Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g1793.t1
Gene name
Location	scaffold_008:333303..334227
Strand	-
Gene length (bp)	924
Transcript length (bp)	741
Coding sequence length (bp)	741
Protein length (aa)	247

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06687	SUR7	SUR7/PalI family	6.5E-41	10	205

GO

GO Term	Description	Terminal node
GO:0005886	plasma membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0016020	membrane	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	114	136	22
3	148	170	22
4	190	212	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g1793.t1 MALSRVAMGFLGLFFTAGALLLMFLTLLGGARNSRPLNEIFFLQVDTSNIPGAPSLSRWTFWEICAVTANGKNLC GSSYPDFPFDPPSHRNFDTTQNIPSAFIGTNHYFLTSRFSFPFLIIALFFGVVSLFTGFLAMCTRIGSYISSLMA WIALVFQIITTCLITAVYVQGRNKFNANGQSASVGVKAFAFMWTAVACLMLACMFYCMGGAVGRKERGYSGREHR RRGFFSSARSNSVRSNKETAP*
Coding	>Ani_SJS72_1\|g1793.t1 ATGGCTCTCAGCAGAGTTGCAATGGGCTTCCTAGGCCTGTTCTTCACGGCCGGTGCTCTTCTGTTGATGTTCCTG ACTTTGTTGGGCGGAGCGAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTGCAGGTCGACACAAGCAATATC CCAGGTGCCCCATCCCTATCTCGCTGGACGTTCTGGGAGATATGTGCAGTGACGGCGAATGGAAAGAATCTTTGC GGATCGTCGTACCCAGACTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGACACCACTCAGAACATTCCCTCT GCTTTCATTGGCACGAACCACTACTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTATTCTTT GGCGTGGTGTCGCTGTTCACTGGGTTCCTGGCCATGTGCACGCGCATTGGCAGCTACATATCTTCGCTCATGGCT TGGATCGCCTTGGTTTTCCAGATTATCACGACTTGCCTCATCACGGCTGTTTACGTCCAGGGCCGCAACAAGTTT AACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGGCTTTCGCTTTCATGTGGACTGCTGTGGCTTGCTTGATG CTTGCATGCATGTTCTATTGCATGGGTGGTGCTGTCGGACGCAAAGAAAGAGGATACAGTGGCCGTGAGCACCGT CGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTGTAAGAAGCAACAAGGAGACCGCGCCATAA
Transcript	>Ani_SJS72_1\|g1793.t1 ATGGCTCTCAGCAGAGTTGCAATGGGCTTCCTAGGCCTGTTCTTCACGGCCGGTGCTCTTCTGTTGATGTTCCTG ACTTTGTTGGGCGGAGCGAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTGCAGGTCGACACAAGCAATATC CCAGGTGCCCCATCCCTATCTCGCTGGACGTTCTGGGAGATATGTGCAGTGACGGCGAATGGAAAGAATCTTTGC GGATCGTCGTACCCAGACTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGACACCACTCAGAACATTCCCTCT GCTTTCATTGGCACGAACCACTACTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTATTCTTT GGCGTGGTGTCGCTGTTCACTGGGTTCCTGGCCATGTGCACGCGCATTGGCAGCTACATATCTTCGCTCATGGCT TGGATCGCCTTGGTTTTCCAGATTATCACGACTTGCCTCATCACGGCTGTTTACGTCCAGGGCCGCAACAAGTTT AACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGGCTTTCGCTTTCATGTGGACTGCTGTGGCTTGCTTGATG CTTGCATGCATGTTCTATTGCATGGGTGGTGCTGTCGGACGCAAAGAAAGAGGATACAGTGGCCGTGAGCACCGT CGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTGTAAGAAGCAACAAGGAGACCGCGCCATAA
Gene	>Ani_SJS72_1\|g1793.t1 ATGGCTCTCAGCAGTGAGTATATTCCCTGCAGGACGGATTTTTGCTGCGTCGCACAACGACTAAACTGACATTAA CTGTGCTCTAGGAGTTGCAATGGGCTTCCTAGGCCTGTTCTTCACGGCCGGTGCTCTTCTGTTGATGTTCCTGAC TTTGTTGGGCGGAGCGAGAAACTCGCGGCCCTTGAACGAAATCTTCTTCCTGCAGGTCGACACAAGCAATATCCC AGGTGCCCCATCCCTATCTCGCTGGACGTTCTGGGAGATATGTGCAGTGACGGCGAATGGAAAGAATCTTTGCGG ATCGTCGTACCCAGACTTCCCATTTGATCCTCCGAGCCACCGCAACTTTGACACCACTCAGAACATTCCCTCTGC TTTCATTGGGTAAGCAAGAACTCAATTGCCGGCTCACCTATACTATGATCGCGATCTAACATGCCACAGCACGAA CCACTACTTCCTGACATCTCGGTTCTCGTTCCCCTTCCTCATCATCGCGCTATTCTTTGGCGTGGTGTCGCTGTT CACTGGGTTCCTGGCCATGTGCACGCGCATTGGCAGCTACATATCTTCGCTCATGGCTTGGATCGCCTTGGTTTT CCAGATTATCACGACTTGCCTCATCACGTAAGTTTTAACAGAAGAATTAAACACAAAGCTTTACTGACAACCATC AGGGCTGTTTACGTCCAGGGCCGCAACAAGTTTAACGCCAATGGCCAGAGCGCCAGCGTGGGTGTTAAGGCTTTC GCTTTCATGTGGACTGCTGTGGCTTGCTTGATGCTTGCATGCATGTTCTATTGCATGGGTGGTGCTGTCGGACGC AAAGAAAGAGGATACAGTGGCCGTGAGCACCGTCGGCGCGGTTTCTTCTCGTCCGCACGCTCAAACAGTGTAAGA AGCAACAAGGAGACCGCGCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail