Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g1257.t1
Gene name
Location	scaffold_005:684365..685219
Strand	-
Gene length (bp)	854
Transcript length (bp)	666
Coding sequence length (bp)	666
Protein length (aa)	222

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	48	70	22
3	90	112	22
4	125	147	22
5	178	200	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g1257.t1 MAIYGGAAPSLAGSVIMLTTLALLTYGLRIYCRVTRKSWSVEDWIMTAALVPFAVLVAGCLGGAFNGIGIRDSRL AEPQNVKYQAEGQKFFLIFEVGYCSAIIPIKLSISWMLIRVAEGRKAYLYAQYVVIVVFVLMNIIALIFILINCI PVDAAWNTELLKQGGHCQPSYVLADVYYACTAVNILTDWVTALMPVPLLWNVQLNRNTKISIVGLMGLGIL*
Coding	>Ani_SJS72_1\|g1257.t1 ATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTTGACT TATGGCCTGCGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGGCTGCATTG GTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTG GCAGAGCCACAAAATGTCAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTCGGTTACTGCTCC GCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTAT GCGCAATACGTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTTTATTCTGATCAACTGCATT CCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGAT GTCTACTACGCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTACCTCTGCTCTGG AACGTCCAACTCAACCGCAACACCAAGATTTCGATTGTCGGCCTGATGGGCCTGGGTATCTTGTAA
Transcript	>Ani_SJS72_1\|g1257.t1 ATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTTGACT TATGGCCTGCGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGGCTGCATTG GTGCCATTCGCTGTGCTGGTAGCTGGATGTCTGGGGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTG GCAGAGCCACAAAATGTCAAATACCAAGCAGAAGGACAGAAGTTTTTCCTCATCTTCGAAGTCGGTTACTGCTCC GCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATCCGAGTAGCCGAGGGTCGCAAAGCGTACCTCTAT GCGCAATACGTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTTTATTCTGATCAACTGCATT CCTGTTGACGCGGCCTGGAATACGGAACTGCTCAAGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGAT GTCTACTACGCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGCCTGTACCTCTGCTCTGG AACGTCCAACTCAACCGCAACACCAAGATTTCGATTGTCGGCCTGATGGGCCTGGGTATCTTGTAA
Gene	>Ani_SJS72_1\|g1257.t1 ATGGCCATCTACGGTGGTGCAGCGCCTTCACTGGCGGGCAGTGTCATTATGTTGACGACGCTGGCATTGTTGACT TATGGCCTGCGGATTTATTGCAGGGTGACCAGGAAGTCATGGAGTGTGGAGGATTGGATCATGACGGCTGCATTG GTACGTCCAGAGGCTATCGAAGCTTTACTGGTGGCTAACTGTCGTAGGTGCCATTCGCTGTGCTGGTAGCTGGAT GTCTGGGGGGCGCATTCAATGGAATTGGCATTCGTGATTCTAGGTTGGCAGAGCCACAAAATGTCAAATACCAAG CAGAAGGACAGAAGGTAGGAACAGTGCGAGTATGTTCAGCTACATAATACTGACTCTTCAGTTTTTCCTCATCTT CGAAGTCGGTTACTGCTCCGCCATTATTCCCATCAAGCTCAGTATCAGCTGGATGTTGATCCGAGTAGCCGAGGG TCGCAAAGCGTACCTCTATGCGCAATACGTGGTGATTGTCGTCTTTGTGCTTATGAACATCATCGCATTGATCTT TATTCTGATCAACTGCATTCCTGTTGAGTACGATACCCGACCTACCTGAGGGTTACAGCCGATACTGACTTTACA GCGCGGCCTGGAATACGGAACTGCTCAAGCAAGGAGGACACTGCCAACCATCCTACGTATTGGCCGATGTCTACT ACGCCTGCACAGCCGTGAATATTCTCACCGACTGGGTGACAGCTTTGATGTGCGACTCCTTCCAGCTATTATCGA ATACCACTGACTGAAGTAGGCCTGTACCTCTGCTCTGGAACGTCCAACTCAACCGCAACACCAAGATTTCGATTG TCGGCCTGATGGGCCTGGGTATCTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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