Protein ID | Ani_SJS72_1|g1891.t1 |
Gene name | |
Location | scaffold_009:76669..78488 |
Strand | - |
Gene length (bp) | 1819 |
Transcript length (bp) | 1584 |
Coding sequence length (bp) | 1584 |
Protein length (aa) | 528 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 1.0E-06 | 30 | 65 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 3.4E-15 | 93 | 128 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 1.4E-12 | 148 | 183 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 1.4E-13 | 214 | 249 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 1.2E-10 | 305 | 336 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 3.5E-10 | 350 | 387 |
PF10281 | Ish1 | Putative nuclear envelope organisation protein | 1.0E-11 | 418 | 453 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g1891.t1 MKLHLASYLVFALATFEAVGASSWFSKAVYNKWHETELERWLSDHDIPYPSPADRKDLESLVKSNWEAKVQKPLA HVTQHSHDHWHDAKEWLFDTWSDSQLKAFLDRHGVPAPQPRKRDTLLKTARENYESIATKLGEAVAYPGNWVYEQ WTESDLKEWLDERGWPVPQPTTRDRLIASVRRNARLASLNAKSIAASASASAEAAQATLSDALFKAWSDSDLKKF LDEHGVKVPQGSRRNELVALARKHRASLVSQASEASATISSTATQIIGAATSKAGNEYGKATDVAESKAQDTFDT VIQGWSDSRLKAFLDARGVPVPQSNKRDELLAKVRLHSHKAATGWSAWTFDTWDTEHLKKYLSSMNAKAAHRADI TRDELVKQAQENYAKASKAGGANLASATSYMAQATDAAKGSAFDTWTHSDLKAYLDSYGIPVYQGSGINELRAAA RRNAEYFRYGTSSPSGTIFAKMQEAGQWLLDQLKIGASSGRAQGQEAAEKAKAKGSEAAEKAKAQGSHAASSMRV EL* |
Coding | >Ani_SJS72_1|g1891.t1 ATGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCGCTTGCAACCTTTGAGGCGGTTGGAGCGTCCAGCTGGTTC AGCAAGGCTGTTTACAACAAATGGCATGAGACTGAGTTAGAAAGATGGCTCTCCGATCATGACATCCCGTACCCA TCGCCGGCCGATCGCAAGGATCTCGAGTCCCTAGTGAAGTCCAACTGGGAAGCTAAAGTCCAGAAGCCCCTAGCA CATGTTACACAGCACTCTCATGATCACTGGCATGATGCCAAGGAATGGCTCTTTGACACGTGGTCCGACTCCCAG TTGAAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAGCCTCGCAAGCGTGATACTCTTTTGAAAACTGCT CGCGAAAACTATGAGTCTATTGCCACGAAGCTTGGGGAGGCTGTCGCCTATCCTGGTAACTGGGTATACGAGCAA TGGACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTGGCTGGCCGGTTCCACAGCCCACCACGCGCGACAGG CTTATTGCATCGGTTCGTCGTAATGCTCGACTGGCCAGTTTGAACGCGAAGAGCATCGCTGCCTCTGCCTCTGCC TCTGCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTCAAGGCTTGGTCCGACTCCGATCTGAAGAAGTTC CTCGATGAACACGGTGTCAAGGTACCCCAAGGATCTCGCCGCAATGAACTCGTGGCTCTGGCGAGGAAGCACCGC GCCTCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATTTCGTCCACCGCTACTCAGATCATTGGAGCCGCT ACCTCCAAAGCTGGTAACGAATACGGCAAAGCCACCGATGTTGCCGAGTCCAAGGCCCAAGATACCTTCGATACC GTAATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTCGATGCGCGCGGAGTTCCCGTTCCTCAAAGCAAC AAGCGTGACGAGCTCCTTGCTAAGGTGCGGCTCCACAGCCACAAGGCAGCTACTGGCTGGTCTGCTTGGACCTTT GATACCTGGGACACCGAGCATTTGAAGAAGTACCTGTCCTCCATGAATGCCAAGGCAGCCCACCGCGCCGACATT ACTCGCGACGAGCTTGTCAAGCAAGCCCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGCAAACCTCGCA TCGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCAAGGGTTCCGCCTTCGACACCTGGACCCATTCCGAT CTCAAGGCTTACCTTGACTCGTACGGCATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCGCGCCGCTGCT CGCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTCCTTCGGGAACCATCTTCGCTAAGATGCAAGAGGCC GGCCAGTGGCTTCTGGATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGCCGCTGAGAAG GCCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCCCAGGGATCCCATGCTGCCTCGAGCATGCGGGTC GAGCTGTAA |
Transcript | >Ani_SJS72_1|g1891.t1 ATGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCGCTTGCAACCTTTGAGGCGGTTGGAGCGTCCAGCTGGTTC AGCAAGGCTGTTTACAACAAATGGCATGAGACTGAGTTAGAAAGATGGCTCTCCGATCATGACATCCCGTACCCA TCGCCGGCCGATCGCAAGGATCTCGAGTCCCTAGTGAAGTCCAACTGGGAAGCTAAAGTCCAGAAGCCCCTAGCA CATGTTACACAGCACTCTCATGATCACTGGCATGATGCCAAGGAATGGCTCTTTGACACGTGGTCCGACTCCCAG TTGAAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAGCCTCGCAAGCGTGATACTCTTTTGAAAACTGCT CGCGAAAACTATGAGTCTATTGCCACGAAGCTTGGGGAGGCTGTCGCCTATCCTGGTAACTGGGTATACGAGCAA TGGACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTGGCTGGCCGGTTCCACAGCCCACCACGCGCGACAGG CTTATTGCATCGGTTCGTCGTAATGCTCGACTGGCCAGTTTGAACGCGAAGAGCATCGCTGCCTCTGCCTCTGCC TCTGCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTCAAGGCTTGGTCCGACTCCGATCTGAAGAAGTTC CTCGATGAACACGGTGTCAAGGTACCCCAAGGATCTCGCCGCAATGAACTCGTGGCTCTGGCGAGGAAGCACCGC GCCTCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATTTCGTCCACCGCTACTCAGATCATTGGAGCCGCT ACCTCCAAAGCTGGTAACGAATACGGCAAAGCCACCGATGTTGCCGAGTCCAAGGCCCAAGATACCTTCGATACC GTAATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTCGATGCGCGCGGAGTTCCCGTTCCTCAAAGCAAC AAGCGTGACGAGCTCCTTGCTAAGGTGCGGCTCCACAGCCACAAGGCAGCTACTGGCTGGTCTGCTTGGACCTTT GATACCTGGGACACCGAGCATTTGAAGAAGTACCTGTCCTCCATGAATGCCAAGGCAGCCCACCGCGCCGACATT ACTCGCGACGAGCTTGTCAAGCAAGCCCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGCAAACCTCGCA TCGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCAAGGGTTCCGCCTTCGACACCTGGACCCATTCCGAT CTCAAGGCTTACCTTGACTCGTACGGCATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCGCGCCGCTGCT CGCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTCCTTCGGGAACCATCTTCGCTAAGATGCAAGAGGCC GGCCAGTGGCTTCTGGATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGCCGCTGAGAAG GCCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCCCAGGGATCCCATGCTGCCTCGAGCATGCGGGTC GAGCTGTAA |
Gene | >Ani_SJS72_1|g1891.t1 ATGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCGCTTGCAACCTTTGAGGCGGTTGGAGCGTCCAGCTGGTTC AGCAAGGCTGGTATGTCAACTTCTGTACCATTGACTGATTTGACTGCTCCACATCGAGACACTCGCTAACACCCC TTAGTTTACAACAAATGGCATGAGACTGAGTTAGAAAGATGGCTCTCCGATCATGGTATGCTGCTTCCTCCCATA TATTCTTCCCATGAAGCATAGTTGACAACGTCTTTAGACATCCCGTACCCATCGCCGGCCGATCGCAAGGATCTC GAGTCCCTAGTGAAGTCCAACTGGGAAGCTAAAGTCCAGAAGCCCCTAGCACATGTTACACAGCACTCTCATGAT CACTGGCATGATGCCAAGGAATGGCTCTTTGACACGTAAGTCTATGCGAGATTGTCCTTCCCGTAGTTAGAATGT ACTAATAGTCTACACAGGTGGTCCGACTCCCAGTTGAAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAG CCTCGCAAGCGTGATACTCTTTTGAAAACTGCTCGCGAAAACTATGAGTCTATTGCCACGAAGCTTGGGGAGGCT GTCGCCTATCCTGGTAACTGGGTATACGAGCAATGGACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTGGC TGGCCGGTTCCACAGCCCACCACGCGCGACAGGCTTATTGCATCGGTTCGTCGTAATGCTCGACTGGCCAGTTTG AACGCGAAGAGCATCGCTGCCTCTGCCTCTGCCTCTGCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTC AAGGCTTGGTCCGACTCCGATCTGAAGAAGTTCCTCGATGAACACGGTGTCAAGGTACCCCAAGGATCTCGCCGC AATGAACTCGTGGCTCTGGCGAGGAAGCACCGCGCCTCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATT TCGTCCACCGCTACTCAGATCATTGGAGCCGCTACCTCCAAAGCTGGTAACGAATACGGCAAAGCCACCGATGTT GCCGAGTCCAAGGCCCAAGATACCTTCGATACCGTAATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTC GATGCGCGCGGAGTTCCCGTTCCTCAAAGCAACAAGCGTGACGAGCTCCTTGCTAAGGTGCGGCTCCACAGCCAC AAGGCAGCTACTGGCTGGTCTGCTTGGACCTTTGATACCTGGGACACCGAGCATTTGAAGTAAGACTCCTACTTG GATAACTTTAGACAACATTCTCTAACATATATATAGGAAGTACCTGTCCTCCATGAATGCCAAGGCAGCCCACCG CGCCGACATTACTCGCGACGAGCTTGTCAAGCAAGCCCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGC AAACCTCGCATCGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCAAGGGTTCCGCCTTCGACACCTGGAC CCATTCCGATCTCAAGGCTTACCTTGACTCGTACGGCATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCG CGCCGCTGCTCGCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTCCTTCGGGAACCATCTTCGCTAAGAT GCAAGAGGCCGGCCAGTGGCTTCTGGATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGC CGCTGAGAAGGCCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCCCAGGGATCCCATGCTGCCTCGAG CATGCGGGTCGAGCTGTAA |