© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1374.t1 |
| Gene name | |
| Location | scaffold_006:304289..305157 |
| Strand | - |
| Gene length (bp) | 868 |
| Transcript length (bp) | 693 |
| Coding sequence length (bp) | 693 |
| Protein length (aa) | 231 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 1.1E-20 | 96 | 207 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 28 | 50 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 117 | 139 | 22 |
| 4 | 148 | 170 | 22 |
| 5 | 185 | 207 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1374.t1 MANMTEAIHDYYPSTIDLPHYVTNESSTFSLVAQFAVLWGLALGIASIIIRRPRTPVTQSDQFAFIWMCFTGCIH LFFESYFVVYHKTLAGSHTLFGQLWKEYSLSDSRYLTSDSFLVSMEAVTAFCWGPLAFLIAYCIATQHPARHVLQ LIVSVGQVYGDVLYYATSMFDLYYHEVSFCRPEGYYFWFYYVFKNFIWLAAGSYFAYESAVEITRGMKKLSAMDR KRKDC* |
| Coding | >Ani_SJS72_1|g1374.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCACCGGATGCATACAT CTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCT TTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAG CTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCAT GAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGCT GCTGGTTCTTATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG AAGCGGAAGGACTGTTAG |
| Transcript | >Ani_SJS72_1|g1374.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCACCGGATGCATACAT CTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCT TTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAG CTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCAT GAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGCT GCTGGTTCTTATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG AAGCGGAAGGACTGTTAG |
| Gene | >Ani_SJS72_1|g1374.t1 ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAGTAAGTCGTGTCAT ATTCTCTACTTCTGCATGGAACAATTATTGACGGAGGAAAATCAGCCGGATGCATACATCTATTTTTTGAAAGCT ACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCTTT CTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAGCAGTTACCGCTGTAAGTCCTTATATCC AACACCCTGACACCTAATCAACTCATCATCAACTAACTTGTATAGTTTTGCTGGGGCCCGCTCGCATTCCTCATT GCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGA GATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTAC TATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGCTGCTGGTTCTTGTGAGTTTATCAATACCTTG CTGAGTGGGAACTGTGATTGCTAATCATATTGCAGATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTAT GAAAAAGTTAAGCGCAATGGATCGGAAGCGGAAGGACTGTTAG |