© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g1852.t1 |
| Gene name | |
| Location | scaffold_008:510490..512357 |
| Strand | + |
| Gene length (bp) | 1867 |
| Transcript length (bp) | 1590 |
| Coding sequence length (bp) | 1590 |
| Protein length (aa) | 530 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 3.1E-21 | 88 | 451 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 92 | 111 | 19 |
| 2 | 126 | 148 | 22 |
| 3 | 169 | 191 | 22 |
| 4 | 201 | 223 | 22 |
| 5 | 230 | 248 | 18 |
| 6 | 268 | 290 | 22 |
| 7 | 302 | 324 | 22 |
| 8 | 358 | 380 | 22 |
| 9 | 392 | 414 | 22 |
| 10 | 419 | 438 | 19 |
| 11 | 466 | 488 | 22 |
| 12 | 503 | 522 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1852.t1 MSSPQTVPTLGSPYEKEISRIRSTEDTSPPTENAEKRAQRQPGGPFASSRMAAYLRRFEQQLVEYNLEARGIERV QEHERMSKLTWVSYMQAFLLWVSINLAANNITLGMLGPATYGLSFLDSALCGVFGALVGAIVSSWMATWGPISGI RTMAFGRYSMGWWPSKLIVILNLIQMLGYGLIDCVVGGQILSAVSPHGHMTVAVGIVIIAIISWVIATFGIQIFH YYERFAFLPQLIVVCILFGMSGTKYDLSTPSTGDARTVAGNRLSFFSLCLSAAITYAPLAADFFVYYPQNTSRTS LFFLSLGGLMTSFTMAFLVGIGLASGITSDPAYSKAFADGAGALIVEGFSPLNGFGKFCAVVVALGLIANTIPPT YSAGVDFQILGRYAEKVPRAIWNAIGVIIYTVCALAGRSNLSDIFTNFLALMGYWVAIWIAIILEDRFIFRARSG YNWHSWNDPSKLPLGISAFIAFLIGWAGAILCMAQVWYIGPLARLVGEYGADMGTYVAFSWTCVVYPPLRYVELR YFGR* |
| Coding | >Ani_SJS72_1|g1852.t1 ATGTCTTCGCCGCAAACTGTCCCCACCCTAGGGTCTCCCTATGAGAAGGAAATCTCAAGGATCCGTTCGACAGAA GATACTTCTCCTCCCACCGAAAATGCCGAGAAAAGAGCCCAGAGGCAGCCCGGTGGGCCGTTTGCCTCTTCGAGA ATGGCTGCATATCTTAGACGATTCGAACAGCAGCTCGTCGAATATAATCTGGAAGCCCGTGGCATAGAGCGGGTG CAAGAGCATGAACGGATGTCCAAGTTGACTTGGGTTTCTTACATGCAGGCTTTCTTGCTTTGGGTCTCGATCAAC TTGGCGGCCAACAACATCACACTGGGTATGCTGGGACCTGCTACATACGGACTGAGCTTCCTTGACTCGGCTCTA TGCGGAGTGTTCGGTGCTTTAGTCGGTGCCATAGTTTCTTCGTGGATGGCCACATGGGGCCCTATATCCGGTATT CGGACTATGGCATTCGGACGCTATTCAATGGGATGGTGGCCCAGCAAACTCATCGTCATCTTGAACCTGATCCAA ATGCTGGGATATGGCTTGATCGACTGCGTGGTTGGCGGGCAGATCTTGTCCGCCGTTTCACCACATGGACACATG ACGGTTGCTGTGGGCATCGTGATCATCGCCATCATCAGTTGGGTCATAGCCACTTTCGGCATTCAAATCTTCCAT TACTACGAGCGATTTGCCTTTCTCCCCCAGCTTATCGTTGTTTGCATACTGTTCGGTATGTCGGGGACGAAATAT GACTTGTCCACACCATCCACTGGCGACGCTCGCACAGTAGCCGGAAACCGTCTGTCCTTCTTCTCGCTTTGTCTC AGTGCCGCAATTACATATGCACCTCTTGCGGCAGACTTCTTCGTCTATTATCCTCAGAATACCTCGAGGACATCT CTCTTTTTCCTCTCCTTGGGCGGCCTAATGACCTCTTTCACCATGGCATTCCTCGTCGGCATCGGTCTCGCATCG GGCATCACCTCGGACCCAGCGTACAGCAAAGCATTCGCCGACGGTGCCGGAGCACTTATCGTCGAAGGGTTCAGC CCTCTTAATGGATTTGGCAAGTTTTGCGCCGTAGTCGTTGCACTCGGTCTTATCGCCAACACCATCCCACCCACG TACTCGGCTGGCGTAGATTTCCAGATCCTCGGAAGATACGCCGAAAAGGTGCCCAGAGCCATTTGGAACGCCATC GGAGTGATCATCTACACTGTGTGCGCCCTAGCGGGCCGAAGCAATCTTTCCGACATCTTCACCAACTTCCTCGCG CTCATGGGCTACTGGGTCGCCATCTGGATAGCCATTATCCTAGAAGACCGCTTTATCTTCCGCGCCCGCAGCGGA TACAACTGGCATTCCTGGAACGACCCGTCGAAGCTGCCCTTGGGCATTTCCGCTTTCATTGCCTTCTTGATCGGT TGGGCAGGCGCGATCCTATGCATGGCGCAGGTGTGGTATATCGGGCCTTTGGCACGATTGGTGGGTGAATATGGC GCCGATATGGGCACCTACGTTGCTTTTTCATGGACGTGTGTGGTCTATCCGCCTCTCCGATATGTCGAACTCCGC TACTTTGGACGGTGA |
| Transcript | >Ani_SJS72_1|g1852.t1 ATGTCTTCGCCGCAAACTGTCCCCACCCTAGGGTCTCCCTATGAGAAGGAAATCTCAAGGATCCGTTCGACAGAA GATACTTCTCCTCCCACCGAAAATGCCGAGAAAAGAGCCCAGAGGCAGCCCGGTGGGCCGTTTGCCTCTTCGAGA ATGGCTGCATATCTTAGACGATTCGAACAGCAGCTCGTCGAATATAATCTGGAAGCCCGTGGCATAGAGCGGGTG CAAGAGCATGAACGGATGTCCAAGTTGACTTGGGTTTCTTACATGCAGGCTTTCTTGCTTTGGGTCTCGATCAAC TTGGCGGCCAACAACATCACACTGGGTATGCTGGGACCTGCTACATACGGACTGAGCTTCCTTGACTCGGCTCTA TGCGGAGTGTTCGGTGCTTTAGTCGGTGCCATAGTTTCTTCGTGGATGGCCACATGGGGCCCTATATCCGGTATT CGGACTATGGCATTCGGACGCTATTCAATGGGATGGTGGCCCAGCAAACTCATCGTCATCTTGAACCTGATCCAA ATGCTGGGATATGGCTTGATCGACTGCGTGGTTGGCGGGCAGATCTTGTCCGCCGTTTCACCACATGGACACATG ACGGTTGCTGTGGGCATCGTGATCATCGCCATCATCAGTTGGGTCATAGCCACTTTCGGCATTCAAATCTTCCAT TACTACGAGCGATTTGCCTTTCTCCCCCAGCTTATCGTTGTTTGCATACTGTTCGGTATGTCGGGGACGAAATAT GACTTGTCCACACCATCCACTGGCGACGCTCGCACAGTAGCCGGAAACCGTCTGTCCTTCTTCTCGCTTTGTCTC AGTGCCGCAATTACATATGCACCTCTTGCGGCAGACTTCTTCGTCTATTATCCTCAGAATACCTCGAGGACATCT CTCTTTTTCCTCTCCTTGGGCGGCCTAATGACCTCTTTCACCATGGCATTCCTCGTCGGCATCGGTCTCGCATCG GGCATCACCTCGGACCCAGCGTACAGCAAAGCATTCGCCGACGGTGCCGGAGCACTTATCGTCGAAGGGTTCAGC CCTCTTAATGGATTTGGCAAGTTTTGCGCCGTAGTCGTTGCACTCGGTCTTATCGCCAACACCATCCCACCCACG TACTCGGCTGGCGTAGATTTCCAGATCCTCGGAAGATACGCCGAAAAGGTGCCCAGAGCCATTTGGAACGCCATC GGAGTGATCATCTACACTGTGTGCGCCCTAGCGGGCCGAAGCAATCTTTCCGACATCTTCACCAACTTCCTCGCG CTCATGGGCTACTGGGTCGCCATCTGGATAGCCATTATCCTAGAAGACCGCTTTATCTTCCGCGCCCGCAGCGGA TACAACTGGCATTCCTGGAACGACCCGTCGAAGCTGCCCTTGGGCATTTCCGCTTTCATTGCCTTCTTGATCGGT TGGGCAGGCGCGATCCTATGCATGGCGCAGGTGTGGTATATCGGGCCTTTGGCACGATTGGTGGGTGAATATGGC GCCGATATGGGCACCTACGTTGCTTTTTCATGGACGTGTGTGGTCTATCCGCCTCTCCGATATGTCGAACTCCGC TACTTTGGACGGTGA |
| Gene | >Ani_SJS72_1|g1852.t1 ATGTCTTCGCCGCAAACTGTCCCCACCCTAGGGTCTCCCTATGAGAAGGAAATCTCAAGGATCCGTTCGACAGAA GATACTTCTCCTCCCACCGAAAATGCCGAGAAAAGAGCCCAGAGGCAGCCCGGTGGGCCGTTTGCCTCTTCGAGA ATGGCTGCATATCTTAGACGATTCGAACAGCAGCTCGTCGAATATAATCTGGAAGCCCGTGGCATAGAGCGGGTG CAAGAGCATGAACGGATGTCCAAGTTGACTTGGGTTTCTTACATGCAGGCTTTCTTGCTTTGGGTCTCGATCAAC TTGGCGGCCAACAACATCACACTGGGTATGCTGGGACCTGCTACATACGGACTGAGCTTCCTTGACTCGGCTCTA TGCGGAGTGTTCGGTGCTTTAGTCGGTGCCATAGTTTCTTCGTGGATGGCCACATGGGGCCCTATATCCGGTATT CGGACTATGGTATGCTATCACACTTCCCTTAGAAAAAGCTGGCTGAGTACTAATATTCTCAGGCATTCGGACGCT ATTCAATGGGATGGTGGCCCAGCAAACTCATCGTCATCTTGAACCTGATCCAAATGCTGGGATATGGCTTGATCG ACTGCGTGGTTGGCGGGCAGATCTTGTCCGCCGTTTCACCACATGGACACATGACGGTTGCTGTGGGTAAGTTGG TAGTGTTTCGAGCTGGTATTGTACGGTTATTGATGAAGAGAAGGCATCGTGATCATCGCCATCATCAGTTGGGTC ATAGCCACTTTCGGCATTCAAATCTTCCATTACTACGAGCGGTATGTGTGACTGACCAAGGTTTCTAAATTTTGC TACTGACGGTACCAGATTTGCCTTTCTCCCCCAGCTTATCGTTGTTTGCATACTGTTCGGTATGTCGGGGACGAA ATATGACTTGTCCACACCATCCACTGGCGACGCTCGCACAGTAGCCGGAAACCGGTAAGTCCACTTCAGGTCATT TAATAAACTCATACTCACATGTCACCCACTCGCAGTCTGTCCTTCTTCTCGCTTTGTCTCAGTGCCGCAATTACA TATGCACCTCTTGCGGCAGACTTCTTCGTCTATTATCCTCAGAATACCTCGAGGACATCTCTCTTTTTCCTCTCC TTGGGCGGCCTAATGACCTCTTTCACCATGGCATTCCTCGTCGGCATCGGTCTCGCATCGGGCATCACCTCGGAC CCAGCGTACAGCAAAGCATTCGCCGACGGTGCCGGAGCACTTATCGTCGAAGGGTTCAGCCCTCTTAATGGATTT GGCAAGTTTTGCGCCGTAGTCGTTGCACTCGGTCTTATCGCCAACACCATCCCACCCACGTACTCGGCTGGCGTA GATTTCCAGATCCTCGGAAGATACGCCGAAAAGGTGCCCAGAGCCATTTGGAACGCCATCGGAGTGATCATCTAC ACTGTGTGCGCCCTAGCGGGCCGAAGCAATCTTTCCGACATCTTCACCAACTTCCTCGCGCTCATGGGCTACTGG GTCGCCATCTGGATAGCCATTATCCTAGAAGACCGCTTTATCTTCCGCGCCCGCAGCGGATACAACTGGCATTCC TGGAACGACCCGTCGAAGCTGCCCTTGGGCATTTCCGCTTTCATTGCCTTCTTGATCGGTTGGGCAGGCGCGATC CTATGCATGGCGCAGGTGTGGTATATCGGGCCTTTGGCACGATTGGTGGGTGAATATGGCGCCGATGTAAGCAGA CCCGATGACATGACAAACAAATATTTGATTGCTTCACACACTAACTAAACAAATATAGATGGGCACCTACGTTGC TTTTTCATGGACGTGTGTGGTCTATCCGCCTCTCCGATATGTCGAACTCCGCTACTTTGGACGGTGA |