Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1669.t1
Gene name
Locationscaffold_007:601920..602405
Strand-
Gene length (bp)485
Transcript length (bp)432
Coding sequence length (bp)432
Protein length (aa) 144

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01042 Ribonuc_L-PSP Endoribonuclease L-PSP 6.7E-22 20 132

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1669.t1
MSHLQYYAYEGVGVRNRNTFRYSQAVRIGDRIECAGQGGWNSENGIFEKEINAQIDLAFANVERNLKDAGGKGWS
QVFRVNSYHVPINNEALAAMVRNFEKYMPDHQPIWTCVGVTRLGEDDMRVEIEVVAHDPEGAKATGSL*
Coding >Ani_SJS72_1|g1669.t1
ATGTCTCATCTACAATACTACGCATACGAAGGGGTTGGTGTCCGGAATCGGAACACTTTCCGCTATAGCCAAGCT
GTCCGTATTGGAGATCGGATCGAATGCGCAGGACAAGGAGGATGGAATTCTGAAAATGGCATATTTGAAAAGGAA
ATCAACGCTCAGATTGACCTCGCCTTTGCCAACGTTGAGCGCAATCTGAAAGATGCTGGCGGCAAGGGCTGGTCT
CAGGTGTTCCGTGTGAACTCATACCATGTACCTATCAACAACGAAGCCCTTGCTGCAATGGTTCGTAACTTTGAA
AAGTACATGCCGGATCATCAGCCAATTTGGACATGTGTCGGGGTTACTAGGCTCGGAGAAGATGATATGCGAGTG
GAGATTGAGGTAGTAGCTCACGATCCGGAAGGTGCAAAGGCTACAGGCTCTTTATAA
Transcript >Ani_SJS72_1|g1669.t1
ATGTCTCATCTACAATACTACGCATACGAAGGGGTTGGTGTCCGGAATCGGAACACTTTCCGCTATAGCCAAGCT
GTCCGTATTGGAGATCGGATCGAATGCGCAGGACAAGGAGGATGGAATTCTGAAAATGGCATATTTGAAAAGGAA
ATCAACGCTCAGATTGACCTCGCCTTTGCCAACGTTGAGCGCAATCTGAAAGATGCTGGCGGCAAGGGCTGGTCT
CAGGTGTTCCGTGTGAACTCATACCATGTACCTATCAACAACGAAGCCCTTGCTGCAATGGTTCGTAACTTTGAA
AAGTACATGCCGGATCATCAGCCAATTTGGACATGTGTCGGGGTTACTAGGCTCGGAGAAGATGATATGCGAGTG
GAGATTGAGGTAGTAGCTCACGATCCGGAAGGTGCAAAGGCTACAGGCTCTTTATAA
Gene >Ani_SJS72_1|g1669.t1
ATGTCTCATCTACAATACTACGCATACGAAGGGGTTGGTGTCCGGAATCGGAACACTTTCCGCTATAGCCAAGCT
GTCCGTATTGGAGATCGGATCGAATGCGCAGGACAAGGTCAGAACAGCCAGACACTCCAAAGCATCGCAAATTCT
CACTGTGAGTTTTAGGAGGATGGAATTCTGAAAATGGCATATTTGAAAAGGAAATCAACGCTCAGATTGACCTCG
CCTTTGCCAACGTTGAGCGCAATCTGAAAGATGCTGGCGGCAAGGGCTGGTCTCAGGTGTTCCGTGTGAACTCAT
ACCATGTACCTATCAACAACGAAGCCCTTGCTGCAATGGTTCGTAACTTTGAAAAGTACATGCCGGATCATCAGC
CAATTTGGACATGTGTCGGGGTTACTAGGCTCGGAGAAGATGATATGCGAGTGGAGATTGAGGTAGTAGCTCACG
ATCCGGAAGGTGCAAAGGCTACAGGCTCTTTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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