Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1704.t1
Gene name
Locationscaffold_008:87903..88775
Strand+
Gene length (bp)872
Transcript length (bp)630
Coding sequence length (bp)630
Protein length (aa) 210

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 97 119 22
3 132 154 22
4 169 191 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1704.t1
MDFHLVPRGEDRNYTGFLTKTIVYTASLIVFLASFGLTVASIVVPKWVTFTDSDPRWRYTYGLHRRCSHVTGLCE
SFPQKDDCHGDDRYFCSMWRSVGFLMSFAIVLEGMSVVAYLIVLSGGKRLRESGWKIVSLLIILSAAVQAASMSL
VAYLVDNEDRFASGWVLDESWIFCTVSWCVSLFVAGVLILAGNTLPSEGGYELIPDQIN*
Coding >Ani_SJS72_1|g1704.t1
ATGGATTTCCATCTGGTGCCTCGAGGGGAAGACCGCAATTATACCGGGTTCCTCACCAAAACCATTGTCTATACG
GCCTCGTTGATCGTATTCCTGGCCTCTTTTGGTCTCACCGTGGCCTCTATCGTCGTTCCAAAATGGGTCACCTTT
ACTGATTCCGATCCCCGCTGGCGTTACACCTACGGCCTCCACCGTCGCTGCTCCCATGTAACCGGTCTATGCGAG
TCATTTCCCCAGAAAGATGACTGCCACGGCGACGATCGCTATTTCTGCTCCATGTGGCGCTCCGTCGGCTTTCTC
ATGTCGTTCGCCATCGTTTTGGAGGGAATGAGCGTGGTCGCGTATTTGATCGTCTTGTCTGGGGGGAAGCGCCTG
CGCGAGTCGGGGTGGAAGATAGTTAGTTTGTTGATTATTCTGTCGGCGGCGGTACAGGCAGCTAGCATGTCGCTT
GTGGCATACCTCGTCGACAATGAAGACCGATTCGCCTCTGGCTGGGTATTGGATGAGTCGTGGATTTTCTGCACC
GTGAGCTGGTGCGTGAGTCTGTTCGTCGCCGGAGTGTTGATCCTCGCGGGTAATACACTGCCTTCGGAGGGTGGT
TATGAGTTGATCCCGGATCAGATCAACTAA
Transcript >Ani_SJS72_1|g1704.t1
ATGGATTTCCATCTGGTGCCTCGAGGGGAAGACCGCAATTATACCGGGTTCCTCACCAAAACCATTGTCTATACG
GCCTCGTTGATCGTATTCCTGGCCTCTTTTGGTCTCACCGTGGCCTCTATCGTCGTTCCAAAATGGGTCACCTTT
ACTGATTCCGATCCCCGCTGGCGTTACACCTACGGCCTCCACCGTCGCTGCTCCCATGTAACCGGTCTATGCGAG
TCATTTCCCCAGAAAGATGACTGCCACGGCGACGATCGCTATTTCTGCTCCATGTGGCGCTCCGTCGGCTTTCTC
ATGTCGTTCGCCATCGTTTTGGAGGGAATGAGCGTGGTCGCGTATTTGATCGTCTTGTCTGGGGGGAAGCGCCTG
CGCGAGTCGGGGTGGAAGATAGTTAGTTTGTTGATTATTCTGTCGGCGGCGGTACAGGCAGCTAGCATGTCGCTT
GTGGCATACCTCGTCGACAATGAAGACCGATTCGCCTCTGGCTGGGTATTGGATGAGTCGTGGATTTTCTGCACC
GTGAGCTGGTGCGTGAGTCTGTTCGTCGCCGGAGTGTTGATCCTCGCGGGTAATACACTGCCTTCGGAGGGTGGT
TATGAGTTGATCCCGGATCAGATCAACTAA
Gene >Ani_SJS72_1|g1704.t1
ATGGATTTCCATCTGGTGCCTCGAGGGGAAGACCGCAATTATACCGGGTTCCTCACCAAAACCATTGTCTATACG
GCCTCGTTGATCGTATTCCTGGCCTGTAAGTAAGGTGGCGCTCGTTCTGTTCGCTAGTTACAGAGCTAGCAATTA
GTACCTGGAGTTCTCCTGCCCTCGATGCAATTCGTGCACGCGCACACAACACCAACTAACAAGTCTCTCCACGCA
GCTTTTGGTCTCACCGTGGCCTCTATCGTCGTTCCAAAATGGGTCACCTTTACTGATTCCGATGTTGGTTTTCCG
TCCCGTCCAACTGTCCGACCAGCCACTAACAAAGAATGATAAACTATACAGCCCCGCTGGCGTTACACCTACGGC
CTCCACCGTCGCTGCTCCCATGTAACCGGTCTATGCGAGTCATTTCCCCAGAAAGATGACTGCCACGGCGACGAT
CGCTATTTCTGCTCCATGTGGCGCTCCGTCGGCTTTCTCATGTCGTTCGCCATCGTTTTGGAGGGAATGAGCGTG
GTCGCGTATTTGATCGTCTTGTCTGGGGGGAAGCGCCTGCGCGAGTCGGGGTGGAAGATAGTTAGTTTGTTGATT
ATTCTGTCGGCGGCGGTACAGGCAGCTAGCATGTCGCTTGTGGTGAGTTTCCTGCTCATGTTCGTACCTATTGGT
GGCATGCTAAGAGGGGTTAGGCATACCTCGTCGACAATGAAGACCGATTCGCCTCTGGCTGGGTATTGGATGAGT
CGTGGATTTTCTGCACCGTGAGCTGGTGCGTGAGTCTGTTCGTCGCCGGAGTGTTGATCCTCGCGGGTAATACAC
TGCCTTCGGAGGGTGGTTATGAGTTGATCCCGGATCAGATCAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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