Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g1964.t1
Gene name
Location	scaffold_009:305796..306675
Strand	+
Gene length (bp)	879
Transcript length (bp)	624
Coding sequence length (bp)	624
Protein length (aa)	208

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04387	PTPLA	Protein tyrosine phosphatase-like protein, PTPLA	2.3E-50	50	197

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	112	134	22
3	136	155	19
4	165	187	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g1964.t1 MSSLRTTYLVTYNSINALLWLYIFSSIVVSPFQSPQTTYSTLEPWTRWTQTIAILEILHASLGLTRSPIFTTFTQ IFARSVQVWAINYAYPETTSPSPAYKYMLLAWSFADAIRYSYFAVLSAGAPVPSLLRWLRYSLFLILYPVGIGSE WWLMFQALRVTNSIPVQALFIFFLFLYGPGSPMMYSYMVKQRKKTLAGGKKERKENK*
Coding	>Ani_SJS72_1\|g1964.t1 ATGTCCTCTCTAAGAACAACCTACTTAGTAACATACAACAGCATCAACGCCCTTCTCTGGCTATACATATTCTCC TCTATCGTCGTCTCCCCTTTCCAATCCCCCCAAACAACCTACTCTACCCTCGAACCCTGGACAAGATGGACCCAA ACTATCGCTATTCTTGAGATCCTTCATGCGAGTCTAGGCCTCACCCGCTCGCCCATCTTCACAACATTCACCCAA ATCTTCGCCCGCAGCGTCCAAGTCTGGGCCATCAATTACGCCTACCCGGAGACCACCAGTCCCTCCCCAGCATAC AAGTACATGCTGCTTGCATGGTCATTCGCAGATGCAATCCGGTATTCTTATTTCGCAGTCTTGAGTGCAGGTGCT CCTGTGCCGAGCTTGTTGAGGTGGTTGAGATACTCCCTCTTCCTAATCCTCTACCCCGTTGGCATCGGAAGCGAA TGGTGGCTCATGTTCCAGGCGCTGCGCGTTACGAACAGCATTCCTGTTCAGGCGCTTTTCATTTTCTTTCTGTTT CTTTACGGACCTGGTTCGCCCATGATGTATTCGTATATGGTTAAGCAGAGGAAGAAGACTTTGGCTGGCGGTAAG AAGGAGAGGAAGGAGAACAAGTAA
Transcript	>Ani_SJS72_1\|g1964.t1 ATGTCCTCTCTAAGAACAACCTACTTAGTAACATACAACAGCATCAACGCCCTTCTCTGGCTATACATATTCTCC TCTATCGTCGTCTCCCCTTTCCAATCCCCCCAAACAACCTACTCTACCCTCGAACCCTGGACAAGATGGACCCAA ACTATCGCTATTCTTGAGATCCTTCATGCGAGTCTAGGCCTCACCCGCTCGCCCATCTTCACAACATTCACCCAA ATCTTCGCCCGCAGCGTCCAAGTCTGGGCCATCAATTACGCCTACCCGGAGACCACCAGTCCCTCCCCAGCATAC AAGTACATGCTGCTTGCATGGTCATTCGCAGATGCAATCCGGTATTCTTATTTCGCAGTCTTGAGTGCAGGTGCT CCTGTGCCGAGCTTGTTGAGGTGGTTGAGATACTCCCTCTTCCTAATCCTCTACCCCGTTGGCATCGGAAGCGAA TGGTGGCTCATGTTCCAGGCGCTGCGCGTTACGAACAGCATTCCTGTTCAGGCGCTTTTCATTTTCTTTCTGTTT CTTTACGGACCTGGTTCGCCCATGATGTATTCGTATATGGTTAAGCAGAGGAAGAAGACTTTGGCTGGCGGTAAG AAGGAGAGGAAGGAGAACAAGTAA
Gene	>Ani_SJS72_1\|g1964.t1 ATGTCCTCTCTAAGAACAACCTACTTAGTAACATACAACAGCATCAACGCCCTTCTCTGGCTATACATATTCTCC TCTATCGTCGTCTCCCCTTTCCAATCCCCCCAAACAACCTACTCTACCCTCGAACCCTGGACAAGATGGACCCAA ACTATCGCTATTCTTGAGATCCTTCATGCGAGTCTAGGCAAGTCAAGCCCCATCCCCCGATACCTAAATCCCTGC AGTATCCCAGTTCCACCCCCAACACCAACAAACACGAATTACTGACCGAGAAAAGGCCTCACCCGCTCGCCCATC TTCACAACATTCACCCAAATCTTCGCCCGCAGCGTCCAAGTCTGGGCCATCAATTACGCCTACCCGGAGACCACC AGTCCCTCCCCAGCATACAAGTACATGCTGCTTGCATGGTCATTCGCAGATGCAATCCGGTATTCTTATTTCGCA GTCTTGAGTGCAGGTGCTCCTGTGCCGAGCTTGTTGAGGTGGTTGAGGTATGTACCGTCTCTATCGCTATTTATT CTTCCTTCATTCGTATAGACAAGAGTTTGAATTAATTCCCTCTAGATACTCCCTCTTCCTAATCCTCTACCCCGT TGGCATCGGAAGCGAATGGTGGCTCATGTTCCAGGCGCTGCGCGTTACGAACAGCATTCCTGTTCAGGCGCTTTT CATTTTCTTTCTGTTTCTTTACGGACCTGGTGAGTTTTTTTTCCCCCTTACTCCTATTGACATTGGTGTGTAGAT GGTATGGAGTTGTGGTTTTTTAATGCGTGTGTTTGTGTTCTAGGTTCGCCCATGATGTATTCGTATATGGTTAAG CAGAGGAAGAAGACTTTGGCTGGCGGTAAGAAGGAGAGGAAGGAGAACAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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