© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1924.t1 |
| Gene name | |
| Location | scaffold_009:176037..177243 |
| Strand | + |
| Gene length (bp) | 1206 |
| Transcript length (bp) | 840 |
| Coding sequence length (bp) | 840 |
| Protein length (aa) | 280 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01554 | MatE | MatE | 8.8E-07 | 122 | 208 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0042910 | xenobiotic transmembrane transporter activity | Yes |
| GO:0015297 | antiporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 118 | 140 | 22 |
| 3 | 222 | 244 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1924.t1 MTGYAKKRPVTKSDLKLAGRSEVNHQEVLSLNCAFGERWWYRSNYMGALLFSSATFILPAIYGTLVKIWMANIDA SLVVTIDVYTHIGTVAEVINEGLPRAVWSTIADKGARSLGARLGLAHSLLVFQTLMGVLLSIMFVCAAREFLSKF VPHDVAEASITYVHISSFSALSSAVEVAASSATRTLGKPDVPLVINTVKVAVNILLDLLLTSKFHAGGWQPTVIM QAGICDMVAACSGLPYFIITTSRRENAKAPSTGGFLAPFKPGSVTFIDSADEEL* |
| Coding | >Ani_SJS72_1|g1924.t1 ATGACTGGGTACGCCAAAAAGAGACCGGTCACAAAGTCCGATCTCAAGTTGGCAGGCAGATCCGAAGTGAATCAC CAGGAGGTCCTATCACTAAATTGCGCTTTCGGCGAGCGATGGTGGTACCGTTCGAATTACATGGGCGCTCTCCTC TTCAGCTCCGCCACTTTCATCCTTCCAGCCATCTACGGCACGCTTGTCAAGATCTGGATGGCGAATATTGATGCC TCTCTCGTCGTCACGATTGATGTCTACACGCATATCGGCACTGTTGCAGAAGTCATCAATGAAGGCCTGCCGCGC GCAGTATGGTCTACAATTGCCGACAAGGGAGCACGATCCCTTGGGGCTCGCTTAGGACTTGCACACTCACTATTG GTGTTCCAAACTTTAATGGGGGTATTACTGAGCATCATGTTCGTGTGTGCTGCTCGAGAGTTTTTATCTAAATTC GTTCCACATGACGTCGCAGAAGCAAGTATAACGTACGTCCATATCAGCTCCTTTTCTGCTCTGAGTTCTGCGGTT GAGGTGGCCGCTTCCAGCGCGACGCGCACTCTGGGTAAACCAGACGTTCCACTTGTGATCAACACTGTTAAAGTA GCGGTGAACATTCTCCTTGACCTTCTACTAACCTCTAAGTTCCATGCCGGTGGATGGCAGCCGACAGTCATCATG CAAGCTGGAATTTGTGATATGGTCGCGGCTTGTTCTGGTCTTCCATACTTCATCATAACTACAAGTCGCAGGGAA AATGCCAAGGCACCATCCACCGGTGGTTTTCTCGCCCCGTTCAAACCAGGGTCTGTCACATTCATTGATTCTGCA GATGAAGAGCTATAA |
| Transcript | >Ani_SJS72_1|g1924.t1 ATGACTGGGTACGCCAAAAAGAGACCGGTCACAAAGTCCGATCTCAAGTTGGCAGGCAGATCCGAAGTGAATCAC CAGGAGGTCCTATCACTAAATTGCGCTTTCGGCGAGCGATGGTGGTACCGTTCGAATTACATGGGCGCTCTCCTC TTCAGCTCCGCCACTTTCATCCTTCCAGCCATCTACGGCACGCTTGTCAAGATCTGGATGGCGAATATTGATGCC TCTCTCGTCGTCACGATTGATGTCTACACGCATATCGGCACTGTTGCAGAAGTCATCAATGAAGGCCTGCCGCGC GCAGTATGGTCTACAATTGCCGACAAGGGAGCACGATCCCTTGGGGCTCGCTTAGGACTTGCACACTCACTATTG GTGTTCCAAACTTTAATGGGGGTATTACTGAGCATCATGTTCGTGTGTGCTGCTCGAGAGTTTTTATCTAAATTC GTTCCACATGACGTCGCAGAAGCAAGTATAACGTACGTCCATATCAGCTCCTTTTCTGCTCTGAGTTCTGCGGTT GAGGTGGCCGCTTCCAGCGCGACGCGCACTCTGGGTAAACCAGACGTTCCACTTGTGATCAACACTGTTAAAGTA GCGGTGAACATTCTCCTTGACCTTCTACTAACCTCTAAGTTCCATGCCGGTGGATGGCAGCCGACAGTCATCATG CAAGCTGGAATTTGTGATATGGTCGCGGCTTGTTCTGGTCTTCCATACTTCATCATAACTACAAGTCGCAGGGAA AATGCCAAGGCACCATCCACCGGTGGTTTTCTCGCCCCGTTCAAACCAGGGTCTGTCACATTCATTGATTCTGCA GATGAAGAGCTATAA |
| Gene | >Ani_SJS72_1|g1924.t1 ATGACTGGGTACGCCAAAAAGAGACCGGTCACAAAGTCCGATCTCAAGTTGGCAGGCAGATCCGAAGTGAATCAC CAGGAGGTGAGAGATGAGAGGATGGTATCTGCAAAGAATTAATAGCCAGTTACCAAAATGCACGTGACTGGTCCG GGTACTGGCACCTGCTAGTGTGACAATTATTCAGCCTACCCCATCTTCTTTCCCCAATCGTTCGCCTGACGTAAA CTGTATGTCCGCCGATGGCATAAACGCAGACTCCACCTATCCAAAGGGATATACACATTCAGTTCGACCGGATCC TGTCCATTCGGACATTGCATAAGAATCACCCAAGGTCCTATCACTAAATTGCGCTTTCGGCGAGCGATGGTGGTA CCGTTCGAAGTAAGTCCCGTCCCGGAGTGATAACAAACGCTGATTGATTAGTTACATGGGCGCTCTCCTCTTCAG CTCCGCCACTTTCATCCTTCCAGCCATCTACGGCACGCTTGTCAAGATCTGGATGGCGAATATTGATGCCTCTCT CGTCGTCACGATTGATGTCTACACGCATATCGGCACTGTTGCAGAAGTCATCAATGAAGGCCTGCCGCGCGCAGT ATGGTCTACAATTGCCGACAAGGGAGCACGATCCCTTGGGGCTCGCTTAGGACTTGCACACTCACTATTGGTGTT CCAAACTTTAATGGGGGTATTACTGAGCATCATGTTCGTGTGTGCTGCTCGAGAGTTTTTATCTAAATTCGTTCC ACATGACGTCGCAGAAGCAAGTATAACGTACGTCCATATCAGCTCCTTTTCTGCTCTGAGTTCTGCGGTTGAGGT GGCCGCTTCCAGCGCGACGCGCACTCTGGGTAAACCAGACGTTCCACTTGTGATCAACACTGTTAAAGTAGCGGT GAACATTCTCCTTGACCTTCTACTAACCTCTAAGTTCCATGCCGGTGGATGGCAGCCGACAGTCATCATGCAAGC TGGAATTTGTGATATGGTCGCGGCTTGTTCTGGTCTTCCATACTTCATCATAACTACAAGTCGCAGGGAAAATGC CAAGGCACCATCCACCGGTGGTTTTCTCGCCCCGTTCAAACCAGGGTCTGTCACATTCATTGATTCTGCAGTTCG TAACACGCTGTACCTTTGGCTCGTGTCTGGTGTTGTGGCTGATTTGAAGTTACTATTGTTCTCTAGGATGAAGAG CTATAA |