Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g1975.t1
Gene name
Location	scaffold_009:335888..336617
Strand	-
Gene length (bp)	729
Transcript length (bp)	663
Coding sequence length (bp)	663
Protein length (aa)	221

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09801	SYS1	Integral membrane protein S linking to the trans Golgi network	2.3E-53	13	154

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 14	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22
2	67	89	22
3	96	115	19
4	125	144	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g1975.t1 MPPRRRAPRAGSRTDLPPLKIVRKILLLQVAYYVTATALILFTTVVYGTPFSLDLVFSWNALRGDTTIGWMLGLV WLLTSGIGVIFLLLLVARSKLIPDFALTLHFLHLIATTLYTHSVPANWLWWGLQGASAAFMTFLGIWACRWRELQ PISFGGIGGGSSSGGGISAGASGGGEAQSGAGGEESFSLSRGRGRGRGLRDSSSGGDEYEMVEMKGDAAV*
Coding	>Ani_SJS72_1\|g1975.t1 ATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAGATC CTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCTTTACAACGGTCGTCTACGGCACGCCC TTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCTTGGCTTGGTG TGGTTGTTGACTAGTGGGATTGGGGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTTC GCCCTAACCCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGCATTCCGTGCCCGCGAATTGGCTCTGG TGGGGCCTGCAGGGTGCGAGTGCCGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCAG CCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTATATCTGCTGGAGCTTCAGGCGGTGGT GAGGCGCAAAGCGGTGCTGGCGGTGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCGC GATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTGACGCGGCAGTATAG
Transcript	>Ani_SJS72_1\|g1975.t1 ATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAGATC CTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCTTTACAACGGTCGTCTACGGCACGCCC TTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCTTGGCTTGGTG TGGTTGTTGACTAGTGGGATTGGGGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTTC GCCCTAACCCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGCATTCCGTGCCCGCGAATTGGCTCTGG TGGGGCCTGCAGGGTGCGAGTGCCGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCAG CCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTATATCTGCTGGAGCTTCAGGCGGTGGT GAGGCGCAAAGCGGTGCTGGCGGTGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCGC GATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTGACGCGGCAGTATAG
Gene	>Ani_SJS72_1\|g1975.t1 ATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAGATC CTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCTTTACAACGGTCGTCTACGGCACGCCC TTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCTTGGCTTGGTG TGGTTGTTGACTAGTGGGATTGGGTAAGTTCTTTAGCTTCCATTTTCACGGCCCAAGGCACAAGTTCTAACAAGA AGTCTACATTAAAGGGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTTCGCCCTAACC CTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGCATTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTG CAGGGTGCGAGTGCCGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCAGCCTATCAGT TTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTATATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAA AGCGGTGCTGGCGGTGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCGCGATAGTAGC AGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTGACGCGGCAGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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