Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1338.t1
Gene name
Locationscaffold_006:210112..210990
Strand+
Gene length (bp)878
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 1.1E-46 26 241

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 71 93 22
3 106 128 22
4 202 219 17
5 226 248 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1338.t1
MEDGKGASPMVSYVRAEINVKYADILLLACCFCSGLLDSTMYNAYNTFVSMQTGNTIFVGLGASKQDSRPYDWAR
SLTAIGCYAIGSFIFSRINNFLGPKRRGTLVACFLLQVVLVIIAAALSQSHVIAGDLADAHSSTYITHWSQEAVI
VLLSMQSAGQTVASRVLGYNEVPTVVITSLLCDLMMDPKLFLLRNEKRDRRVIAFILTLLGAIAGGGISKATGNI
WAALWIIGGLKFFMAVALSFWHVK*
Coding >Ani_SJS72_1|g1338.t1
ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC
TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC
ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGA
TCCTTGACGGCCATCGGCTGTTATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA
CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGC
CATGTCATCGCCGGTGACTTAGCCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC
GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTG
GTGATCACCAGTTTGCTGTGCGATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT
CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATC
TGGGCAGCTCTGTGGATCATCGGAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA
Transcript >Ani_SJS72_1|g1338.t1
ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC
TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC
ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGA
TCCTTGACGGCCATCGGCTGTTATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA
CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGC
CATGTCATCGCCGGTGACTTAGCCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC
GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTG
GTGATCACCAGTTTGCTGTGCGATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT
CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATC
TGGGCAGCTCTGTGGATCATCGGAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA
Gene >Ani_SJS72_1|g1338.t1
ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC
TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGGTGAGTCACTCTCACTCTCT
CCACTCCACCCTTTCCTCCACACCTTTCCTTTCTTTCTCTTACCCCATCACAATCTCCATAAAATCCCCATAATT
CATAATGGAAGCTTACTTACACTCTCCCCACAGCCTACAACACTTTCGTTTCCATGCAAACGGGAAACACCATTT
TCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGATCCTTGACGGCCATCGGCTGTT
ATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAACGGCGCGGCACTCTGGTCGCCT
GTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGCCATGTCATCGCCGGTGACTTAG
CCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATCGTCCTGCTCAGTATGCAGTCCG
CGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTGGTGATCACCAGTTTGCTGTGCG
ATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGTCGTGTCATCGCCTTCATCCTGA
CCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATCTGGGCAGCTCTGTGGATCATCG
GAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail