© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1580.t1 |
| Gene name | |
| Location | scaffold_007:308200..310071 |
| Strand | + |
| Gene length (bp) | 1871 |
| Transcript length (bp) | 1725 |
| Coding sequence length (bp) | 1725 |
| Protein length (aa) | 575 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00860 | Xan_ur_permease | Permease family | 1.3E-19 | 94 | 479 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 105 | 127 | 22 |
| 2 | 147 | 169 | 22 |
| 3 | 190 | 212 | 22 |
| 4 | 245 | 262 | 17 |
| 5 | 267 | 289 | 22 |
| 6 | 329 | 351 | 22 |
| 7 | 371 | 393 | 22 |
| 8 | 408 | 430 | 22 |
| 9 | 437 | 459 | 22 |
| 10 | 474 | 496 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1580.t1 MRYLDWVHRVNLAVARSPVGWWFRLENSGHPNERKGSFFFTEMRAGLATFFAMAYIISVNATITSDTGGTCVCPP ESYADQCDTNTEYLLCVQEVKRDIVTATAAIAALSTFFMGVFSNLPVALAPGMGLNAYFAYTVVGHHGFGMIPYR VALTAVFVEGWVFLALTLLGIRQWLARALPASIKLATGTGIGLYLTLIGLTYSAGIGLVTGATDSPIELAGCVDS LRDATTGLCPSDAKMRNPTMWIGIFCGGVLTALLMLYRVKGAVIIGILLVSIISWPRPTPVTYFPHTELGNSMFD FFKQVVTFHPIKHTLVAQDWDITGHGSQFGLAFITFLYVDILDTTGTLYSMARFAGTVDPRTQDFEGSALAYMVD AISVSIGSLFGTSPVTAFVESGAGISEGGKTGLTSCMTGICFFIAVFFAPIFASIPPWATGCTLVIVGALMVKAA AEINWRYLGDAVPAFLTIAIMPFTYSIAYGLIAGILSYITLNGIIWAIEKLTGGRIVPPNKDEKEPWSWRIPGGF FPPWLRRAVRGKKDFWREDERDRSVMDGGSVESQDRPEKQDVAAASKDM* |
| Coding | >Ani_SJS72_1|g1580.t1 ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAGCCCTGTCGGGTGGTGGTTTCGTCTG GAAAACTCAGGTCATCCTAATGAACGAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACACGGGCGGAACCTGCGTCTGCCCACCC GAAAGCTATGCCGACCAATGCGACACCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTTCTCGAACTTGCCCGTGGCGCTGGCA CCAGGCATGGGGCTGAACGCATACTTTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGACGCTACTGGGGATCCGCCAGTGGTTG GCCCGCGCGCTGCCTGCGTCGATCAAGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTATTGAACTGGCAGGCTGTGTGGATAGT CTCCGCGATGCGACGACCGGCCTCTGTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGCCGTCATTATAGGAATCCTGCTGGTG TCCATCATCTCGTGGCCGCGACCGACCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGCACAGGACTGGGATATCACGGGGCAC GGATCGCAGTTTGGGCTGGCCTTCATTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGGCAGTGCTCTGGCCTACATGGTGGAC GCCATTTCCGTCTCGATCGGATCCCTCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTTCTTCATTGCCGTATTCTTCGCCCCG ATCTTCGCCTCCATTCCCCCTTGGGCCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGACCATTGCCATCATGCCGTTCACCTAC AGCATCGCTTACGGGTTGATCGCGGGTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA TTGACGGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGGTCGTGGAGGATTCCGGGCGGATTC TTCCCGCCCTGGCTGCGGCGCGCCGTTCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTG ATGGATGGGGGATCGGTGGAGTCACAGGATCGACCGGAAAAGCAAGACGTGGCGGCCGCGAGCAAGGATATGTAG |
| Transcript | >Ani_SJS72_1|g1580.t1 ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAGCCCTGTCGGGTGGTGGTTTCGTCTG GAAAACTCAGGTCATCCTAATGAACGAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACACGGGCGGAACCTGCGTCTGCCCACCC GAAAGCTATGCCGACCAATGCGACACCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTTCTCGAACTTGCCCGTGGCGCTGGCA CCAGGCATGGGGCTGAACGCATACTTTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGACGCTACTGGGGATCCGCCAGTGGTTG GCCCGCGCGCTGCCTGCGTCGATCAAGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTATTGAACTGGCAGGCTGTGTGGATAGT CTCCGCGATGCGACGACCGGCCTCTGTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGCCGTCATTATAGGAATCCTGCTGGTG TCCATCATCTCGTGGCCGCGACCGACCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGCACAGGACTGGGATATCACGGGGCAC GGATCGCAGTTTGGGCTGGCCTTCATTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGGCAGTGCTCTGGCCTACATGGTGGAC GCCATTTCCGTCTCGATCGGATCCCTCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTTCTTCATTGCCGTATTCTTCGCCCCG ATCTTCGCCTCCATTCCCCCTTGGGCCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGACCATTGCCATCATGCCGTTCACCTAC AGCATCGCTTACGGGTTGATCGCGGGTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA TTGACGGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGGTCGTGGAGGATTCCGGGCGGATTC TTCCCGCCCTGGCTGCGGCGCGCCGTTCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTG ATGGATGGGGGATCGGTGGAGTCACAGGATCGACCGGAAAAGCAAGACGTGGCGGCCGCGAGCAAGGATATGTAG |
| Gene | >Ani_SJS72_1|g1580.t1 ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAGCCCTGTCGGGTGGTGGTTTCGTCTG GAAAACTCAGGTCATGTAGGTTTGCTGGCTGAGCACGCGACACGGTGGTGAACTAATCCTGCGCAGCCTAATGAA CGAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTTTTCGCCATGGCCTACATCATTAGC GTGAATGCCACCATCACCTCCGACACGGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGAC ACCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTCACCGCGACCGCCGCTATCGCTGCG CTCTCCACCTTCTTTATGGGCGTTTTCTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATAC TTTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGAGTGGCTCTGACCGCGGTCTTTGTC GAAGGATGGGTCTTTCTGGCCTTGACGCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATC AAGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTGACCTACAGTGCGGGAATCGGGTTG GTAACAGGCGCCACGGACTCGCCTATTGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTC TGTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTCTGTGGTGGAGTCCTGACAGCTCTG CTGATGCTTTATCGGGTGAAAGGCGCCGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCG ACCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGACTTCTTCAAGCAAGTCGTTACCTTC CACCCGATCAAGCATACGCTGGTCGCACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTC ATTACCTTCCTGGTTGGTTGCATGATGTCACCCGCTAAAAACGGCAAGCTAATCCATGCAGTATGTGGATATCCT CGATACCACCGGCACGCTATACTCCATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG CAGTGCTCTGGCCTACGTAAGTGATTTTCCCATGTGTTGCGCAACCTTGACTGACTAGTCAGATGGTGGACGCCA TTTCCGTCTCGATCGGATCCCTCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATCTCCG AAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTTCTTCATTGCCGTATTCTTCGCCCCGATCT TCGCCTCCATTCCCCCTTGGGCCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCGGCCG AGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGACCATTGCCATCATGCCGTTCACCTACAGCA TCGCTTACGGGTTGATCGCGGGTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAATTGA CGGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGGTCGTGGAGGATTCCGGGCGGATTCTTCC CGCCCTGGCTGCGGCGCGCCGTTCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGATGG ATGGGGGATCGGTGGAGTCACAGGATCGACCGGAAAAGCAAGACGTGGCGGCCGCGAGCAAGGATATGTAG |