© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g1182.t1 |
| Gene name | |
| Location | scaffold_005:429094..431032 |
| Strand | - |
| Gene length (bp) | 1938 |
| Transcript length (bp) | 1713 |
| Coding sequence length (bp) | 1713 |
| Protein length (aa) | 571 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.2E-43 | 64 | 466 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.0E-19 | 62 | 455 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 80 | 22 |
| 2 | 95 | 117 | 22 |
| 3 | 124 | 143 | 19 |
| 4 | 153 | 175 | 22 |
| 5 | 182 | 204 | 22 |
| 6 | 214 | 233 | 19 |
| 7 | 253 | 275 | 22 |
| 8 | 279 | 301 | 22 |
| 9 | 321 | 343 | 22 |
| 10 | 358 | 377 | 19 |
| 11 | 384 | 406 | 22 |
| 12 | 416 | 438 | 22 |
| 13 | 451 | 473 | 22 |
| 14 | 527 | 549 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1182.t1 MAAPAPNEARIATKSEDEDDADSPAQAHDDQHGTSTEAGPDAPETEANPNAMHGFKLFAIFVGICFGAFLMSLDI FVIATAIPSITSDFHDTAQLAWYPAAYSLTTCALTPLAGKLSSSFPLRWIYISFFSIFMVGSFVCGFAPNSNAFI VGRAIAGIGASGVASGGFVIVLTVSPEKSKPLLLGICSSCFAMGLILAPVIGGAFTQDTTWRWCFWVNLPPGALT LLSMLFLFKPPSIQRNKTVAQRILDLDLIGCAIFVPAVFMLLLAMMWGGTKEAWNSATTIGLFVGSGVAFIIFVL WEGYKGENAMVPGNVVARRTVTFCVLFSFCHFGSVGILNYYLPEWFQVVEGASPLQSGTRVLASVLSQIVGTLFA GFLARKVHYYNPWLHIGPLFMCTAAALYTHFSAFHTPSSHWIGFQVIQGLGVGMAQQMPSLIVQHTVRDKPELMP VAISLNLFFQYLGATIMQALGGIVFRSVLYPELADHAGLNSEQIALLSAGGMADVRNTVEEYFPDLLHSVLEAYN TAITSTFYVAVGTTATAFFLAFGAKWERITDKRTTDPEGAETEHK* |
| Coding | >Ani_SJS72_1|g1182.t1 ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGCT CAGGCTCATGATGATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATATT TTCGTCATCGCAACCGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCT GCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATC TACATATCGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATT GTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCT CCCGAGAAATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTC ATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACG CTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGAC CTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACG AAGGAGGCTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTA TGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTC CTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAA GGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCT GGGTTTCTAGCACGGAAAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCA GCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCTT GGCGTCGGCATGGCTCAACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCG GTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTTT CGTTCTGTCCTATATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGT GGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAAT ACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAG TGGGAGAGGATTACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAG |
| Transcript | >Ani_SJS72_1|g1182.t1 ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGCT CAGGCTCATGATGATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATATT TTCGTCATCGCAACCGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCT GCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATC TACATATCGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATT GTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCT CCCGAGAAATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTC ATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACG CTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGAC CTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACG AAGGAGGCTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTA TGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTC CTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAA GGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCT GGGTTTCTAGCACGGAAAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCA GCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCTT GGCGTCGGCATGGCTCAACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCG GTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTTT CGTTCTGTCCTATATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGT GGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAAT ACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAG TGGGAGAGGATTACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAG |
| Gene | >Ani_SJS72_1|g1182.t1 ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGCT CAGGCTCATGATGATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATATT TTCGTCATCGCAACCGTATTACTACCAGTCCCTCGTGCTATTCCGATAAGATCCAACTGAAAATTATCTGACCCC CCGGATAGGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCTGCCTACT CGCTCACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATCTACATAT CGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATTGTCGGTC GCGCAATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCTCCCGAGA AATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTCATTGGCG GCGCTTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACGCTGCTCT CTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGACCTGGACC TCATTGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACGAAGGAGG CTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTATGGGAAG GCTATAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTCCTGTTTT CCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAAGGGGCCT CTCCATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCTGGGTTTC TAGGTATGCTTCTATACATATACTCACTCAGCCACGTCTTAGTTCTTGAAATATCCATGGATACAGAGATGCTGA CATTGAGGAATTCGTACAGCACGGAAAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGC ACCGCCGCAGCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAGTCATC CAGGGTCTTGGCGTCGGCATGGCTCAACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAA CTCATGCCGGTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTGGCGGT ATTGTGTTTCGTTCTGTCCTATATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTG TCTGCGGGTGGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTCTGGAG GCGTATAATACCGCTATTACTTCGACTTTTGTAAGTAGGCCTTCTTCTTCCGCGCTATTGTAGTGTGAGTGAGAC TAACAGACATGAGCACAATAGTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAG TGGGAGAGGATTACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAG |