© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1194.t1 |
| Gene name | |
| Location | scaffold_005:477494..480326 |
| Strand | - |
| Gene length (bp) | 2832 |
| Transcript length (bp) | 2562 |
| Coding sequence length (bp) | 2562 |
| Protein length (aa) | 854 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13181 | TPR_8 | Tetratricopeptide repeat | 2.5E-02 | 420 | 448 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| Orthofinder run ID | 3 |
| Orthogroup | 2290 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1194.t1 MPGTILPPRSHRQHAQMDRTSASGPDLYLIADQDTVYEQDLLRSPGSIKPWLAYIEYKQQHGTLYEQAFVMERAC RELPRSYKLWKMYLEFRTHHLKGRNATVYRAEYQKVNALFERALILLNKMPRIWEMYLSFLLQQPLVTQTRRTFD RALRALPITQHNRIWKLYKTFARSASGQTAVKIWARYMQIHPENAEEYIQLLVDMGQYTEAVKRYMEILDNPRFQ SKEGKSNFQLWTEMVDLLVSKAKQIETGPQVGIDVDAILRSGIDRFADQRGKLWAGLATYWITRGNFEKARDVFE EGITTVMTVRDFTLIFDSYVEFEESIIGSLMESAATRTDKGQSDEEADFDLDLRMMRFEQLMDRRPFLVNDVLLR QNPNNVIEWEKRVALWGDNKHEVVQTYTAAIAAINPKKAHGKFSELWVNYAKFYENGGDLDTARVIFEKAVKVPF KSVAELAETWCEWAEMELRSENFDKAVEIMAKATQAPKKSTVDYFDENLSPQQRVHKSWKLWSFYVDLVESVSSL EETKKVYERIFELRIATPQTVVNYANLLEENKYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLR DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIY ERAIAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKEMLRIK RSVQAQYNTDVNFIASQAIARSQQRTQDGGKDNTEQDGVDAEAERADAMAALERQARAPVGFVAASTGPEGGNRP TPAGQEQQPPAAPVNPDAIDLDDDMDAD* |
| Coding | >Ani_SJS72_1|g1194.t1 ATGCCAGGGACAATCCTGCCCCCGAGATCCCACCGGCAACACGCTCAGATGGACCGAACGTCGGCCTCAGGGCCG GACCTCTACCTGATTGCCGATCAGGATACTGTCTACGAGCAGGATCTCCTTCGCAGTCCCGGTAGTATCAAACCA TGGCTTGCCTACATCGAATATAAACAGCAACATGGCACGCTCTACGAGCAAGCCTTTGTTATGGAGCGTGCGTGT AGAGAACTACCGAGATCTTACAAGCTGTGGAAGATGTATCTCGAATTTCGGACACACCACCTCAAGGGCCGCAAC GCGACTGTTTATCGGGCCGAATACCAGAAAGTCAACGCGCTTTTCGAGCGTGCTCTCATCCTGCTCAACAAGATG CCGCGGATATGGGAAATGTATCTCTCCTTCCTGCTCCAGCAGCCTCTTGTCACGCAAACCCGACGGACGTTCGAT CGTGCCCTGCGAGCTCTGCCAATCACACAACACAATCGGATTTGGAAGCTCTACAAGACTTTTGCGCGTTCCGCG TCAGGACAGACGGCCGTGAAGATCTGGGCTCGATACATGCAGATTCACCCTGAGAATGCCGAGGAGTACATTCAA CTGCTCGTCGATATGGGCCAGTACACGGAGGCTGTGAAGCGGTACATGGAAATACTCGACAACCCCCGTTTCCAG TCCAAGGAAGGAAAGAGTAATTTCCAGCTATGGACGGAGATGGTGGACTTGCTGGTATCAAAGGCAAAGCAGATC GAGACTGGCCCTCAGGTAGGAATTGATGTCGACGCCATTCTGCGCAGTGGCATTGATCGGTTTGCCGACCAGAGG GGCAAGCTGTGGGCTGGTTTGGCCACTTATTGGATTACCAGAGGTAATTTCGAAAAAGCAAGAGATGTCTTCGAG GAAGGTATCACCACGGTCATGACGGTCAGAGACTTTACACTGATCTTTGACTCTTATGTCGAATTCGAGGAGTCT ATCATTGGCAGCCTGATGGAATCAGCAGCAACCCGAACTGACAAAGGACAAAGTGACGAGGAAGCAGACTTCGAC CTTGATCTGCGGATGATGCGATTTGAGCAACTCATGGATCGACGACCGTTCCTTGTTAATGATGTGCTTCTCAGG CAGAACCCGAACAATGTCATTGAGTGGGAGAAGCGAGTGGCCCTCTGGGGAGACAACAAGCACGAGGTCGTGCAA ACCTACACAGCTGCTATTGCGGCTATTAACCCCAAGAAGGCACACGGCAAATTCTCCGAACTCTGGGTCAACTAT GCCAAGTTCTACGAAAACGGAGGCGATCTGGACACGGCTAGAGTCATCTTTGAGAAGGCTGTCAAGGTTCCTTTC AAATCAGTTGCTGAACTCGCCGAGACATGGTGCGAGTGGGCGGAAATGGAACTGCGGAGCGAGAACTTCGACAAG GCCGTGGAGATCATGGCGAAGGCAACGCAAGCACCGAAGAAGTCGACTGTGGACTATTTCGACGAGAACCTGTCA CCTCAGCAACGTGTGCACAAGAGCTGGAAGTTATGGAGTTTCTATGTCGATTTGGTCGAAAGTGTCTCCTCCCTG GAGGAGACGAAGAAGGTCTACGAAAGGATTTTCGAACTGCGCATCGCTACCCCTCAAACCGTCGTCAACTATGCC AACCTCCTGGAAGAGAACAAATACTTCGAAGACTCCTTCAAGGTCTACGAACGTGGATTGGATCTCTTCAGTTAC CCAGTTGCCTTCGAGCTCTGGAACCTCTACCTGACCAAGGCAGTTGACCGGAAAATTGGAATTGAACGACTCCGC GATCTGTTCGAACAAGCCTTGGACGGATGTCCTCCCAAATTCGCCAAGCCTCTTTACTTGATGTACGGCAACCTG GAAGAGGAGCGCGGTCTGGCCAGACATGCCATGAGAATCTACGAGCGTGCTACCCGCGCCGTCTCCGACGAGGAC AGATTTGAAATGTTCGAGTTCTACATCACCAAGTCGGCTTCGAACTTCGGATTAACGTCCACGAGACCCATCTAC GAACGGGCCATTGCAGCCTTGCCCGACCAAGAAGCGAAGGAAATGTGCCTCAAGTTTGCGGAGATGGAGCGGAGA CTCGGTGAAATCGATCGGGCCCGTGCTATCTATGGGCATGCGTCGCAGTTCTGCGATCCCCGGACCAACGCGCCC TTCTGGCAGAAATGGGAGGCATTTGAAGTCCAGCACGGAAACGAGGACACCTTCAAGGAGATGCTTCGTATCAAG CGCAGTGTTCAAGCACAGTACAACACCGACGTCAACTTTATCGCTTCCCAGGCGATTGCCCGCAGCCAACAGCGG ACCCAAGATGGCGGCAAAGACAACACTGAGCAAGACGGCGTGGACGCGGAGGCGGAGCGTGCAGACGCAATGGCA GCATTGGAGCGACAGGCTCGTGCCCCCGTGGGCTTTGTCGCCGCCAGCACCGGACCAGAAGGTGGCAACCGGCCA ACTCCAGCTGGCCAGGAACAGCAGCCCCCGGCTGCTCCAGTCAACCCGGATGCGATTGACCTCGATGACGACATG GATGCTGACTAG |
| Transcript | >Ani_SJS72_1|g1194.t1 ATGCCAGGGACAATCCTGCCCCCGAGATCCCACCGGCAACACGCTCAGATGGACCGAACGTCGGCCTCAGGGCCG GACCTCTACCTGATTGCCGATCAGGATACTGTCTACGAGCAGGATCTCCTTCGCAGTCCCGGTAGTATCAAACCA TGGCTTGCCTACATCGAATATAAACAGCAACATGGCACGCTCTACGAGCAAGCCTTTGTTATGGAGCGTGCGTGT AGAGAACTACCGAGATCTTACAAGCTGTGGAAGATGTATCTCGAATTTCGGACACACCACCTCAAGGGCCGCAAC GCGACTGTTTATCGGGCCGAATACCAGAAAGTCAACGCGCTTTTCGAGCGTGCTCTCATCCTGCTCAACAAGATG CCGCGGATATGGGAAATGTATCTCTCCTTCCTGCTCCAGCAGCCTCTTGTCACGCAAACCCGACGGACGTTCGAT CGTGCCCTGCGAGCTCTGCCAATCACACAACACAATCGGATTTGGAAGCTCTACAAGACTTTTGCGCGTTCCGCG TCAGGACAGACGGCCGTGAAGATCTGGGCTCGATACATGCAGATTCACCCTGAGAATGCCGAGGAGTACATTCAA CTGCTCGTCGATATGGGCCAGTACACGGAGGCTGTGAAGCGGTACATGGAAATACTCGACAACCCCCGTTTCCAG TCCAAGGAAGGAAAGAGTAATTTCCAGCTATGGACGGAGATGGTGGACTTGCTGGTATCAAAGGCAAAGCAGATC GAGACTGGCCCTCAGGTAGGAATTGATGTCGACGCCATTCTGCGCAGTGGCATTGATCGGTTTGCCGACCAGAGG GGCAAGCTGTGGGCTGGTTTGGCCACTTATTGGATTACCAGAGGTAATTTCGAAAAAGCAAGAGATGTCTTCGAG GAAGGTATCACCACGGTCATGACGGTCAGAGACTTTACACTGATCTTTGACTCTTATGTCGAATTCGAGGAGTCT ATCATTGGCAGCCTGATGGAATCAGCAGCAACCCGAACTGACAAAGGACAAAGTGACGAGGAAGCAGACTTCGAC CTTGATCTGCGGATGATGCGATTTGAGCAACTCATGGATCGACGACCGTTCCTTGTTAATGATGTGCTTCTCAGG CAGAACCCGAACAATGTCATTGAGTGGGAGAAGCGAGTGGCCCTCTGGGGAGACAACAAGCACGAGGTCGTGCAA ACCTACACAGCTGCTATTGCGGCTATTAACCCCAAGAAGGCACACGGCAAATTCTCCGAACTCTGGGTCAACTAT GCCAAGTTCTACGAAAACGGAGGCGATCTGGACACGGCTAGAGTCATCTTTGAGAAGGCTGTCAAGGTTCCTTTC AAATCAGTTGCTGAACTCGCCGAGACATGGTGCGAGTGGGCGGAAATGGAACTGCGGAGCGAGAACTTCGACAAG GCCGTGGAGATCATGGCGAAGGCAACGCAAGCACCGAAGAAGTCGACTGTGGACTATTTCGACGAGAACCTGTCA CCTCAGCAACGTGTGCACAAGAGCTGGAAGTTATGGAGTTTCTATGTCGATTTGGTCGAAAGTGTCTCCTCCCTG GAGGAGACGAAGAAGGTCTACGAAAGGATTTTCGAACTGCGCATCGCTACCCCTCAAACCGTCGTCAACTATGCC AACCTCCTGGAAGAGAACAAATACTTCGAAGACTCCTTCAAGGTCTACGAACGTGGATTGGATCTCTTCAGTTAC CCAGTTGCCTTCGAGCTCTGGAACCTCTACCTGACCAAGGCAGTTGACCGGAAAATTGGAATTGAACGACTCCGC GATCTGTTCGAACAAGCCTTGGACGGATGTCCTCCCAAATTCGCCAAGCCTCTTTACTTGATGTACGGCAACCTG GAAGAGGAGCGCGGTCTGGCCAGACATGCCATGAGAATCTACGAGCGTGCTACCCGCGCCGTCTCCGACGAGGAC AGATTTGAAATGTTCGAGTTCTACATCACCAAGTCGGCTTCGAACTTCGGATTAACGTCCACGAGACCCATCTAC GAACGGGCCATTGCAGCCTTGCCCGACCAAGAAGCGAAGGAAATGTGCCTCAAGTTTGCGGAGATGGAGCGGAGA CTCGGTGAAATCGATCGGGCCCGTGCTATCTATGGGCATGCGTCGCAGTTCTGCGATCCCCGGACCAACGCGCCC TTCTGGCAGAAATGGGAGGCATTTGAAGTCCAGCACGGAAACGAGGACACCTTCAAGGAGATGCTTCGTATCAAG CGCAGTGTTCAAGCACAGTACAACACCGACGTCAACTTTATCGCTTCCCAGGCGATTGCCCGCAGCCAACAGCGG ACCCAAGATGGCGGCAAAGACAACACTGAGCAAGACGGCGTGGACGCGGAGGCGGAGCGTGCAGACGCAATGGCA GCATTGGAGCGACAGGCTCGTGCCCCCGTGGGCTTTGTCGCCGCCAGCACCGGACCAGAAGGTGGCAACCGGCCA ACTCCAGCTGGCCAGGAACAGCAGCCCCCGGCTGCTCCAGTCAACCCGGATGCGATTGACCTCGATGACGACATG GATGCTGACTAG |
| Gene | >Ani_SJS72_1|g1194.t1 ATGCCAGGGACAATCCTGCCCCCGAGATCCCACCGGCAACACGCTCAGATGGACCGAACGTCGGCCTCAGGGCCG GACCTCTACCTGATTGTAAGTGGGGGCGACGCACCCATTGAACTACCAGACTGATCTGGCTAACTGTGCGATGTG ATTCCAGGCCGATCAGGATACTGTCTACGAGCAGGATCTCCTTCGCAGTCCCGGTAGTATCAAACCATGGCTTGC CTACATCGAATATAAACAGCAACATGGCACGCTCTACGAGCAAGCCTTTGTACGTTTTTCCTGCCGTCGCGATGT CGTCCTCGTATGCGTGCTAATGGATTTACTCACAGGTTATGGAGCGTGCGTGTAGAGAACTACCGAGATCTTACA AGCTGTGGAAGATGGTATGGACTCTTTTCTGCCTGCGGCACCCCTCATATCACTATATTCCGTGTCACATGGTGG TGTCAGAATACAGCTGACCATAGGCAGTATCTCGAATTTCGGACACACCACCTCAAGGGCCGCAACGCGACTGTT TATCGGGCCGAATACCAGAAAGTCAACGCGCTTTTCGAGCGTGCTCTCATCCTGCTCAACAAGATGCCGCGGATA TGGGAAATGTATCTCTCCTTCCTGCTCCAGCAGCCTCTTGTCACGCAAACCCGACGGACGTTCGATCGTGCCCTG CGAGCTCTGCCAATCACACAACACAATCGGATTTGGAAGCTCTACAAGACTTTTGCGCGTTCCGCGTCAGGACAG ACGGCCGTGAAGATCTGGGCTCGATACATGCAGATTCACCCTGAGAATGCCGAGGAGTACATTCAACTGCTCGTC GATATGGGCCAGTACACGGAGGCTGTGAAGCGGTACATGGAAATACTCGACAACCCCCGTTTCCAGTCCAAGGAA GGAAAGAGTAATTTCCAGCTATGGACGGAGATGGTGGACTTGCTGGTATCAAAGGCAAAGCAGATCGAGACTGGC CCTCAGGTAGGAATTGATGTCGACGCCATTCTGCGCAGTGGCATTGATCGGTTTGCCGACCAGAGGGGCAAGCTG TGGGCTGGTTTGGCCACTTATTGGATTACCAGAGGTAATTTCGAAAAAGCAAGAGATGTCTTCGAGGAAGGTATC ACCACGGTCATGACGGTCAGAGACTTTACACTGATCTTTGACTCTTATGTCGAATTCGAGGAGTCTATCATTGGC AGCCTGATGGAATCAGCAGCAACCCGAACTGACAAAGGACAAAGTGACGAGGAAGCAGACTTCGACCTTGATCTG CGGATGATGCGATTTGAGCAACTCATGGATCGACGACCGTTCCTTGTTAATGATGTGCTTCTCAGGCAGAACCCG AACAATGTCATTGAGTGGGAGAAGCGAGTGGCCCTCTGGGGAGACAACAAGCACGAGGTCGTGCAAACCTACACA GCTGCTATTGCGGCTATTAACCCCAAGAAGGCACACGGCAAATTCTCCGAACTCTGGGTCAACTATGCCAAGTTC TACGAAAACGGAGGCGATCTGGACACGGCTAGAGTCATCTTTGAGAAGGCTGTCAAGGTTCCTTTCAAATCAGTT GCTGAACTCGCCGAGACATGGTGCGAGTGGGCGGAAATGGAACTGCGGAGCGAGAACTTCGACAAGGCCGTGGAG ATCATGGCGAAGGCAACGCAAGCACCGAAGAAGTCGACTGTGGACTATTTCGACGAGAACCTGTCACCTCAGCAA CGTGTGCACAAGAGCTGGAAGTTATGGAGTTTCTATGTCGATTTGGTCGAAAGTGTCTCCTCCCTGGAGGAGACG AAGAAGGTCTACGAAAGGATTTTCGAACTGCGCATCGCTACCCCTCAAACCGTCGTCAACTATGCCAACCTCCTG GAAGAGAACAAATACTTCGAAGACTCCTTCAAGGTCTACGAACGTGGATTGGATCTCTTCAGTTACCCAGTTGCC TTCGAGCTCTGGAACCTCTACCTGACCAAGGCAGTTGACCGGAAAATTGGAATTGAACGACTCCGCGATCTGTTC GAACAAGCCTTGGACGGATGTCCTCCCAAATTCGCCAAGCCTCTTTACTTGATGTACGGCAACCTGGAAGAGGAG CGCGGTCTGGCCAGACATGCCATGAGAATCTACGAGCGTGCTACCCGCGCCGTCTCCGACGAGGACAGATTTGAA ATGTTCGAGTTCTACATCACCAAGTCGGCTTCGAACTTCGGATTAACGTCCACGAGACCCATCTACGAACGGGCC ATTGCAGCCTTGCCCGACCAAGAAGCGAAGGAAATGTGCCTCAAGTTTGCGGAGATGGAGCGGAGACTCGGTGAA ATCGATCGGGCCCGTGCTATCTATGGGCATGCGTCGCAGTTCTGCGATCCCCGGACCAACGCGCCCTTCTGGCAG AAATGGGAGGCATTTGAAGTCCAGCACGGAAACGAGGACACCTTCAAGGAGATGCTTCGTATCAAGCGCAGTGTT CAAGCACAGTACAAGTAAGTGATTCCCTTGTGTAGCAAGCAGTCGGCTCATGACTAACCTCAAAACAGCACCGAC GTCAACTTTATCGCTTCCCAGGCGATTGCCCGCAGCCAACAGCGGACCCAAGATGGCGGCAAAGACAACACTGAG CAAGACGGCGTGGACGCGGAGGCGGAGCGTGCAGACGCAATGGCAGCATTGGAGCGACAGGCTCGTGCCCCCGTG GGCTTTGTCGCCGCCAGCACCGGACCAGAAGGTGGCAACCGGCCAACTCCAGCTGGCCAGGAACAGCAGCCCCCG GCTGCTCCAGTCAACCCGGATGCGATTGACCTCGATGACGACATGGATGCTGACTAG |