTTCACCATCTCTGCGACACTGGTTGGAATGGGATTATGGAGAGCCTTCAACTGA
Transcript >Ani_SJS72_1|g2210.t1
ATGTCTCCCTCTATCCAGAATCACAGCGCCTTGGATGTCCAGCCCAAGGATGCGAAGCGTGCACTTGCGGAGGAC
GCATATGATGACTGCCTGGCGTGCAGAGTTACTGGATCTGCTGCATTCGTCGGCCTCGGTGTGTATAGCTACTAC
ACAGGAATGAAGAACCTCAAGATGCAAGAAAAGGCAATCATGCAAAGCGCAACAAAGTATAAGATGGGATCTCGA
CAACTCGGGATCTTCACCATCTCTGCGACACTGGTTGGAATGGGATTATGGAGAGCCTTCAACTGA
Gene >Ani_SJS72_1|g2210.t1
ATGTCTCCCTCTATCCAGAATCACAGCGCCTTGGATGTCCAGCCCAAGGATGCGAAGCGTGCACTTGCGGAGGAC
GCATATGATGACTGCCTGGCGTGCAGAGTTACTGGTAGGCTACTTTTTGTTTCCGGGCGTTCACTATGGTACTAT
AGCTAATCCGATGACTTACAGGATCTGCTGCATTCGTCGGCCTCGGTGTGTATAGCTACTACACAGGAATGAAGA
ACCTCAAGATGCAAGAAAAGGCAATCATGCAAAGCGCAACAAAGTATAAGATGGGATCTCGACAACTCGGGATCT
TCACCATCTCTGCGACACTGGTTGGAATGGGATTATGGAGAGCCTTCAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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