© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g1769.t1 |
| Gene name | |
| Location | scaffold_008:266061..268003 |
| Strand | - |
| Gene length (bp) | 1942 |
| Transcript length (bp) | 1722 |
| Coding sequence length (bp) | 1722 |
| Protein length (aa) | 574 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.4E-10 | 61 | 417 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.5E-12 | 63 | 339 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 53 | 75 | 22 |
| 2 | 90 | 112 | 22 |
| 3 | 119 | 137 | 18 |
| 4 | 141 | 163 | 22 |
| 5 | 176 | 198 | 22 |
| 6 | 208 | 230 | 22 |
| 7 | 254 | 276 | 22 |
| 8 | 296 | 313 | 17 |
| 9 | 333 | 355 | 22 |
| 10 | 370 | 392 | 22 |
| 11 | 399 | 418 | 19 |
| 12 | 428 | 450 | 22 |
| 13 | 463 | 485 | 22 |
| 14 | 539 | 556 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1769.t1 MATEKPPTTTGVSEDPISLDPDTPQQPVEDEQDKQDGVRVAEAVTASWSKKSLIITYASMWLLYFVNGLNSSLTA NLSAYITSDFSEHSLLTVITVVTSVMGAACVMPIAKVLNLWDRTLGVCIMVLIAIMGLIMMAGCNNIATYCAAQA FYTVGFTGVIFCVDVMTSDTSSLRNRGIAYAFTSSPYIITAFAGSPLSNQFHETNWRWAYGTICIILPIVAMPLV ITWELAKRKADKEGRLQYKPRSTRTWWQSTWFYIIEFDIIGILFMIGGLILFLTSFNIAGNTEGEWKSAKIIAMM IVGFFVLVGFVAYERWGAPKPFIPYHLLANRTVIGACLLDITYQVSYYCWASYFTSFLQVVYNTSLTQAGYISAI FDLMDPIWLIGCGYLIRVTGRFKWLLMWAVPLYLLASGLMIYFRQPGFSIGYMCMCQIFLAVGGGTLILIEQVAV LAASRHEDYAAMLALLSTFGNLGGAVGSSVSGAIWTNTLPQKLRELLPAETKDQWAEIYESLDVQLSYPVGSETR IAIQNAYAWSQRNMMIAGTAVMGLSIAWVLMMRNIKIKDNKDVRQVLF* |
| Coding | >Ani_SJS72_1|g1769.t1 ATGGCCACTGAAAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAA CAGCCTGTCGAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAG AAATCTCTGATTATCACTTATGCTTCCATGTGGCTCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCG AACCTTTCCGCGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTC ATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATG GTGTTGATTGCTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGCA TTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGACCTCCGATACATCCTCGCTCCGCAAT CGAGGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTCCAACCAG TTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCTGGTC ATAACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCACCCGGACC TGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACATCATCGGCATCCTCTTCATGATCGGCGGACTTATC CTCTTCCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCCAAGATCATCGCAATGATG ATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTCGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTAC CACCTCCTCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGGACATAACCTACCAAGTCTCCTACTACTGCTGG GCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATC TTCGACCTCATGGACCCCATCTGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACCGGCCGCTTCAAGTGGCTT CTTATGTGGGCTGTCCCGCTCTACCTCCTGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATT GGATACATGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAGCAGGTTGCTGTC CTGGCGGCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGCT GTCGGTAGTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAG ACGAAGGATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGT ATTGCGATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTTGTCG ATTGCTTGGGTGTTGATGATGAGGAATATTAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG |
| Transcript | >Ani_SJS72_1|g1769.t1 ATGGCCACTGAAAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAA CAGCCTGTCGAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAG AAATCTCTGATTATCACTTATGCTTCCATGTGGCTCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCG AACCTTTCCGCGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTC ATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATG GTGTTGATTGCTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGCA TTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGACCTCCGATACATCCTCGCTCCGCAAT CGAGGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTCCAACCAG TTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCTGGTC ATAACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCACCCGGACC TGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACATCATCGGCATCCTCTTCATGATCGGCGGACTTATC CTCTTCCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCCAAGATCATCGCAATGATG ATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTCGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTAC CACCTCCTCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGGACATAACCTACCAAGTCTCCTACTACTGCTGG GCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATC TTCGACCTCATGGACCCCATCTGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACCGGCCGCTTCAAGTGGCTT CTTATGTGGGCTGTCCCGCTCTACCTCCTGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATT GGATACATGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAGCAGGTTGCTGTC CTGGCGGCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGCT GTCGGTAGTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAG ACGAAGGATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGT ATTGCGATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTTGTCG ATTGCTTGGGTGTTGATGATGAGGAATATTAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG |
| Gene | >Ani_SJS72_1|g1769.t1 ATGGCCACTGAAAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAA CAGCCTGTCGAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAG AAATCTCTGATTATCACTTATGCTTCGTGAGTGGCTTGATTTCTGTTCCTCTGGAGCGACTGCTGAACGGTGTAT AGCATGTGGCTCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGT GATTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTCATGGGTGCTGCTTGTGTCATGCCT ATTGCTAAGGTACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTG ATTATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGTGAGTTTTTACCCTCTGTGTATACGA GATCGATCATTCTTATCGTCTCATCTGCTATGCTTCAAGAATGCCCAAGCGTACTAAATCCGCGACACTAATAGG CATTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGACCTCCGATACATCCTCGCTCCGCA ATCGAGGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCCCTCTCCAACC AGTTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCTGG TCATAACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCTTGCAATACAAGCCGCGAAGCACCCGGA CCTGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACAGTAAGTCGTCTCCCCAATAAACCTCTACTACCC CAACGCCCCCGACTAACACGCTCTTCCTCAACCAGTCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTCTT CCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAGTGGAAATCCGCCAAGATCATCGCAATGATGATCGT CGGTTTCTTCGTCCTCGTCGGCTTCGTCGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCACCT CCTCGCCAACCGCACCGTCATCGGCGCCTGCCTCCTGGACATAACCTACCAAGTCTCCTACTACTGCTGGGCCAG CTACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTCGA CCTCATGGACCCCATCTGGCTGATCGGCTGCGGGTATCTGATCCGCGTCACCGGCCGCTTCAAGTGGCTTCTTAT GTGGGCTGTCCCGCTCTACCTCCTGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGATA CATGTGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAGCAGGTTGCTGTCCTGGC GGCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGCTGAGCACTTTTGGTAATCTGGGTGGTGCTGTCGG TAGTAGTGTCTCCGGTGCTATTTGGACTAACACCCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAGACGAA GGATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATTGC GATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTTGTCGATTGC TTGGGTGTTGATGATGAGGAATATTAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG |