Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g1187.t1
Gene name
Locationscaffold_005:447994..448918
Strand-
Gene length (bp)924
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06293 Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 2.3E-09 128 196

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g1187.t1
MTTFSPSEVSFVKQLKNSPVSCIFRTVWHGKDCILKVYHSPQPLSVKHRSRRRDRETDPFKCESAAFMRLREHGF
CDRGHVPAFYGLIEHINPVHHLPYLQDFVEDTLYPNAILMEYVPDIHPIDLSNYSEKRLHKLQQILLEMHRAGVY
HGDLYPRNLMVQITSDRVLWMDFDRAQTFTPQSIKECHLTWLERETRMMEEFVEGLTADAKLGRIHETWICYYEG
FRPPKDEGREVLLNEEQGGI*
Coding >Ani_SJS72_1|g1187.t1
ATGACGACTTTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGTTTCTTGTATCTTTCGC
ACAGTATGGCATGGGAAAGATTGTATCTTGAAAGTGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGT
CGTCGTCGAGATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCTACGAGAACATGGCTTC
TGTGACCGAGGACATGTCCCAGCCTTCTATGGTCTGATCGAACACATCAACCCAGTTCATCATTTACCATATTTG
CAAGACTTCGTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGATATTCACCCAATTGAT
CTATCGAACTACTCCGAAAAACGACTTCATAAGCTCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTAC
CATGGGGATCTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATGGATGGATTTCGATCGC
GCGCAGACATTCACGCCCCAGTCGATTAAAGAGTGTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAA
GAATTTGTTGAGGGTCTTACAGCCGATGCTAAGCTCGGAAGGATTCATGAGACGTGGATCTGCTACTATGAAGGC
TTTAGACCCCCCAAGGATGAAGGAAGGGAGGTATTGCTAAACGAGGAACAGGGGGGAATATAG
Transcript >Ani_SJS72_1|g1187.t1
ATGACGACTTTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGTTTCTTGTATCTTTCGC
ACAGTATGGCATGGGAAAGATTGTATCTTGAAAGTGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGT
CGTCGTCGAGATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCTACGAGAACATGGCTTC
TGTGACCGAGGACATGTCCCAGCCTTCTATGGTCTGATCGAACACATCAACCCAGTTCATCATTTACCATATTTG
CAAGACTTCGTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGATATTCACCCAATTGAT
CTATCGAACTACTCCGAAAAACGACTTCATAAGCTCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTAC
CATGGGGATCTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATGGATGGATTTCGATCGC
GCGCAGACATTCACGCCCCAGTCGATTAAAGAGTGTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAA
GAATTTGTTGAGGGTCTTACAGCCGATGCTAAGCTCGGAAGGATTCATGAGACGTGGATCTGCTACTATGAAGGC
TTTAGACCCCCCAAGGATGAAGGAAGGGAGGTATTGCTAAACGAGGAACAGGGGGGAATATAG
Gene >Ani_SJS72_1|g1187.t1
ATGACGACTTTCAGCCCTTCCGAGGTCAGCTTTGTGAAGCAGCTCAAGAATTCACCAGTTTCTTGTATCTTTCGC
ACAGTATGGCATGGGAAAGATTGTATCTTGAAAGTGGTAGGTATCATGAAGCAGCCGACCGAGTCTCTTTGCGAT
GACCATTGACCTTTCCATTACACGTAGTATCACTCTCCACAGCCATTATCCGTCAAACATCGAAGTCGTCGTCGA
GATCGCGAGACCGATCCATTCAAGTGCGAAAGCGCGGCATTTATGCGTCTACGAGAACATGGCTTCTGTGACCGA
GGACATGTCCCAGCCTTCTATGGTCTGATCGAACACATCAACCCAGTTCATCATTTACCATATTTGCAAGACTTC
GTTGAGGATACCCTATATCCGAATGCTATTTTGATGGAGTATGTACCAGATATTCACCCAATTGATCTATCGAAC
TACTCCGAAAAACGACTTCATAAGCTCCAGCAGATACTGTTAGAGATGCACCGTGCTGGTGTTTACCATGGGGAT
CTATATCCTCGCAACCTGATGGTACAGATAACATCCGATCGAGTATTATGGATGGATTTCGATCGCGCGCAGACA
TTCACGCCCCAGTCGATTAAAGAGTGTCACCTGACTTGGTTGGAACGTGAGACAAGAATGATGGAAGAATTTGTT
GAGGGTCTTGTCAGTCTCTGATACATTTCCCTTCTCTTTTCCCTGTGAGTAACTAACCCAACGAGGTGCAGACAG
CCGATGCTAAGCTCGGAAGGATTCATGAGACGTGGATCTGCTACTATGAGTATGTGTATCTGGTCAAGTCCTATC
AATATTTATAGCGGACTAATGTATCGTAACAGAGGCTTTAGACCCCCCAAGGATGAAGGAAGGGAGGTATTGCTA
AACGAGGAACAGGGGGGAATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail