© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2064.t1 |
| Gene name | |
| Location | scaffold_010:80506..81823 |
| Strand | - |
| Gene length (bp) | 1317 |
| Transcript length (bp) | 1197 |
| Coding sequence length (bp) | 1197 |
| Protein length (aa) | 399 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03839 | Sec62 | Translocation protein Sec62 | 1.5E-68 | 156 | 344 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015031 | protein transport | Yes |
| GO:0030176 | integral component of endoplasmic reticulum membrane | Yes |
| GO:0071705 | nitrogen compound transport | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0031227 | intrinsic component of endoplasmic reticulum membrane | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0033036 | macromolecule localization | No |
| GO:0008104 | protein localization | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0051641 | cellular localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0071702 | organic substance transport | No |
| GO:0006810 | transport | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0016021 | integral component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 259 | 281 | 22 |
| 2 | 294 | 316 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2064.t1 MAAPGQPSPQQIAAMQQQFAAEAARRGLTPEEFAKQQREQLTAEAAKHGMTTEQYVTQLRMRALAAHQRQVEAQR QAAQAQAQGQPQGQGQAPPQSPAQPGQNLPAPPQPQPQQVTRQVPVNPNNPPDPKALAVAAFLRSQNLKTRTCIM DGQRKEMFKVKRAIRAIESPAYAKAAAKKNSLLPPVTDRASAENVFKLLPLSLLALRVTKVDPHAGHNHGKSKNR VKGLWTVRIEQHQETDPMMHYVWLWEGPQWKQKVMAAAVVAGIFAVVLFPLWPMMLRQGVWYLSVGMMGLLGLFF AMSIFRLILFCITVIAVPPGLWLFPNLFEDVGFVDSFKPLWGWQETKKKKTKKSKNVGGEEPQAATAPSATTTAT AAPDTSGTVKRDLAARVEEVTEE* |
| Coding | >Ani_SJS72_1|g2064.t1 ATGGCGGCGCCCGGCCAGCCGTCCCCTCAGCAGATTGCGGCCATGCAACAGCAGTTCGCCGCCGAAGCTGCTAGG CGCGGACTGACCCCCGAGGAATTTGCCAAACAGCAGCGCGAACAGCTCACTGCAGAGGCAGCCAAGCACGGAATG ACCACCGAACAATATGTCACTCAGCTGAGAATGCGAGCTCTTGCCGCTCACCAGAGACAAGTCGAGGCTCAACGA CAAGCTGCTCAAGCCCAAGCGCAGGGCCAGCCACAAGGGCAAGGGCAAGCACCTCCTCAATCGCCCGCCCAACCA GGACAGAACCTGCCAGCACCCCCACAACCTCAACCCCAGCAGGTGACCCGTCAGGTCCCCGTGAACCCTAACAAC CCTCCTGATCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGCGATCGCAGAACCTGAAGACACGGACGTGTATCATG GACGGGCAGCGGAAGGAGATGTTCAAAGTGAAACGTGCCATTCGCGCCATCGAGTCCCCAGCTTACGCCAAGGCG GCTGCCAAAAAGAACTCTCTTCTTCCTCCAGTCACCGATCGCGCCTCGGCAGAGAACGTCTTTAAGCTCCTTCCC CTATCACTTCTTGCTCTGCGGGTGACCAAAGTCGACCCCCATGCAGGCCACAACCATGGCAAGTCCAAGAACCGT GTCAAGGGACTGTGGACGGTACGCATCGAGCAGCACCAAGAAACCGATCCTATGATGCACTATGTCTGGCTGTGG GAAGGTCCGCAGTGGAAGCAGAAGGTTATGGCCGCAGCTGTAGTAGCAGGTATCTTTGCGGTGGTGCTCTTCCCC CTGTGGCCGATGATGCTGCGTCAGGGTGTCTGGTACCTGAGTGTGGGCATGATGGGTCTGCTGGGATTGTTCTTC GCCATGTCCATTTTCCGTCTTATTCTGTTCTGCATCACAGTCATTGCGGTTCCCCCTGGTCTATGGCTGTTCCCC AACCTGTTCGAAGATGTTGGGTTCGTGGATAGTTTCAAGCCCCTGTGGGGTTGGCAAGAGACCAAGAAGAAAAAG ACCAAGAAGTCCAAGAACGTAGGAGGCGAGGAACCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACAGCAACA GCAGCCCCGGATACTTCAGGCACCGTAAAGCGAGACCTTGCGGCGCGCGTGGAGGAAGTCACCGAAGAGTAA |
| Transcript | >Ani_SJS72_1|g2064.t1 ATGGCGGCGCCCGGCCAGCCGTCCCCTCAGCAGATTGCGGCCATGCAACAGCAGTTCGCCGCCGAAGCTGCTAGG CGCGGACTGACCCCCGAGGAATTTGCCAAACAGCAGCGCGAACAGCTCACTGCAGAGGCAGCCAAGCACGGAATG ACCACCGAACAATATGTCACTCAGCTGAGAATGCGAGCTCTTGCCGCTCACCAGAGACAAGTCGAGGCTCAACGA CAAGCTGCTCAAGCCCAAGCGCAGGGCCAGCCACAAGGGCAAGGGCAAGCACCTCCTCAATCGCCCGCCCAACCA GGACAGAACCTGCCAGCACCCCCACAACCTCAACCCCAGCAGGTGACCCGTCAGGTCCCCGTGAACCCTAACAAC CCTCCTGATCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGCGATCGCAGAACCTGAAGACACGGACGTGTATCATG GACGGGCAGCGGAAGGAGATGTTCAAAGTGAAACGTGCCATTCGCGCCATCGAGTCCCCAGCTTACGCCAAGGCG GCTGCCAAAAAGAACTCTCTTCTTCCTCCAGTCACCGATCGCGCCTCGGCAGAGAACGTCTTTAAGCTCCTTCCC CTATCACTTCTTGCTCTGCGGGTGACCAAAGTCGACCCCCATGCAGGCCACAACCATGGCAAGTCCAAGAACCGT GTCAAGGGACTGTGGACGGTACGCATCGAGCAGCACCAAGAAACCGATCCTATGATGCACTATGTCTGGCTGTGG GAAGGTCCGCAGTGGAAGCAGAAGGTTATGGCCGCAGCTGTAGTAGCAGGTATCTTTGCGGTGGTGCTCTTCCCC CTGTGGCCGATGATGCTGCGTCAGGGTGTCTGGTACCTGAGTGTGGGCATGATGGGTCTGCTGGGATTGTTCTTC GCCATGTCCATTTTCCGTCTTATTCTGTTCTGCATCACAGTCATTGCGGTTCCCCCTGGTCTATGGCTGTTCCCC AACCTGTTCGAAGATGTTGGGTTCGTGGATAGTTTCAAGCCCCTGTGGGGTTGGCAAGAGACCAAGAAGAAAAAG ACCAAGAAGTCCAAGAACGTAGGAGGCGAGGAACCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACAGCAACA GCAGCCCCGGATACTTCAGGCACCGTAAAGCGAGACCTTGCGGCGCGCGTGGAGGAAGTCACCGAAGAGTAA |
| Gene | >Ani_SJS72_1|g2064.t1 ATGGCGGCGCCCGGCCAGCCGTCCCCTCAGCAGATTGCGGCCATGCAACAGCAGTTCGCCGCCGAAGCTGCTAGG CGCGGACTGACCCCCGAGGAATTTGCCAAACAGCAGCGCGAACAGCTCACTGCAGAGGCAGCCAAGCACGGAATG ACCACCGAACAATATGTCACTCAGCTGAGAATGCGAGCTCTTGCCGCTCACCAGAGACAAGTCGAGGCTCAACGA CAAGCTGCTCAAGCCCAAGCGCAGGGCCAGCCACAAGGGCAAGGGCAAGCACCTCCTCAATCGCCCGCCCAACCA GGACAGAACCTGCCAGCACCCCCACAACCTCAACCCCAGCAGGTGACCCGTCAGGTCCCCGTGAACCCTAACAAC CCTCCTGATCCGAAGGCGCTCGCCGTTGCCGCGTTCCTGCGATCGCAGAACCTGAAGACACGGACGTGTATCATG GACGGGCAGCGGAAGGAGATGTTCAAAGGTATACCATTATACCACTCTTCGTGAATTCCGTGTGTATGGAAGATA CTCATAAGTTACAGTGAAACGTGCCATTCGCGCCATCGAGTCCCCAGCTTACGCCAAGGCGGCTGCCAAAAAGAA CTCTCTTCTTCCTCCAGTCACCGATCGCGCCTCGGCAGAGAACGTCTTTAAGCTCCTTCCCCTATCACTTCTTGC TCTGCGGGTGACCAAAGTCGACCCCCATGCAGGCCACAACCATGGCAAGTCCAAGAACCGTGTCAAGGGACTGTG GACGGTACGCATCGAGCAGCACCAAGAAACCGATCCTATGATGCACTATGTCTGGCTGTGGGAAGGTCCGCAGTG GAAGCAGAAGGTTATGGCCGCAGCTGTAGTAGCAGGTATCTTTGCGGTGGTGCTCTTCCCCCTGTGGCCGATGAT GCTGCGTCAGGGTGTCTGGTACCTGAGTGTGGGCATGATGGGTCTGCTGGGATTGTTCTTCGCCATGTCCATTTT CCGTCTTATTCTGTTCTGCATCACAGTCATTGCGGTTCCCCCTGGTCTATGGCTGTTCCCCAACCTGTTCGAAGA TGTTGGGTTCGTGGATAGTTTCAAGCCCCTGTGGGGTTGGCAAGAGGTAAGCCATCTACCACGATTATCGCAGAA GGAATGACAATCTCTAACCTCTATATCCAGACCAAGAAGAAAAAGACCAAGAAGTCCAAGAACGTAGGAGGCGAG GAACCCCAAGCCGCAACCGCTCCGTCCGCCACCACAACAGCAACAGCAGCCCCGGATACTTCAGGCACCGTAAAG CGAGACCTTGCGGCGCGCGTGGAGGAAGTCACCGAAGAGTAA |