Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g1717.t1
Gene name
Location	scaffold_008:118510..119248
Strand	+
Gene length (bp)	738
Transcript length (bp)	642
Coding sequence length (bp)	642
Protein length (aa)	214

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10639	TMEM234	Putative transmembrane family 234	6.5E-26	127	211

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	133	155	22
3	165	187	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g1717.t1 MDPETDPSNPPVINYILSFLLVGVAWGFTTPFIRRAAADFAARQQQNQQQDDNNNNISINSNDNVPLTSVTPEYT DEARPEEGGEESEEDNPPPATHQEQQQQQQQQPAWMQQNQQKPPSWLRKKIATLFWTVVNLLRTPAYSIPLVVNL TGSVWFFLLVGKHELSLTVPLANSSAFLFTVLGEWYVERKVIERETWLGMALVLGGIALCVMA*
Coding	>Ani_SJS72_1\|g1717.t1 ATGGACCCAGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCTCTCCTTCCTTCTAGTCGGGGTAGCC TGGGGCTTCACAACCCCTTTCATCCGGCGCGCAGCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAG GACGACAACAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCTGACATCTGTTACTCCCGAATACACC GATGAAGCACGTCCCGAAGAAGGAGGAGAAGAAAGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAA CAGCAGCAGCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAAACCTCCCTCCTGGCTGCGCAAAAAG ATCGCTACTTTATTCTGGACAGTGGTGAATTTGCTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTA ACGGGGAGTGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGAGTTATCGTTGACCGTTCCCCTCGCCAACTCTAGT GCCTTTTTGTTCACGGTGCTCGGGGAATGGTATGTGGAGAGGAAGGTCATTGAGCGCGAAACGTGGTTGGGGATG GCGTTGGTGTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAG
Transcript	>Ani_SJS72_1\|g1717.t1 ATGGACCCAGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCTCTCCTTCCTTCTAGTCGGGGTAGCC TGGGGCTTCACAACCCCTTTCATCCGGCGCGCAGCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAG GACGACAACAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCTGACATCTGTTACTCCCGAATACACC GATGAAGCACGTCCCGAAGAAGGAGGAGAAGAAAGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAA CAGCAGCAGCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAAACCTCCCTCCTGGCTGCGCAAAAAG ATCGCTACTTTATTCTGGACAGTGGTGAATTTGCTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTA ACGGGGAGTGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGAGTTATCGTTGACCGTTCCCCTCGCCAACTCTAGT GCCTTTTTGTTCACGGTGCTCGGGGAATGGTATGTGGAGAGGAAGGTCATTGAGCGCGAAACGTGGTTGGGGATG GCGTTGGTGTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAG
Gene	>Ani_SJS72_1\|g1717.t1 ATGGACCCAGAAACAGACCCCTCCAATCCCCCCGTAATCAACTACATTCTCTCCTTCCTTCTAGTCGGGGTAGCC TGGGGCTTCACAACCCCTTTCATCCGGCGCGCAGCCGCGGACTTTGCAGCCCGCCAACAGCAAAACCAGCAACAG GACGACAACAACAACAACATCAGCATCAACAGTAATGACAATGTTCCTCTGACATCTGTTACTCCCGAATACACC GATGAAGCACGTCCCGAAGAAGGAGGAGAAGAAAGCGAGGAAGATAATCCTCCCCCAGCCACCCACCAAGAACAA CAGCAGCAGCAACAGCAACAACCAGCATGGATGCAGCAAAACCAGCAGAAACCTCCCTCCTGGCTGCGCAAAAAG ATCGCTACTTTATTCTGGACAGTGGTGAATTTGCTTCGCACGCCTGCGTACTCTATCCCCCTCGTTGTGAATTTA ACGGGGAGTGTGTGGTTCTTTTTGTTGGTGGGGAAGCATGGTATGTTTTCTATTTTATTCCATAGACCTAATTTA TTTTTGGAGGTGATATGTGGTAGTAGTATGGATGTGAGGATATACTAATGATGATGTATAGAGTTATCGTTGACC GTTCCCCTCGCCAACTCTAGTGCCTTTTTGTTCACGGTGCTCGGGGAATGGTATGTGGAGAGGAAGGTCATTGAG CGCGAAACGTGGTTGGGGATGGCGTTGGTGTTGGGCGGGATTGCGCTTTGTGTTATGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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