Protein ID | Ani_SJS72_1|g126.t1 |
Gene name | |
Location | scaffold_001:368315..370738 |
Strand | + |
Gene length (bp) | 2423 |
Transcript length (bp) | 2178 |
Coding sequence length (bp) | 2178 |
Protein length (aa) | 726 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06011 | TRP | Transient receptor potential (TRP) ion channel | 5.1E-154 | 167 | 594 |
PF14558 | TRP_N | ML-like domain | 5.5E-42 | 26 | 162 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 166 | 188 | 22 |
2 | 321 | 343 | 22 |
3 | 369 | 391 | 22 |
4 | 401 | 423 | 22 |
5 | 457 | 479 | 22 |
6 | 483 | 505 | 22 |
7 | 518 | 537 | 19 |
8 | 547 | 569 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g126.t1 MRWSTCLTSALLASTAPLAAATRLIESNALNICQDSNNFTATYFSVRFTPENRSLVLSFDGVAAISGKVTADLSV DVYGYQLTGETLDPCKMNIEGLCPMSAGAINVQNAPVTIPEDVVRRIPGIAYTVPDLDATVRVYINSTDTGTSIT CLEATLSNGKTVYQKGVGWTTAVISGVGLIASAVAAGLGNSNTAAHVAANVLAFFSFMQSQAMFGMISVHMPPIV EAWTQNMQWSMGIIHVKFLDTICTWYQRATGGTPSTVLSELSTTSVEVLKRKRSFDGVTNVFKRQYAQSETATTG TTVVRGIDRVGFRAGIEGTNIFLTGFIFFVFFVAVVMIIVAMLKVGSHFLAKKGKTKTDKFGDFHVSKGILYRLI FIGFPQMCVLCLWEFTQHDSAAEVVLAVIMLVSMICTLGWAAFRVIILARRSVAMHRNPAYILYSDEACLNKLGF LYVHYRATAYYFLVFALLYIFVKAMFISLSQPAPVVQTVAMVIIETLALIGISIVRPWMDKKTNGYNIAIASINF LNSILLLFFSNVFDQPGIVTGVMGVIFFVYNAAFALILLLLVLYSAVNAIFSKNPDMRYRPMRDDRGSFAKSGSQ LITELDALGTTARGEGTPEMWNKGSLIDDTGSVASEGLHRSHQDLARDTAPGREMSETPVSQANLFPVSRGSSPV HRVASMNAAGVRRSLLSDSDTASATHPHANLYYVIFKCSKCSEQTLWTGH* |
Coding | >Ani_SJS72_1|g126.t1 ATGCGCTGGTCAACGTGTCTTACCAGCGCCCTCCTCGCGTCTACAGCACCGCTGGCCGCTGCAACCAGACTCATT GAATCAAATGCTTTGAATATCTGCCAGGATAGCAACAATTTTACTGCCACCTACTTCAGCGTCCGCTTCACGCCC GAGAATCGTTCCTTGGTTCTGAGTTTCGATGGCGTGGCCGCCATCTCCGGCAAAGTTACTGCCGATCTCTCGGTC GACGTCTATGGCTACCAGTTGACTGGTGAGACGTTGGATCCGTGTAAAATGAATATAGAGGGTCTCTGTCCGATG AGCGCCGGTGCCATTAATGTCCAGAACGCCCCGGTCACAATTCCGGAAGATGTGGTGCGCCGGATCCCGGGTATC GCATACACTGTGCCAGACCTTGATGCCACCGTTCGGGTTTACATCAACTCCACGGATACCGGCACCAGTATTACA TGTCTCGAAGCGACCTTGTCGAATGGAAAAACAGTCTACCAGAAAGGAGTCGGATGGACGACCGCGGTGATCTCC GGCGTCGGGCTTATCGCTTCAGCTGTTGCAGCTGGTCTGGGCAACTCGAACACTGCGGCCCATGTCGCCGCTAAC GTGCTGGCCTTTTTCAGCTTCATGCAATCACAGGCCATGTTTGGGATGATCTCGGTCCACATGCCGCCGATCGTG GAAGCATGGACCCAGAACATGCAATGGAGCATGGGGATCATCCATGTTAAGTTCTTGGATACCATTTGTACCTGG TACCAAAGGGCAACTGGCGGTACGCCGTCGACTGTCTTGTCCGAGCTCTCGACTACGTCTGTTGAAGTTCTGAAA CGAAAGCGATCTTTTGATGGCGTCACCAATGTGTTCAAACGACAATATGCCCAGTCGGAGACTGCCACTACCGGC ACCACAGTGGTGCGGGGAATCGATCGTGTGGGGTTCAGGGCCGGCATTGAGGGCACCAATATCTTCCTCACCGGC TTCATCTTCTTCGTCTTTTTCGTCGCCGTGGTGATGATCATCGTCGCGATGCTCAAGGTGGGAAGCCACTTTCTG GCGAAGAAAGGGAAGACCAAGACCGACAAGTTTGGCGACTTTCATGTGTCGAAAGGTATCCTCTATCGGCTCATT TTCATCGGATTTCCGCAGATGTGCGTCCTTTGTCTGTGGGAATTTACGCAGCATGATTCGGCAGCCGAAGTCGTT TTGGCGGTGATCATGTTGGTTTCCATGATCTGCACGCTGGGCTGGGCTGCCTTCCGAGTCATCATTCTCGCACGG AGGTCGGTAGCGATGCATCGCAACCCGGCCTATATCCTCTACTCAGACGAGGCATGTCTGAACAAGCTGGGGTTT TTGTATGTGCATTACCGAGCGACCGCCTACTACTTCCTCGTGTTCGCACTACTGTATATCTTCGTCAAGGCGATG TTCATCAGTCTGAGCCAGCCGGCCCCGGTGGTGCAGACGGTGGCCATGGTGATTATTGAGACCTTGGCGCTTATT GGGATCAGTATCGTGCGACCGTGGATGGACAAAAAAACCAATGGCTACAATATCGCCATCGCATCCATCAACTTT TTAAATTCCATCTTGTTGCTTTTCTTTTCCAACGTCTTCGACCAGCCCGGCATCGTGACCGGTGTGATGGGGGTC ATTTTCTTTGTGTACAATGCCGCCTTTGCGCTCATTCTGCTCCTCCTCGTTCTTTACTCCGCCGTTAACGCTATC TTCTCGAAGAATCCGGACATGCGCTATCGGCCGATGCGGGACGACCGGGGATCCTTTGCCAAGTCGGGGAGCCAG TTGATCACGGAGCTGGATGCGCTCGGCACGACTGCTCGGGGTGAGGGCACGCCGGAGATGTGGAACAAAGGCAGT TTGATCGACGACACTGGGTCTGTTGCTAGTGAGGGACTGCATCGAAGTCACCAAGATCTGGCCCGCGACACTGCT CCTGGTCGTGAGATGTCTGAGACGCCCGTCAGCCAGGCGAATTTGTTTCCCGTCAGTCGAGGGAGCAGTCCTGTT CATCGAGTAGCGTCCATGAATGCCGCAGGTGTGCGCCGCAGTCTGTTGAGTGACAGCGATACGGCATCGGCGACT CACCCGCATGCAAACCTATACTATGTGATTTTCAAATGCAGCAAATGCAGCGAACAGACCCTGTGGACTGGCCAT TAG |
Transcript | >Ani_SJS72_1|g126.t1 ATGCGCTGGTCAACGTGTCTTACCAGCGCCCTCCTCGCGTCTACAGCACCGCTGGCCGCTGCAACCAGACTCATT GAATCAAATGCTTTGAATATCTGCCAGGATAGCAACAATTTTACTGCCACCTACTTCAGCGTCCGCTTCACGCCC GAGAATCGTTCCTTGGTTCTGAGTTTCGATGGCGTGGCCGCCATCTCCGGCAAAGTTACTGCCGATCTCTCGGTC GACGTCTATGGCTACCAGTTGACTGGTGAGACGTTGGATCCGTGTAAAATGAATATAGAGGGTCTCTGTCCGATG AGCGCCGGTGCCATTAATGTCCAGAACGCCCCGGTCACAATTCCGGAAGATGTGGTGCGCCGGATCCCGGGTATC GCATACACTGTGCCAGACCTTGATGCCACCGTTCGGGTTTACATCAACTCCACGGATACCGGCACCAGTATTACA TGTCTCGAAGCGACCTTGTCGAATGGAAAAACAGTCTACCAGAAAGGAGTCGGATGGACGACCGCGGTGATCTCC GGCGTCGGGCTTATCGCTTCAGCTGTTGCAGCTGGTCTGGGCAACTCGAACACTGCGGCCCATGTCGCCGCTAAC GTGCTGGCCTTTTTCAGCTTCATGCAATCACAGGCCATGTTTGGGATGATCTCGGTCCACATGCCGCCGATCGTG GAAGCATGGACCCAGAACATGCAATGGAGCATGGGGATCATCCATGTTAAGTTCTTGGATACCATTTGTACCTGG TACCAAAGGGCAACTGGCGGTACGCCGTCGACTGTCTTGTCCGAGCTCTCGACTACGTCTGTTGAAGTTCTGAAA CGAAAGCGATCTTTTGATGGCGTCACCAATGTGTTCAAACGACAATATGCCCAGTCGGAGACTGCCACTACCGGC ACCACAGTGGTGCGGGGAATCGATCGTGTGGGGTTCAGGGCCGGCATTGAGGGCACCAATATCTTCCTCACCGGC TTCATCTTCTTCGTCTTTTTCGTCGCCGTGGTGATGATCATCGTCGCGATGCTCAAGGTGGGAAGCCACTTTCTG GCGAAGAAAGGGAAGACCAAGACCGACAAGTTTGGCGACTTTCATGTGTCGAAAGGTATCCTCTATCGGCTCATT TTCATCGGATTTCCGCAGATGTGCGTCCTTTGTCTGTGGGAATTTACGCAGCATGATTCGGCAGCCGAAGTCGTT TTGGCGGTGATCATGTTGGTTTCCATGATCTGCACGCTGGGCTGGGCTGCCTTCCGAGTCATCATTCTCGCACGG AGGTCGGTAGCGATGCATCGCAACCCGGCCTATATCCTCTACTCAGACGAGGCATGTCTGAACAAGCTGGGGTTT TTGTATGTGCATTACCGAGCGACCGCCTACTACTTCCTCGTGTTCGCACTACTGTATATCTTCGTCAAGGCGATG TTCATCAGTCTGAGCCAGCCGGCCCCGGTGGTGCAGACGGTGGCCATGGTGATTATTGAGACCTTGGCGCTTATT GGGATCAGTATCGTGCGACCGTGGATGGACAAAAAAACCAATGGCTACAATATCGCCATCGCATCCATCAACTTT TTAAATTCCATCTTGTTGCTTTTCTTTTCCAACGTCTTCGACCAGCCCGGCATCGTGACCGGTGTGATGGGGGTC ATTTTCTTTGTGTACAATGCCGCCTTTGCGCTCATTCTGCTCCTCCTCGTTCTTTACTCCGCCGTTAACGCTATC TTCTCGAAGAATCCGGACATGCGCTATCGGCCGATGCGGGACGACCGGGGATCCTTTGCCAAGTCGGGGAGCCAG TTGATCACGGAGCTGGATGCGCTCGGCACGACTGCTCGGGGTGAGGGCACGCCGGAGATGTGGAACAAAGGCAGT TTGATCGACGACACTGGGTCTGTTGCTAGTGAGGGACTGCATCGAAGTCACCAAGATCTGGCCCGCGACACTGCT CCTGGTCGTGAGATGTCTGAGACGCCCGTCAGCCAGGCGAATTTGTTTCCCGTCAGTCGAGGGAGCAGTCCTGTT CATCGAGTAGCGTCCATGAATGCCGCAGGTGTGCGCCGCAGTCTGTTGAGTGACAGCGATACGGCATCGGCGACT CACCCGCATGCAAACCTATACTATGTGATTTTCAAATGCAGCAAATGCAGCGAACAGACCCTGTGGACTGGCCAT TAG |
Gene | >Ani_SJS72_1|g126.t1 ATGCGCTGGTCAACGTGTCTTACCAGCGCCCTCCTCGCGTCTACAGCACCGCTGGCCGCTGCAACCAGACTCATT GAATCAAATGCTTTGAATATCTGCCAGGATAGCAACAATTTTACTGCCACCTACTTCAGCGTCCGCTTCACGCCC GAGAATCGTTCCTTGGTTCTGAGTTTCGATGGCGTGGCCGCCATCTCCGGCAAAGTTACTGCCGATCTCTCGGTC GACGTCTATGGCTACCAGTTGACTGGTGAGACGTTGGATCCGTGTAAAATGAATATAGAGGGTCTCTGTCCGATG AGCGCCGGTGCCATTAATGTCCAGAACGCCCCGGTCACAATTCCGGAAGATGTGGTGCGCCGGATCCCGGGTCTG TAGTATCCCGCGCATTGATTGTCTAATAGTATTAACAATATTCTAGGTATCGCATACACTGTGCCAGACCTTGAT GCCACCGTTCGGGTTTACATCAACTCCACGGATACCGGCACCAGTATTACATGTCTCGAAGCGACCTTGTCGAAT GGAAAAACAGTCTACCAGAAAGGAGTCGGATGGACGACCGCGGTGATCTCCGGCGTCGGGCTTATCGCTTCAGCT GTTGCAGCTGGTCTGGGCAACTCGAACACTGCGGCCCATGTCGCCGCTAACGTGCTGGCCTTTTTCAGCTTCATG CAATCACAGGCCATGTTTGGGATGATCTCGGTCCACATGCCGCCGATCGTGGAAGCATGGACCCAGAACATGCAA TGGAGCATGGGGATCATCCATGTTAAGTTCTTGGATACCATTTGTACCTGGTACCAAAGGGCAACTGGCGGTACG CCGTCGACTGTCTTGTCCGAGCTCTCGACTACGTCTGTTGAAGTTCTGAAACGAAAGCGATCTTTTGATGGCGTC ACCAATGTGTTCAAACGACAATATGCCCAGTCGGAGACTGCCACTACCGGCACCACAGTGGTGCGGGGAATCGAT CGTGTGGGGTTCAGGGCCGGCATTGAGGGCACCAATATCTTCCTCACCGGCTTCATCTTCTTCGTCTTTTTCGTC GCCGTGGTGATGATCATCGTCGCGATGCTCAAGGTGGGAAGCCACTTTCTGGCGAAGAAAGGGAAGACCAAGACC GACAAGTTTGGCGACTTTCATGTGTCGAAAGGTATCCTCTATCGGCTCATTTTCATCGGATTTCCGCAGATGTGC GTCCTTTGTCTGTGGGAATTTACGCAGCATGATTCGGCAGCCGAAGTCGTTTTGGCGGTGATCATGTTGGTTTCC ATGATCTGCACGCTGGGCTGGGCTGCCTTCCGAGTCATCATTCTCGCACGGAGGTCGGTAGCGATGCATCGCAAC CCGGCCTATATCCTCTACTCAGACGAGGCATGTCTGAACAAGCTGGGGTTTTTGTATGTGCATTACCGAGCGACC GCCTACTACTTCCTCGTGTTCGCACTACTGTATATCTTCGTCAAGGCGATGTTCATCAGTCTGAGCCAGCCGGCC CCGGTGGTGCAGACGGTGGCCATGGTGATTATTGAGACCTTGGCGCTTATTGGGATCAGTATCGTGCGACCGTGG ATGGACAAAAAAACCAATGGCTACAATATCGCCATCGCATCCATCAACTTTTTAAATTCCATCTTGTTGCTTTTC TTTTCCAACGTCTTCGACCAGCCCGGCATCGTGACCGGTGTGATGGGGGTCATTTTCTTTGTGTACAATGCCGCC TTTGCGCTCATTCTGCTCCTCCTCGTTCTTTACTCCGCCGTTAACGCTATCTTCTCGAAGAATCCGGACATGCGC TATCGGCCGATGCGGGACGACCGGGGATCCTTTGCCAAGTCGGGGAGCCAGTTGATCACGGAGCTGGATGCGCTC GGCACGACTGCTCGGGGTGAGGGCACGCCGGAGATGTGGAACAAAGGCAGTTTGATCGACGACACTGGGTCTGTT GCTAGTGAGGGACTGCATCGAAGTCACCAAGATCTGGCCCGCGACACTGCTCCTGGTCGTGAGATGTCTGAGACG CCCGTCAGCCAGGCGAATTTGTTTCCCGTCAGTCGAGGGAGCAGTCCTGTTCATCGAGTAGCGTCCATGAATGCC GCAGGTGTGCGCCGCAGTCTGTTGAGTGACAGCGATACGGCATCGGCGACTCACCCGCATGCAAACCTATAGTGG ATTTCCGATGAATAGGAGGTAGCAACTGAGGCGTTATTATGATGTTAAATGTATCTAAGTTATATCTTGCGCTTT CTAAATTTATTTCATGGTCTGGTTCCAAGCTATGTGATTTTGTAAGTGCTCTCTGCCTCTGCATGGGAATAGTCG GGTGCAGTGGATCTTCAGCGGCGGGCTAACCCGACCCCCGTGGGGAATGCAGCAAATGCAGCAAATGCAGCGAAC AGACCCTGTGGACTGGCCATTAG |