© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1275.t1 |
| Gene name | |
| Location | scaffold_006:25112..26130 |
| Strand | - |
| Gene length (bp) | 1018 |
| Transcript length (bp) | 963 |
| Coding sequence length (bp) | 963 |
| Protein length (aa) | 321 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01040 | UbiA | UbiA prenyltransferase family | 3.5E-41 | 39 | 289 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 124 | 146 | 22 |
| 2 | 156 | 178 | 22 |
| 3 | 185 | 207 | 22 |
| 4 | 222 | 244 | 22 |
| 5 | 256 | 275 | 19 |
| 6 | 295 | 312 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1275.t1 MSTTKRSVTTRPSTSSRNVPRGIWELARLHTRESWLCWYPSIWGACVAAGVSDTVLEPLAFARFLFGIWASVTAT HCAFCTFNDICDQSLDKHVQRCKVRPLPSGMISTPEALLAFVCWVPFTFAITWATLGPAVTVSFIPVWVLSVIYP FMKRLMPFPQVVLGAIIGGAVFPGWVGVTGDLDHLDQALPLFFATAAWVVYFDVFYATQDLPDDKKAGVKSLAVW MGPNVKILLAGLGILQIAFFAMTALRADLSLIFWILGIGVWAVSVPWHVLSLNLKDRHSGGSVFKANIKLGLYMT GVSLLELVLLRVHHAPMKVY* |
| Coding | >Ani_SJS72_1|g1275.t1 ATGTCTACTACTAAGCGCTCGGTAACTACGAGGCCGTCCACTTCGTCACGGAACGTGCCACGCGGCATCTGGGAG CTAGCCCGATTGCATACTCGCGAATCCTGGCTATGCTGGTATCCATCTATCTGGGGAGCGTGTGTAGCCGCAGGT GTATCAGACACCGTGCTAGAGCCGCTGGCTTTCGCCAGGTTCCTGTTCGGCATCTGGGCCAGCGTAACCGCCACT CATTGTGCCTTTTGCACCTTCAATGACATTTGTGACCAGAGCTTGGATAAGCACGTCCAGCGTTGCAAGGTGCGC CCTCTCCCATCCGGAATGATTAGCACGCCAGAAGCCTTGCTTGCCTTTGTTTGTTGGGTGCCCTTTACGTTCGCT ATTACCTGGGCTACTCTGGGCCCGGCTGTGACAGTGAGCTTCATTCCCGTCTGGGTATTGAGTGTGATCTACCCC TTCATGAAGCGCCTTATGCCCTTTCCACAAGTTGTTCTTGGGGCAATCATCGGAGGCGCAGTGTTCCCAGGTTGG GTGGGAGTTACCGGGGATCTGGATCATCTCGACCAGGCGTTGCCGCTATTTTTCGCTACAGCCGCATGGGTTGTC TACTTTGACGTTTTCTATGCGACGCAAGACCTGCCGGACGACAAGAAGGCTGGCGTCAAATCGCTCGCGGTCTGG ATGGGACCCAATGTCAAGATCCTCCTCGCGGGGCTCGGAATCCTACAGATTGCCTTCTTCGCCATGACAGCACTG CGGGCCGATCTTTCCCTCATCTTCTGGATACTGGGAATTGGAGTGTGGGCCGTCAGTGTGCCATGGCATGTCCTG TCCTTGAACCTCAAGGACCGACACTCCGGCGGATCGGTCTTCAAAGCGAATATCAAACTAGGATTGTATATGACG GGAGTCTCTTTATTGGAACTCGTTCTGTTGAGGGTGCATCACGCACCCATGAAAGTATACTAG |
| Transcript | >Ani_SJS72_1|g1275.t1 ATGTCTACTACTAAGCGCTCGGTAACTACGAGGCCGTCCACTTCGTCACGGAACGTGCCACGCGGCATCTGGGAG CTAGCCCGATTGCATACTCGCGAATCCTGGCTATGCTGGTATCCATCTATCTGGGGAGCGTGTGTAGCCGCAGGT GTATCAGACACCGTGCTAGAGCCGCTGGCTTTCGCCAGGTTCCTGTTCGGCATCTGGGCCAGCGTAACCGCCACT CATTGTGCCTTTTGCACCTTCAATGACATTTGTGACCAGAGCTTGGATAAGCACGTCCAGCGTTGCAAGGTGCGC CCTCTCCCATCCGGAATGATTAGCACGCCAGAAGCCTTGCTTGCCTTTGTTTGTTGGGTGCCCTTTACGTTCGCT ATTACCTGGGCTACTCTGGGCCCGGCTGTGACAGTGAGCTTCATTCCCGTCTGGGTATTGAGTGTGATCTACCCC TTCATGAAGCGCCTTATGCCCTTTCCACAAGTTGTTCTTGGGGCAATCATCGGAGGCGCAGTGTTCCCAGGTTGG GTGGGAGTTACCGGGGATCTGGATCATCTCGACCAGGCGTTGCCGCTATTTTTCGCTACAGCCGCATGGGTTGTC TACTTTGACGTTTTCTATGCGACGCAAGACCTGCCGGACGACAAGAAGGCTGGCGTCAAATCGCTCGCGGTCTGG ATGGGACCCAATGTCAAGATCCTCCTCGCGGGGCTCGGAATCCTACAGATTGCCTTCTTCGCCATGACAGCACTG CGGGCCGATCTTTCCCTCATCTTCTGGATACTGGGAATTGGAGTGTGGGCCGTCAGTGTGCCATGGCATGTCCTG TCCTTGAACCTCAAGGACCGACACTCCGGCGGATCGGTCTTCAAAGCGAATATCAAACTAGGATTGTATATGACG GGAGTCTCTTTATTGGAACTCGTTCTGTTGAGGGTGCATCACGCACCCATGAAAGTATACTAG |
| Gene | >Ani_SJS72_1|g1275.t1 ATGTCTACTACTAAGCGCTCGGTAACTACGAGGCCGTCCACTTCGTCACGGAACGTGCCACGCGGCATCTGGGAG CTAGCCCGATTGCATACTCGCGAATCCTGGCTATGCTGGTATCCATCTATCTGGGGAGCGTGTGTAGCCGCAGGT GTATCAGACACCGTGCTAGAGCCGCTGGCTTTCGCCAGGTTCCTGTTCGGCATCTGGGCCAGCGTAACCGCCACT CATTGTGCCTTTTGCACCTTCAAGTCTGTACCATTTTGCTTTTTTGTTGTTCCCCGGTACTCCTCTGACTACTGG CAGTGACATTTGTGACCAGAGCTTGGATAAGCACGTCCAGCGTTGCAAGGTGCGCCCTCTCCCATCCGGAATGAT TAGCACGCCAGAAGCCTTGCTTGCCTTTGTTTGTTGGGTGCCCTTTACGTTCGCTATTACCTGGGCTACTCTGGG CCCGGCTGTGACAGTGAGCTTCATTCCCGTCTGGGTATTGAGTGTGATCTACCCCTTCATGAAGCGCCTTATGCC CTTTCCACAAGTTGTTCTTGGGGCAATCATCGGAGGCGCAGTGTTCCCAGGTTGGGTGGGAGTTACCGGGGATCT GGATCATCTCGACCAGGCGTTGCCGCTATTTTTCGCTACAGCCGCATGGGTTGTCTACTTTGACGTTTTCTATGC GACGCAAGACCTGCCGGACGACAAGAAGGCTGGCGTCAAATCGCTCGCGGTCTGGATGGGACCCAATGTCAAGAT CCTCCTCGCGGGGCTCGGAATCCTACAGATTGCCTTCTTCGCCATGACAGCACTGCGGGCCGATCTTTCCCTCAT CTTCTGGATACTGGGAATTGGAGTGTGGGCCGTCAGTGTGCCATGGCATGTCCTGTCCTTGAACCTCAAGGACCG ACACTCCGGCGGATCGGTCTTCAAAGCGAATATCAAACTAGGATTGTATATGACGGGAGTCTCTTTATTGGAACT CGTTCTGTTGAGGGTGCATCACGCACCCATGAAAGTATACTAG |