© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2199.t1 |
| Gene name | |
| Location | scaffold_011:526..2827 |
| Strand | + |
| Gene length (bp) | 2301 |
| Transcript length (bp) | 2235 |
| Coding sequence length (bp) | 2235 |
| Protein length (aa) | 745 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06011 | TRP | Transient receptor potential (TRP) ion channel | 3.5E-167 | 168 | 611 |
| PF14558 | TRP_N | ML-like domain | 7.6E-42 | 27 | 163 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 22 | 0.999768 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 332 | 354 | 22 |
| 2 | 385 | 407 | 22 |
| 3 | 412 | 434 | 22 |
| 4 | 473 | 495 | 22 |
| 5 | 499 | 521 | 22 |
| 6 | 532 | 554 | 22 |
| 7 | 569 | 591 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 2451 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2199.t1 MRLISMFIGLLVVLLNSPQAAAVKLIESNALSICQDSSNFTATYFSVTFTPGNRSLTFSFDGVSAISGKVTAELV LEAYGIQVLTKTLDPCEMDLTGLCPMNAGTIDVPKAVITVPESVVKSIPNIAYTVPDLDANVRIYINSTTTGEAI TCVEASLSNGKTVYQKGVGWTTAIISGLGLAASAITSGLGHSNTAAHVAANALSLFGFMQSQAMIGMTSVAMPPI VESWTQNFQWSMGIIHVGFLETICTWYQRSTGGTASTLLSDLSTTSVQLYRRKRSLDDEPIVRKATGYFKHWQKR SDASTQTATDSSVIVRGIERVGFKAGIETTNIFLTGLIFFVVFVALVMALVAVFKLGCEVLAKNGKMKGDKFQEF RNGWKVVARGILFRLTLIGFPQMCVLCLWEFTRVDSAAEVVLAVIMFLSVVAALGWAALKVLRLAKRSVIMHKNP AYILYSDPTCLNKWGFLYVQYRATAYYFIVPFLGYILIKGLFIGLSQPAPVVQTIALVIIEAAMLIAVSVLRPWM DKKTNIYNISIAAINFLNTIFLLFFSDVFNQPGIVTGVMGVVFFVYNAVFALVLLILVLIASVYAIVSKNPDTRY QPMRDDRGSFIKNGGQLTTELDALGATARGDMKGSPYQSSPFEDDNTSFSSGNGASVSRQNLEAPDAQTHQTARH SPVSPVDPSLPLFPSDTSARNGPPAYDANFGRSPSPVPRNYNSSPFQNPHAYRQQNNPSPWQRGAGYDH* |
| Coding | >Ani_SJS72_1|g2199.t1 ATGCGATTAATATCCATGTTCATCGGCCTTCTGGTCGTCCTGCTCAACTCCCCGCAGGCGGCCGCCGTCAAGCTC ATCGAGTCCAATGCTCTTAGTATTTGCCAGGACAGTTCGAATTTCACGGCCACTTACTTCAGTGTTACATTCACA CCCGGAAACCGCTCGCTCACCTTCAGCTTCGATGGAGTGTCTGCAATTTCTGGAAAGGTCACTGCAGAGCTCGTG CTCGAGGCCTACGGTATCCAGGTGTTGACCAAGACTCTCGACCCCTGTGAGATGGATCTTACTGGACTCTGTCCC ATGAATGCAGGCACGATCGATGTTCCGAAAGCCGTCATTACCGTGCCTGAGTCGGTGGTCAAGTCTATTCCAAAC ATTGCATACACCGTCCCGGATCTTGATGCCAACGTGCGGATCTATATCAACTCTACCACCACCGGTGAAGCCATT ACCTGTGTGGAAGCATCCCTCTCCAACGGCAAGACAGTTTATCAAAAGGGTGTCGGCTGGACTACAGCCATTATC TCCGGTCTCGGTCTTGCTGCCTCTGCTATCACCTCTGGATTAGGACATTCGAACACGGCTGCTCACGTCGCGGCT AATGCGCTCTCGCTCTTCGGTTTCATGCAGTCTCAAGCGATGATTGGTATGACATCCGTCGCCATGCCTCCGATC GTGGAGTCTTGGACCCAGAATTTCCAGTGGAGTATGGGTATCATCCATGTGGGCTTCCTGGAAACTATCTGTACA TGGTATCAGCGCTCGACTGGAGGGACGGCTTCGACCCTTCTTTCGGACTTGTCCACTACGTCCGTTCAACTCTAC AGACGCAAGCGCTCCCTCGATGATGAGCCCATTGTCCGGAAGGCCACTGGGTATTTCAAGCATTGGCAGAAACGT TCGGATGCCAGTACCCAGACTGCCACGGATTCTAGCGTCATTGTTCGTGGTATTGAGCGTGTTGGTTTCAAGGCT GGAATTGAAACCACCAACATCTTCCTTACCGGTCTTATCTTCTTCGTTGTATTCGTTGCGCTGGTGATGGCCCTA GTTGCTGTTTTCAAGCTTGGCTGTGAGGTCCTTGCTAAGAACGGCAAGATGAAGGGGGATAAATTCCAAGAGTTC CGTAACGGATGGAAGGTTGTCGCACGTGGAATCCTGTTCCGACTTACGCTGATCGGCTTCCCCCAAATGTGTGTA CTCTGCCTGTGGGAATTCACTCGGGTAGACTCAGCTGCGGAGGTGGTTCTTGCTGTGATCATGTTCCTTTCGGTG GTTGCAGCGCTGGGCTGGGCAGCATTGAAGGTGTTGCGTCTGGCCAAGCGATCTGTCATCATGCACAAGAACCCG GCTTATATCCTCTACTCTGACCCTACCTGCCTGAATAAGTGGGGCTTCTTGTATGTCCAGTACCGCGCAACTGCG TACTACTTCATTGTCCCGTTCTTGGGCTACATCCTGATCAAGGGCCTTTTCATTGGCTTGAGTCAGCCCGCCCCG GTCGTGCAAACCATCGCCCTCGTCATCATTGAAGCTGCTATGCTCATTGCTGTCAGCGTCCTCCGGCCCTGGATG GACAAGAAGACCAATATCTACAACATTTCGATTGCCGCCATTAACTTCCTCAACACGATTTTCCTGCTATTCTTC TCGGATGTGTTCAACCAACCCGGAATTGTCACTGGTGTTATGGGTGTTGTTTTCTTCGTCTACAACGCTGTCTTT GCTCTGGTGTTGTTGATTCTGGTCTTGATCGCATCTGTTTACGCCATCGTTTCCAAGAACCCCGACACGCGGTAC CAGCCCATGAGAGATGACCGGGGTTCGTTCATTAAGAACGGGGGTCAGTTGACCACCGAACTGGATGCTCTGGGT GCTACCGCCCGTGGAGACATGAAGGGGTCGCCGTACCAATCCAGTCCGTTTGAGGATGACAACACGTCCTTCTCG AGCGGAAACGGTGCCAGTGTTAGCCGCCAGAATCTCGAAGCCCCTGATGCTCAGACACACCAGACCGCTCGTCAT TCCCCGGTTTCCCCTGTCGACCCGTCTTTGCCGCTGTTCCCCAGCGACACCTCGGCCCGCAATGGCCCTCCTGCC TACGATGCTAATTTCGGGCGTTCGCCGTCTCCTGTACCACGGAACTACAACAGCTCCCCCTTCCAAAACCCACAT GCATACCGGCAACAAAACAACCCGAGCCCATGGCAACGGGGAGCAGGTTATGACCACTGA |
| Transcript | >Ani_SJS72_1|g2199.t1 ATGCGATTAATATCCATGTTCATCGGCCTTCTGGTCGTCCTGCTCAACTCCCCGCAGGCGGCCGCCGTCAAGCTC ATCGAGTCCAATGCTCTTAGTATTTGCCAGGACAGTTCGAATTTCACGGCCACTTACTTCAGTGTTACATTCACA CCCGGAAACCGCTCGCTCACCTTCAGCTTCGATGGAGTGTCTGCAATTTCTGGAAAGGTCACTGCAGAGCTCGTG CTCGAGGCCTACGGTATCCAGGTGTTGACCAAGACTCTCGACCCCTGTGAGATGGATCTTACTGGACTCTGTCCC ATGAATGCAGGCACGATCGATGTTCCGAAAGCCGTCATTACCGTGCCTGAGTCGGTGGTCAAGTCTATTCCAAAC ATTGCATACACCGTCCCGGATCTTGATGCCAACGTGCGGATCTATATCAACTCTACCACCACCGGTGAAGCCATT ACCTGTGTGGAAGCATCCCTCTCCAACGGCAAGACAGTTTATCAAAAGGGTGTCGGCTGGACTACAGCCATTATC TCCGGTCTCGGTCTTGCTGCCTCTGCTATCACCTCTGGATTAGGACATTCGAACACGGCTGCTCACGTCGCGGCT AATGCGCTCTCGCTCTTCGGTTTCATGCAGTCTCAAGCGATGATTGGTATGACATCCGTCGCCATGCCTCCGATC GTGGAGTCTTGGACCCAGAATTTCCAGTGGAGTATGGGTATCATCCATGTGGGCTTCCTGGAAACTATCTGTACA TGGTATCAGCGCTCGACTGGAGGGACGGCTTCGACCCTTCTTTCGGACTTGTCCACTACGTCCGTTCAACTCTAC AGACGCAAGCGCTCCCTCGATGATGAGCCCATTGTCCGGAAGGCCACTGGGTATTTCAAGCATTGGCAGAAACGT TCGGATGCCAGTACCCAGACTGCCACGGATTCTAGCGTCATTGTTCGTGGTATTGAGCGTGTTGGTTTCAAGGCT GGAATTGAAACCACCAACATCTTCCTTACCGGTCTTATCTTCTTCGTTGTATTCGTTGCGCTGGTGATGGCCCTA GTTGCTGTTTTCAAGCTTGGCTGTGAGGTCCTTGCTAAGAACGGCAAGATGAAGGGGGATAAATTCCAAGAGTTC CGTAACGGATGGAAGGTTGTCGCACGTGGAATCCTGTTCCGACTTACGCTGATCGGCTTCCCCCAAATGTGTGTA CTCTGCCTGTGGGAATTCACTCGGGTAGACTCAGCTGCGGAGGTGGTTCTTGCTGTGATCATGTTCCTTTCGGTG GTTGCAGCGCTGGGCTGGGCAGCATTGAAGGTGTTGCGTCTGGCCAAGCGATCTGTCATCATGCACAAGAACCCG GCTTATATCCTCTACTCTGACCCTACCTGCCTGAATAAGTGGGGCTTCTTGTATGTCCAGTACCGCGCAACTGCG TACTACTTCATTGTCCCGTTCTTGGGCTACATCCTGATCAAGGGCCTTTTCATTGGCTTGAGTCAGCCCGCCCCG GTCGTGCAAACCATCGCCCTCGTCATCATTGAAGCTGCTATGCTCATTGCTGTCAGCGTCCTCCGGCCCTGGATG GACAAGAAGACCAATATCTACAACATTTCGATTGCCGCCATTAACTTCCTCAACACGATTTTCCTGCTATTCTTC TCGGATGTGTTCAACCAACCCGGAATTGTCACTGGTGTTATGGGTGTTGTTTTCTTCGTCTACAACGCTGTCTTT GCTCTGGTGTTGTTGATTCTGGTCTTGATCGCATCTGTTTACGCCATCGTTTCCAAGAACCCCGACACGCGGTAC CAGCCCATGAGAGATGACCGGGGTTCGTTCATTAAGAACGGGGGTCAGTTGACCACCGAACTGGATGCTCTGGGT GCTACCGCCCGTGGAGACATGAAGGGGTCGCCGTACCAATCCAGTCCGTTTGAGGATGACAACACGTCCTTCTCG AGCGGAAACGGTGCCAGTGTTAGCCGCCAGAATCTCGAAGCCCCTGATGCTCAGACACACCAGACCGCTCGTCAT TCCCCGGTTTCCCCTGTCGACCCGTCTTTGCCGCTGTTCCCCAGCGACACCTCGGCCCGCAATGGCCCTCCTGCC TACGATGCTAATTTCGGGCGTTCGCCGTCTCCTGTACCACGGAACTACAACAGCTCCCCCTTCCAAAACCCACAT GCATACCGGCAACAAAACAACCCGAGCCCATGGCAACGGGGAGCAGGTTATGACCACTGA |
| Gene | >Ani_SJS72_1|g2199.t1 ATGCGATTAATATCCATGTTCATCGGCCTTCTGGTCGTCCTGCTCAACTCCCCGCAGGCGGCCGCCGTCAAGCTC ATCGAGTCCAATGCTCTTAGTATTTGCCAGGACAGTTCGAATTTCACGGCCACTTACTTCAGTGTTACATTCACA CCCGGAAACCGCTCGCTCACCTTCAGCTTCGATGGAGTGTCTGCAATTTCTGGAAAGGTCACTGCAGAGCTCGTG CTCGAGGCCTACGGTATCCAGGTGTTGACCAAGACTCTCGACCCCTGTGAGATGGATCTTACTGGACTCTGTCCC ATGAATGCAGGCACGATCGATGTTCCGAAAGCCGTCATTACCGTGCCTGAGTCGGTGGTCAAGTCTATTCCAAGT AAGTGATCTCCGCCATCGGCGGCCCCTTCGAGTGAGCCCTAGTTCACTGACAATTTGCGCGTAGACATTGCATAC ACCGTCCCGGATCTTGATGCCAACGTGCGGATCTATATCAACTCTACCACCACCGGTGAAGCCATTACCTGTGTG GAAGCATCCCTCTCCAACGGCAAGACAGTTTATCAAAAGGGTGTCGGCTGGACTACAGCCATTATCTCCGGTCTC GGTCTTGCTGCCTCTGCTATCACCTCTGGATTAGGACATTCGAACACGGCTGCTCACGTCGCGGCTAATGCGCTC TCGCTCTTCGGTTTCATGCAGTCTCAAGCGATGATTGGTATGACATCCGTCGCCATGCCTCCGATCGTGGAGTCT TGGACCCAGAATTTCCAGTGGAGTATGGGTATCATCCATGTGGGCTTCCTGGAAACTATCTGTACATGGTATCAG CGCTCGACTGGAGGGACGGCTTCGACCCTTCTTTCGGACTTGTCCACTACGTCCGTTCAACTCTACAGACGCAAG CGCTCCCTCGATGATGAGCCCATTGTCCGGAAGGCCACTGGGTATTTCAAGCATTGGCAGAAACGTTCGGATGCC AGTACCCAGACTGCCACGGATTCTAGCGTCATTGTTCGTGGTATTGAGCGTGTTGGTTTCAAGGCTGGAATTGAA ACCACCAACATCTTCCTTACCGGTCTTATCTTCTTCGTTGTATTCGTTGCGCTGGTGATGGCCCTAGTTGCTGTT TTCAAGCTTGGCTGTGAGGTCCTTGCTAAGAACGGCAAGATGAAGGGGGATAAATTCCAAGAGTTCCGTAACGGA TGGAAGGTTGTCGCACGTGGAATCCTGTTCCGACTTACGCTGATCGGCTTCCCCCAAATGTGTGTACTCTGCCTG TGGGAATTCACTCGGGTAGACTCAGCTGCGGAGGTGGTTCTTGCTGTGATCATGTTCCTTTCGGTGGTTGCAGCG CTGGGCTGGGCAGCATTGAAGGTGTTGCGTCTGGCCAAGCGATCTGTCATCATGCACAAGAACCCGGCTTATATC CTCTACTCTGACCCTACCTGCCTGAATAAGTGGGGCTTCTTGTATGTCCAGTACCGCGCAACTGCGTACTACTTC ATTGTCCCGTTCTTGGGCTACATCCTGATCAAGGGCCTTTTCATTGGCTTGAGTCAGCCCGCCCCGGTCGTGCAA ACCATCGCCCTCGTCATCATTGAAGCTGCTATGCTCATTGCTGTCAGCGTCCTCCGGCCCTGGATGGACAAGAAG ACCAATATCTACAACATTTCGATTGCCGCCATTAACTTCCTCAACACGATTTTCCTGCTATTCTTCTCGGATGTG TTCAACCAACCCGGAATTGTCACTGGTGTTATGGGTGTTGTTTTCTTCGTCTACAACGCTGTCTTTGCTCTGGTG TTGTTGATTCTGGTCTTGATCGCATCTGTTTACGCCATCGTTTCCAAGAACCCCGACACGCGGTACCAGCCCATG AGAGATGACCGGGGTTCGTTCATTAAGAACGGGGGTCAGTTGACCACCGAACTGGATGCTCTGGGTGCTACCGCC CGTGGAGACATGAAGGGGTCGCCGTACCAATCCAGTCCGTTTGAGGATGACAACACGTCCTTCTCGAGCGGAAAC GGTGCCAGTGTTAGCCGCCAGAATCTCGAAGCCCCTGATGCTCAGACACACCAGACCGCTCGTCATTCCCCGGTT TCCCCTGTCGACCCGTCTTTGCCGCTGTTCCCCAGCGACACCTCGGCCCGCAATGGCCCTCCTGCCTACGATGCT AATTTCGGGCGTTCGCCGTCTCCTGTACCACGGAACTACAACAGCTCCCCCTTCCAAAACCCACATGCATACCGG CAACAAAACAACCCGAGCCCATGGCAACGGGGAGCAGGTTATGACCACTGA |