© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1290.t1 |
| Gene name | |
| Location | scaffold_006:63406..65246 |
| Strand | + |
| Gene length (bp) | 1840 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.1E-66 | 55 | 505 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.6E-09 | 59 | 346 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 124 | 146 | 22 |
| 3 | 153 | 175 | 22 |
| 4 | 185 | 207 | 22 |
| 5 | 220 | 239 | 19 |
| 6 | 343 | 365 | 22 |
| 7 | 372 | 394 | 22 |
| 8 | 409 | 431 | 22 |
| 9 | 438 | 460 | 22 |
| 10 | 470 | 488 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1290.t1 MSTDLKSESSHLEVVDQQPRQPDSGILGIHDPANQHGRSTWQALRANPIVIPFCLYGNIGALMYGFDNLVLSLAL SMTAFEQTFGTLTNGSYVIPAYWQSLWNALSQVATMLGSTAAGPIQDMFGRRAAFLVAACLSAAGIAVVYTASTP GAFLAGKIVNGLSLGLALTTGQTYISEITSLEVRGIALSGYTFCMNLGYLIAASVALPRMSMSSDAAYKVLFASG WVWPGVILLFLPFMPESPYFLVMKGQREKAGRMLSRLGNHASETPLILADIVRTHEEEQQRNEAAKEASFLECFK GVNWRRTRIILYCNALSQVIGSSFMTNGPYFLVQAGMSSAKTGMMTEIGIAFGIASSLVTGYVMTVCGRRALVMF GIGLSTMLFTVMGIAGCFPHSSPALWVVGIFLELSWWVYGPAIGPAMAIAGEVSSVRLRAKSLAIGFTFNYFFST VWNVVMPYLYNSDEADLGGLIGWIFAGMGAVTLLILFFELPETKGRSFEELDEMFAAGVPTRQFQRYQCEVGQGY GGKVVHDGED* |
| Coding | >Ani_SJS72_1|g1290.t1 ATGTCCACCGACCTAAAATCGGAGTCGAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGACAGTGGA ATACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGACGTGGCAAGCACTCCGGGCGAATCCTATTGTG ATCCCCTTCTGCCTGTATGGCAATATCGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCTGGCTCTG TCAATGACTGCTTTTGAACAGACATTTGGTACCCTCACAAACGGTTCTTACGTGATCCCCGCATACTGGCAGTCC CTGTGGAACGCCCTGTCCCAAGTCGCCACGATGCTCGGATCAACAGCCGCAGGTCCCATCCAGGATATGTTTGGA CGTCGAGCAGCCTTCCTCGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTACACGGCTTCGACTCCG GGCGCGTTTCTTGCCGGAAAGATCGTCAATGGCTTGTCGTTGGGTCTGGCTCTGACCACGGGGCAGACGTATATT TCGGAGATCACCTCGCTTGAGGTGCGAGGTATCGCTCTTTCGGGGTATACGTTCTGCATGAACCTTGGTTATCTC ATCGCCGCATCTGTGGCTCTTCCGCGCATGTCAATGTCCAGCGATGCAGCATACAAGGTCCTCTTCGCCTCCGGC TGGGTCTGGCCCGGAGTCATTCTCCTCTTCCTCCCATTCATGCCCGAATCCCCGTACTTCCTAGTCATGAAAGGC CAGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAACCATGCCTCCGAGACGCCGCTCATTCTCGCAGAC ATCGTCCGCACACACGAGGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTTCCTGGAATGCTTCAAG GGAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAATGCGCTATCGCAGGTCATCGGGTCCAGCTTCATG ACCAATGGGCCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACGGGGATGATGACGGAGATTGGTATT GCGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATGACAGTTTGTGGGAGACGGGCGCTGGTCATGTTC GGCATTGGGCTCTCGACGATGCTGTTCACGGTCATGGGGATAGCGGGGTGTTTCCCACATTCGAGTCCGGCGTTA TGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGGTCTACGGCCCCGCCATCGGCCCAGCCATGGCCATTGCA GGTGAAGTTTCATCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTATTTCTTCTCGACG GTATGGAACGTGGTGATGCCGTATCTGTATAACAGTGACGAGGCGGATCTGGGGGGTTTGATCGGGTGGATCTTT GCGGGCATGGGGGCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAGGAGCTTTGAGGAG CTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCAGGGGTAT GGGGGGAAGGTGGTGCATGATGGCGAGGATTAG |
| Transcript | >Ani_SJS72_1|g1290.t1 ATGTCCACCGACCTAAAATCGGAGTCGAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGACAGTGGA ATACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGACGTGGCAAGCACTCCGGGCGAATCCTATTGTG ATCCCCTTCTGCCTGTATGGCAATATCGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCTGGCTCTG TCAATGACTGCTTTTGAACAGACATTTGGTACCCTCACAAACGGTTCTTACGTGATCCCCGCATACTGGCAGTCC CTGTGGAACGCCCTGTCCCAAGTCGCCACGATGCTCGGATCAACAGCCGCAGGTCCCATCCAGGATATGTTTGGA CGTCGAGCAGCCTTCCTCGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTACACGGCTTCGACTCCG GGCGCGTTTCTTGCCGGAAAGATCGTCAATGGCTTGTCGTTGGGTCTGGCTCTGACCACGGGGCAGACGTATATT TCGGAGATCACCTCGCTTGAGGTGCGAGGTATCGCTCTTTCGGGGTATACGTTCTGCATGAACCTTGGTTATCTC ATCGCCGCATCTGTGGCTCTTCCGCGCATGTCAATGTCCAGCGATGCAGCATACAAGGTCCTCTTCGCCTCCGGC TGGGTCTGGCCCGGAGTCATTCTCCTCTTCCTCCCATTCATGCCCGAATCCCCGTACTTCCTAGTCATGAAAGGC CAGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAACCATGCCTCCGAGACGCCGCTCATTCTCGCAGAC ATCGTCCGCACACACGAGGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAAGCCAGCTTCCTGGAATGCTTCAAG GGAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAATGCGCTATCGCAGGTCATCGGGTCCAGCTTCATG ACCAATGGGCCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACGGGGATGATGACGGAGATTGGTATT GCGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATGACAGTTTGTGGGAGACGGGCGCTGGTCATGTTC GGCATTGGGCTCTCGACGATGCTGTTCACGGTCATGGGGATAGCGGGGTGTTTCCCACATTCGAGTCCGGCGTTA TGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGGTCTACGGCCCCGCCATCGGCCCAGCCATGGCCATTGCA GGTGAAGTTTCATCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTATTTCTTCTCGACG GTATGGAACGTGGTGATGCCGTATCTGTATAACAGTGACGAGGCGGATCTGGGGGGTTTGATCGGGTGGATCTTT GCGGGCATGGGGGCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAGGAGCTTTGAGGAG CTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCAGGGGTAT GGGGGGAAGGTGGTGCATGATGGCGAGGATTAG |
| Gene | >Ani_SJS72_1|g1290.t1 ATGTCCACCGACCTAAAATCGGAGTCGAGCCATCTCGAGGTGGTGGACCAGCAGCCCCGTCAACCAGACAGTGGA ATACTGGGGATCCACGACCCAGCTAACCAGCATGGCCGTTCGACGTGGCAAGCACTCCGGGCGAATCCTATTGTG ATCCCCTTCTGCCTGTATGGCAATATCGGGGCTTTGATGTACGGCTTCGATAATCTAGTCCTGTCGCTGGCTCTG TCAATGACTGCTTTTGAGTGAGTACGGACGACCTAGCCTCTGGTGTGGATCTGTCGTAACTCACAATATGAATAA CAGACAGACATTTGGTACCCTCACAAACGGTTCTTACGTGATCCCCGCATACTGGCAGTCCCTGTGGAACGCCCT GTCCCAAGTCGCCACGATGCTCGGATCAACAGCCGCAGGTCCCATCCAGGATATGTTTGGACGTCGAGCAGCCTT CCTCGTGGCGGCATGTCTGTCTGCTGCCGGTATTGCAGTCGTGTACACGGCTTCGACTCCGGGCGCGTTTCTTGC CGGAAAGATCGTCAATGGCTTGTCGTTGGGTCTGGCTCTGACCACGGGGCAGACGTATATTTCGGAGATCACCTC GCTTGAGGTGCGAGGTATCGCTCTTTCGGGGTATACGTTCTGCATGGTACGTTTGTTCGAGTCAATTAGTAAGTG ACGGTGGTATTGACAATGATTTCGCAGAACCTTGGTTATCTCATCGCCGCATCTGTGGCTCTTCCGCGCATGTCA ATGTCCAGCGATGCAGCATACAAGGTATGGATAAAACAATCTGCTTCAGATTACCCTCAGAAACTGACAATCCAG GTCCTCTTCGCCTCCGGCTGGGTCTGGCCCGGAGTCATTCTCCTCTTCCTCCCATTCATGCCCGAATCCCCGTAC TTCCTAGTCATGAAAGGCCAGCGCGAAAAGGCTGGCCGCATGCTATCCCGACTGGGCAACCATGCCTCCGAGACG CCGCTCATTCTCGCAGACATCGTCCGCACACACGAGGAAGAGCAACAGCGCAACGAAGCAGCCAAGGAAGCCAGC TTCCTGGAATGCTTCAAGGGAGTTAATTGGCGACGCACGCGGATCATCCTCTACTGCAATGCGCTATCGCAGGTC ATCGGGTCCAGCTTCATGACCAATGGGCCGTACTTCCTCGTGCAGGCGGGCATGTCCTCTGCCAAGACGGGGATG ATGACGGAGATTGGTATTGCGTTTGGGATTGCCAGTTCGCTAGTCACAGGATATGTAATGACAGTTTGTGGGAGA CGGGCGCTGGTCATGTTCGGCATTGGGCTCTCGACGATGCTGTTCACGGTCATGGGGATAGCGGGGTGTTTCCCA CATTCGAGTCCGGCGTTATGGTGAGCCCTTCTTCCCCTAATCGCCACTTCATCCTTTGATACCTTTCTAACAATG ATATTTCAGGGTGGTCGGCATCTTCCTCGAGCTCTCCTGGTGGGTCTACGGCCCCGCCATCGGCCCAGCCATGGC CATTGCAGGTGAAGTTTCATCGGTACGACTACGTGCTAAGTCACTGGCCATCGGGTTTACGTTCAACTATTTCTT CTCGACGGTATGGAACGTGGTGATGCCGTATCTGTATAACAGTGACGAGGCGGATCTGGGGGGTTTGATCGGGTG GATCTTTGCGGGCATGGGGGCTGTCACGCTGTTGATTCTGTTCTTTGAACTTCCTGAGACCAAGGGGAGGAGCTT TGAGGAGCTGGATGAGATGTTTGCAGCGGGGGTGCCGACGAGGCAGTTTCAGCGGTATCAATGCGAGGTGGGGCA GGGGTATGGGGGGAAGGTGGTGCATGATGGCGAGGATTAG |