Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1282.t1
Gene name
Locationscaffold_006:42937..43334
Strand-
Gene length (bp)397
Transcript length (bp)345
Coding sequence length (bp)345
Protein length (aa) 115

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1282.t1
MQFKILALPSLVATAAATLDIAFSGYYYADCVSPSIEAANVISGACGPNNGLPLQSFSARIYSGSCDAGTSPVLK
LYTATGCTEESLYGEYNVTSDTQCFAVDGTFLSNEVVCE*
Coding >Ani_SJS72_1|g1282.t1
ATGCAGTTCAAGATCCTTGCCCTTCCGTCCCTTGTGGCCACTGCAGCTGCCACCTTGGACATCGCCTTCAGCGGC
TACTACTATGCCGACTGCGTCTCCCCCAGCATTGAGGCTGCCAACGTGATCTCTGGTGCCTGTGGACCAAACAAC
GGCCTCCCTCTCCAGTCTTTCTCGGCGCGCATCTACTCCGGCTCCTGCGATGCTGGCACATCGCCCGTTTTGAAG
CTTTACACCGCCACGGGCTGTACTGAAGAATCACTGTACGGCGAATACAACGTTACCAGCGATACCCAGTGCTTC
GCGGTGGATGGAACATTCTTGAGCAATGAAGTTGTTTGCGAGTAG
Transcript >Ani_SJS72_1|g1282.t1
ATGCAGTTCAAGATCCTTGCCCTTCCGTCCCTTGTGGCCACTGCAGCTGCCACCTTGGACATCGCCTTCAGCGGC
TACTACTATGCCGACTGCGTCTCCCCCAGCATTGAGGCTGCCAACGTGATCTCTGGTGCCTGTGGACCAAACAAC
GGCCTCCCTCTCCAGTCTTTCTCGGCGCGCATCTACTCCGGCTCCTGCGATGCTGGCACATCGCCCGTTTTGAAG
CTTTACACCGCCACGGGCTGTACTGAAGAATCACTGTACGGCGAATACAACGTTACCAGCGATACCCAGTGCTTC
GCGGTGGATGGAACATTCTTGAGCAATGAAGTTGTTTGCGAGTAG
Gene >Ani_SJS72_1|g1282.t1
ATGCAGTTCAAGGTTGATCACATCTCGTCCGTTGCACTCTTAAGACCCATTCTGACCATACTAGATCCTTGCCCT
TCCGTCCCTTGTGGCCACTGCAGCTGCCACCTTGGACATCGCCTTCAGCGGCTACTACTATGCCGACTGCGTCTC
CCCCAGCATTGAGGCTGCCAACGTGATCTCTGGTGCCTGTGGACCAAACAACGGCCTCCCTCTCCAGTCTTTCTC
GGCGCGCATCTACTCCGGCTCCTGCGATGCTGGCACATCGCCCGTTTTGAAGCTTTACACCGCCACGGGCTGTAC
TGAAGAATCACTGTACGGCGAATACAACGTTACCAGCGATACCCAGTGCTTCGCGGTGGATGGAACATTCTTGAG
CAATGAAGTTGTTTGCGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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