Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1388.t1
Gene name
Locationscaffold_006:344290..345338
Strand-
Gene length (bp)1048
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 20 37 17
2 47 66 19
3 78 100 22
4 159 181 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1388.t1
MRIARPSFNPGRTKNLIHGFQGFIIFLAWALTIAVFTKGGGIDGRSAWYFALCWFSIPGLIYLVAVPMWPRARRF
GNVYAFATVDCLYAILWFSAWVCVASYVAEGKSKGKSDSSSDSSSSSSSSSSSSSRRDTSSSDSSSKSGCDNWAY
GSASKCKVSTATVILGVVVFLLFCVTAFMSFRNVSHFRRTGTLPDAVSDPTFAAQTKAAFSSNPAHDFEEEEDDF
RSRAGIGSSVRGDRDEDYALLQQSEVDEFGNSHAARSALSGTYDPTVSGGSVLHDYNTSYGGAHGQHYGGASEFG
SSVSGYGR*
Coding >Ani_SJS72_1|g1388.t1
ATGAGAATCGCTCGGCCTTCGTTCAACCCCGGGAGGACGAAAAACCTCATCCACGGATTCCAGGGGTTCATCATC
TTCCTGGCGTGGGCCTTGACCATCGCTGTGTTCACAAAGGGTGGTGGCATTGATGGGCGTTCAGCCTGGTACTTT
GCTTTGTGCTGGTTCAGTATCCCCGGCCTGATCTACCTCGTGGCAGTGCCCATGTGGCCGCGCGCACGACGCTTC
GGAAATGTTTATGCCTTCGCAACCGTCGACTGCCTGTACGCCATTTTGTGGTTCTCTGCTTGGGTTTGTGTGGCT
AGCTATGTGGCGGAAGGCAAGAGTAAGGGAAAGTCGGACTCTAGCTCCGATTCCAGCTCCAGCAGCAGTAGCTCC
AGCAGTTCGTCGAGCAGAAGGGACACCAGCAGCAGTGACAGCAGCAGCAAAAGCGGATGCGATAACTGGGCCTAC
GGAAGCGCAAGTAAATGCAAGGTCAGCACAGCGACTGTGATCCTGGGCGTTGTTGTCTTCCTGCTCTTCTGCGTA
ACTGCCTTCATGTCCTTCCGCAATGTCTCGCATTTCCGCCGCACCGGAACCTTGCCCGACGCTGTCTCCGATCCC
ACCTTTGCCGCGCAGACAAAAGCCGCCTTTTCCTCGAACCCTGCCCATGATTTCGAGGAGGAAGAAGACGACTTC
CGCTCCCGCGCTGGTATCGGCTCCTCTGTCCGTGGCGACAGGGACGAGGACTACGCTCTGCTGCAGCAGAGCGAG
GTGGACGAGTTTGGAAACTCACACGCTGCACGCTCGGCGCTATCAGGCACATATGACCCGACGGTCTCTGGTGGA
AGCGTGCTGCACGACTACAACACCAGCTATGGCGGTGCACACGGCCAACATTATGGAGGAGCGTCCGAATTCGGA
TCCAGTGTAAGTGGCTATGGACGCTGA
Transcript >Ani_SJS72_1|g1388.t1
ATGAGAATCGCTCGGCCTTCGTTCAACCCCGGGAGGACGAAAAACCTCATCCACGGATTCCAGGGGTTCATCATC
TTCCTGGCGTGGGCCTTGACCATCGCTGTGTTCACAAAGGGTGGTGGCATTGATGGGCGTTCAGCCTGGTACTTT
GCTTTGTGCTGGTTCAGTATCCCCGGCCTGATCTACCTCGTGGCAGTGCCCATGTGGCCGCGCGCACGACGCTTC
GGAAATGTTTATGCCTTCGCAACCGTCGACTGCCTGTACGCCATTTTGTGGTTCTCTGCTTGGGTTTGTGTGGCT
AGCTATGTGGCGGAAGGCAAGAGTAAGGGAAAGTCGGACTCTAGCTCCGATTCCAGCTCCAGCAGCAGTAGCTCC
AGCAGTTCGTCGAGCAGAAGGGACACCAGCAGCAGTGACAGCAGCAGCAAAAGCGGATGCGATAACTGGGCCTAC
GGAAGCGCAAGTAAATGCAAGGTCAGCACAGCGACTGTGATCCTGGGCGTTGTTGTCTTCCTGCTCTTCTGCGTA
ACTGCCTTCATGTCCTTCCGCAATGTCTCGCATTTCCGCCGCACCGGAACCTTGCCCGACGCTGTCTCCGATCCC
ACCTTTGCCGCGCAGACAAAAGCCGCCTTTTCCTCGAACCCTGCCCATGATTTCGAGGAGGAAGAAGACGACTTC
CGCTCCCGCGCTGGTATCGGCTCCTCTGTCCGTGGCGACAGGGACGAGGACTACGCTCTGCTGCAGCAGAGCGAG
GTGGACGAGTTTGGAAACTCACACGCTGCACGCTCGGCGCTATCAGGCACATATGACCCGACGGTCTCTGGTGGA
AGCGTGCTGCACGACTACAACACCAGCTATGGCGGTGCACACGGCCAACATTATGGAGGAGCGTCCGAATTCGGA
TCCAGTGTAAGTGGCTATGGACGCTGA
Gene >Ani_SJS72_1|g1388.t1
ATGAGAATCGCTCGGCCTTCGTTCAACCCCGGGAGGACGAAAAACCTCATCCACGGATTCCAGGGGTTCATCATC
TTCCTGGCGTGGGCCTTGACCATCGCTGTGTTCACAAAGGGTGGTGGCATTGATGGGCGTTCAGCCTGGTACTTT
GCTTTGGTACGTTGCGATGAATGGAACCGCCAAACTTCAGGCGCCTGATGACCATGTACTGATTCTTGTTTGTTT
AGTGCTGGTTCAGTATCCCCGGCCTGATCTACCTCGTGGCAGTGCCCATGTGGCCGCGCGCACGACGCTTCGGAA
ATGTTTATGCCTTCGCAACCGTCGACTGCCTGTACGCCATTTTGTGGTTCTCTGCTTGGGTTTGTGTGGCTAGCT
ATGTGGCGGAAGGCAAGAGTAAGGGAAAGTCGGACTCTAGCTCCGATTCCAGCTCCAGCAGCAGTAGCTCCAGCA
GTTCGTCGAGCAGAAGGGACACCAGCAGCAGTGACAGCAGCAGCAAAAGCGGATGCGATAACTGGGCCTACGGAA
GCGCAAGTAAATGCAAGGTCAGCACAGCGACTGTGATCCTGGGCGTTGTTGTCTTGTAAGTATACCCATACGGCG
TTCCTATCATATGTGCTAATGATGTGATAGCCTGCTCTTCTGCGTAACTGCCTTCATGTCCTTCCGCAATGTCTC
GCATTTCCGCCGCACCGGAACCTTGCCCGACGCTGTCTCCGATCCCACCTTTGCCGCGCAGACAAAAGCCGCCTT
TTCCTCGAACCCTGCCCATGATTTCGAGGAGGAAGAAGACGACTTCCGCTCCCGCGCTGGTATCGGCTCCTCTGT
CCGTGGCGACAGGGACGAGGACTACGCTCTGCTGCAGCAGAGCGAGGTGGACGAGTTTGGAAACTCACACGCTGC
ACGCTCGGCGCTATCAGGCACATATGACCCGACGGTCTCTGGTGGAAGCGTGCTGCACGACTACAACACCAGCTA
TGGCGGTGCACACGGCCAACATTATGGAGGAGCGTCCGAATTCGGATCCAGTGTAAGTGGCTATGGACGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail