Protein ID | Ani_SJS72_1|g1338.t1 |
Gene name | |
Location | scaffold_006:210112..210990 |
Strand | + |
Gene length (bp) | 878 |
Transcript length (bp) | 750 |
Coding sequence length (bp) | 750 |
Protein length (aa) | 250 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 1.1E-46 | 26 | 241 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 71 | 93 | 22 |
3 | 106 | 128 | 22 |
4 | 202 | 219 | 17 |
5 | 226 | 248 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g1338.t1 MEDGKGASPMVSYVRAEINVKYADILLLACCFCSGLLDSTMYNAYNTFVSMQTGNTIFVGLGASKQDSRPYDWAR SLTAIGCYAIGSFIFSRINNFLGPKRRGTLVACFLLQVVLVIIAAALSQSHVIAGDLADAHSSTYITHWSQEAVI VLLSMQSAGQTVASRVLGYNEVPTVVITSLLCDLMMDPKLFLLRNEKRDRRVIAFILTLLGAIAGGGISKATGNI WAALWIIGGLKFFMAVALSFWHVK* |
Coding | >Ani_SJS72_1|g1338.t1 ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGA TCCTTGACGGCCATCGGCTGTTATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGC CATGTCATCGCCGGTGACTTAGCCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTG GTGATCACCAGTTTGCTGTGCGATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATC TGGGCAGCTCTGTGGATCATCGGAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA |
Transcript | >Ani_SJS72_1|g1338.t1 ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGCCTACAACACTTTCGTTTCC ATGCAAACGGGAAACACCATTTTCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGA TCCTTGACGGCCATCGGCTGTTATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAA CGGCGCGGCACTCTGGTCGCCTGTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGC CATGTCATCGCCGGTGACTTAGCCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATC GTCCTGCTCAGTATGCAGTCCGCGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTG GTGATCACCAGTTTGCTGTGCGATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGT CGTGTCATCGCCTTCATCCTGACCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATC TGGGCAGCTCTGTGGATCATCGGAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA |
Gene | >Ani_SJS72_1|g1338.t1 ATGGAGGACGGTAAAGGTGCTAGCCCGATGGTTAGCTATGTTAGGGCTGAGATCAATGTCAAATATGCCGATATC TTATTGCTCGCCTGTTGTTTCTGTTCGGGGTTGCTGGACAGCACCATGTACAATGGTGAGTCACTCTCACTCTCT CCACTCCACCCTTTCCTCCACACCTTTCCTTTCTTTCTCTTACCCCATCACAATCTCCATAAAATCCCCATAATT CATAATGGAAGCTTACTTACACTCTCCCCACAGCCTACAACACTTTCGTTTCCATGCAAACGGGAAACACCATTT TCGTGGGTTTGGGTGCCTCGAAGCAGGATAGCCGACCGTACGACTGGGCGCGATCCTTGACGGCCATCGGCTGTT ATGCGATCGGCAGCTTCATCTTCTCCCGCATCAACAACTTTCTCGGTCCCAAACGGCGCGGCACTCTGGTCGCCT GTTTTCTGCTGCAGGTCGTGCTTGTCATCATCGCAGCTGCCCTCTCTCAAAGCCATGTCATCGCCGGTGACTTAG CCGACGCCCACTCCTCCACATACATCACCCACTGGAGCCAAGAGGCCGTCATCGTCCTGCTCAGTATGCAGTCCG CGGGCCAGACCGTCGCCAGTCGTGTGCTGGGCTACAACGAAGTGCCGACCGTGGTGATCACCAGTTTGCTGTGCG ATCTGATGATGGATCCCAAGCTGTTTCTGCTGCGCAATGAGAAGCGCGACCGTCGTGTCATCGCCTTCATCCTGA CCCTGTTGGGCGCCATTGCCGGTGGAGGCATCAGCAAAGCCACGGGCAACATCTGGGCAGCTCTGTGGATCATCG GAGGTCTCAAGTTCTTCATGGCCGTTGCGTTGTCCTTCTGGCACGTCAAATAA |