Protein ID | Ani_SJS72_1|g2109.t1 |
Gene name | |
Location | scaffold_010:216845..218011 |
Strand | + |
Gene length (bp) | 1166 |
Transcript length (bp) | 1107 |
Coding sequence length (bp) | 1107 |
Protein length (aa) | 369 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 4.0E-24 | 190 | 317 |
PF13602 | ADH_zinc_N_2 | Zinc-binding dehydrogenase | 1.4E-12 | 222 | 358 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 5.4E-08 | 37 | 140 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g2109.t1 MSKAIFLNPIDGKPGKPGQVYYPLAVKTLPQPVPQGSEVLVKLTATSLNHRDVFLRQHLYPGVTFDVPMGADGTG TVIAAGEGVRDPQRWIGKRVVINPGVGWKDSPDGPEDPKGYRILGGTKSYNKGTMQEYLAVDEGELEEVPDHLSD AEAASFPLTGLTAWRALVVKAGERNSSKGAAVLVTGIGGGVALMALKLAVARGVDVYVTSSSEEKIRKAIELGAK GGVNYKQEKWEQKLLELLPTGKVAFDAIIDGAGGDSVDKAVKLLKPGGALCVYGMTVAPQMPFSMKAVLKNIDVR GCTMGSRKEFREMVEFIRAHKIHPVISRVLQTDLEDIPAIDEIFQDMKDGKQFGKLVIEFGKTSGSKL* |
Coding | >Ani_SJS72_1|g2109.t1 ATGTCAAAAGCCATCTTCCTCAACCCCATTGATGGTAAACCCGGCAAGCCGGGTCAAGTCTACTACCCCCTCGCT GTGAAGACCCTTCCCCAGCCTGTACCTCAAGGCAGCGAGGTTTTAGTAAAGCTCACAGCTACATCACTAAACCAT CGCGATGTGTTCCTTCGCCAACACCTCTATCCGGGCGTCACCTTCGACGTTCCCATGGGTGCCGACGGTACGGGA ACCGTGATAGCCGCCGGTGAAGGAGTGCGCGATCCGCAACGCTGGATCGGGAAGCGGGTGGTCATCAACCCAGGA GTAGGGTGGAAGGATTCTCCGGATGGACCGGAGGATCCCAAAGGGTACAGAATCCTGGGCGGGACAAAGTCGTAC AACAAGGGGACGATGCAGGAGTATCTCGCCGTCGATGAGGGGGAGCTGGAGGAGGTGCCCGACCATTTGTCGGAT GCAGAGGCAGCGTCATTTCCGCTCACTGGCTTGACGGCGTGGAGAGCGCTGGTGGTCAAGGCTGGAGAGAGGAAC TCGAGCAAGGGAGCTGCAGTCCTGGTGACGGGGATTGGAGGTGGCGTGGCATTGATGGCGCTCAAGCTTGCCGTA GCTAGGGGCGTGGATGTCTATGTGACGAGCTCGAGTGAGGAGAAGATCCGGAAAGCAATTGAGCTGGGGGCTAAG GGAGGTGTGAATTACAAGCAGGAGAAGTGGGAACAGAAATTGTTGGAGTTATTGCCTACAGGGAAAGTGGCTTTC GATGCGATTATTGACGGGGCTGGAGGAGATTCGGTGGATAAGGCCGTCAAGTTGCTTAAGCCTGGTGGTGCTCTT TGTGTGTATGGCATGACGGTCGCACCGCAGATGCCGTTCTCCATGAAGGCTGTTCTGAAGAATATTGATGTCCGG GGCTGTACGATGGGCTCGCGCAAGGAGTTCAGGGAGATGGTCGAGTTCATCAGGGCGCACAAGATCCATCCAGTC ATCTCGCGGGTTCTGCAGACTGATCTGGAGGACATTCCTGCGATCGATGAGATTTTCCAGGATATGAAGGACGGG AAGCAATTCGGGAAGCTGGTGATTGAGTTCGGCAAGACCTCTGGAAGCAAGCTGTGA |
Transcript | >Ani_SJS72_1|g2109.t1 ATGTCAAAAGCCATCTTCCTCAACCCCATTGATGGTAAACCCGGCAAGCCGGGTCAAGTCTACTACCCCCTCGCT GTGAAGACCCTTCCCCAGCCTGTACCTCAAGGCAGCGAGGTTTTAGTAAAGCTCACAGCTACATCACTAAACCAT CGCGATGTGTTCCTTCGCCAACACCTCTATCCGGGCGTCACCTTCGACGTTCCCATGGGTGCCGACGGTACGGGA ACCGTGATAGCCGCCGGTGAAGGAGTGCGCGATCCGCAACGCTGGATCGGGAAGCGGGTGGTCATCAACCCAGGA GTAGGGTGGAAGGATTCTCCGGATGGACCGGAGGATCCCAAAGGGTACAGAATCCTGGGCGGGACAAAGTCGTAC AACAAGGGGACGATGCAGGAGTATCTCGCCGTCGATGAGGGGGAGCTGGAGGAGGTGCCCGACCATTTGTCGGAT GCAGAGGCAGCGTCATTTCCGCTCACTGGCTTGACGGCGTGGAGAGCGCTGGTGGTCAAGGCTGGAGAGAGGAAC TCGAGCAAGGGAGCTGCAGTCCTGGTGACGGGGATTGGAGGTGGCGTGGCATTGATGGCGCTCAAGCTTGCCGTA GCTAGGGGCGTGGATGTCTATGTGACGAGCTCGAGTGAGGAGAAGATCCGGAAAGCAATTGAGCTGGGGGCTAAG GGAGGTGTGAATTACAAGCAGGAGAAGTGGGAACAGAAATTGTTGGAGTTATTGCCTACAGGGAAAGTGGCTTTC GATGCGATTATTGACGGGGCTGGAGGAGATTCGGTGGATAAGGCCGTCAAGTTGCTTAAGCCTGGTGGTGCTCTT TGTGTGTATGGCATGACGGTCGCACCGCAGATGCCGTTCTCCATGAAGGCTGTTCTGAAGAATATTGATGTCCGG GGCTGTACGATGGGCTCGCGCAAGGAGTTCAGGGAGATGGTCGAGTTCATCAGGGCGCACAAGATCCATCCAGTC ATCTCGCGGGTTCTGCAGACTGATCTGGAGGACATTCCTGCGATCGATGAGATTTTCCAGGATATGAAGGACGGG AAGCAATTCGGGAAGCTGGTGATTGAGTTCGGCAAGACCTCTGGAAGCAAGCTGTGA |
Gene | >Ani_SJS72_1|g2109.t1 ATGTCAAAAGCCATCTTCCTCAACCCCATTGATGGTAAACCCGGCAAGCCGGGTCAAGTCTACTACCCCCTCGCT GTGAAGACCCTTCCCCAGCCTGTACCTCAAGGCAGCGAGGTTTTAGTAAAGCTCACAGCTACATCACTAAACCAT CGCGATGTGTTCCTTCGCCAACACCTCTATCCGGGCGTCACCTTCGACGTTCCCATGGGTGCCGACGGTACGGGA ACCGTGATAGCCGCCGGTGAAGGAGTGCGCGATCCGCAACGCTGGATCGGGAAGCGGGTGGTCATCAACCCAGGA GTAGGGTGGAAGGATTCTCCGGATGGACCGGAGGATCCCAAAGGGTACAGAATCCTGGGCGGGACAAAGTCGTAC AACAAGGGGACGATGCAGGAGTATCTCGCCGTCGATGAGGGGGAGCTGGAGGAGGTGCCCGACCATTTGTCGGAT GCAGAGGCAGCGTCATTTCCGCTCACTGGCTTGACGGCGTGGAGAGCGCTGGTGGTCAAGGCTGGAGAGAGGAAC TCGAGCAAGGGAGCTGCAGTCCTGGTGACGGGGATTGGAGGTGGCGTGGCATTGATGGCGCTCAAGCTTGCCGTA GCTAGGGGCGTGGATGTCTATGTGACGAGCTCGAGTGAGGAGAAGATCCGGAAAGCAATTGAGCTGGGGGCTAAG GGAGGTGTGAATTACAAGCAGGAGAAGTGGGAACAGAAATTGTTGGAGTTATTGCCTACAGGGAAAGTGGCTTTC GATGCGATTATTGACGGGGCTGGAGGAGATTCGGTGGATAAGGCCGTCAAGTTGCTTAAGGTGAGCAAACTTTCC CCTCTTTTGCTATATGAGTAGTGTGGATGATCTAACTGGAATAGCCTGGTGGTGCTCTTTGTGTGTATGGCATGA CGGTCGCACCGCAGATGCCGTTCTCCATGAAGGCTGTTCTGAAGAATATTGATGTCCGGGGCTGTACGATGGGCT CGCGCAAGGAGTTCAGGGAGATGGTCGAGTTCATCAGGGCGCACAAGATCCATCCAGTCATCTCGCGGGTTCTGC AGACTGATCTGGAGGACATTCCTGCGATCGATGAGATTTTCCAGGATATGAAGGACGGGAAGCAATTCGGGAAGC TGGTGATTGAGTTCGGCAAGACCTCTGGAAGCAAGCTGTGA |