© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1150.t1 |
| Gene name | |
| Location | scaffold_005:314022..316947 |
| Strand | - |
| Gene length (bp) | 2925 |
| Transcript length (bp) | 2790 |
| Coding sequence length (bp) | 2790 |
| Protein length (aa) | 930 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05362 | Lon_C | Lon protease (S16) C-terminal proteolytic domain | 2.7E-68 | 705 | 910 |
| PF02190 | LON_substr_bdg | ATP-dependent protease La (LON) substrate-binding domain | 3.8E-28 | 10 | 255 |
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 4.2E-22 | 480 | 618 |
| PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 4.4E-07 | 480 | 615 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0016887 | ATP hydrolysis activity | Yes |
| GO:0006508 | proteolysis | Yes |
| GO:0004176 | ATP-dependent peptidase activity | Yes |
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0019538 | protein metabolic process | No |
| GO:0043168 | anion binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0008233 | peptidase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0036094 | small molecule binding | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| GO:0043167 | ion binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:0003824 | catalytic activity | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0140657 | ATP-dependent activity | No |
| Orthofinder run ID | 3 |
| Orthogroup | 559 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1150.t1 MGSNSGRTTKLPLVPLPKGSVLLPGITLRIPVSNRPDLANLLSTIVDRSAVAKRDGTAITFGCVPLSSPYLSKDG QRLIDDGSLDEDRREEFDMIDAGQARKEDLFRHGTVGKVIGIQRRAYSEPALVVQGVQRFTIRRVLKERPFFEAE AVVHDEKVSGDAETVELFQQLRQLSRELLTLLRLSSLLPSPGSRLSPLIARKFELFITKSDVSHAGRLADFMADV ADSGFEEKLRILASLDVKIRLERVVEILTRQLQSIKSNVKVTTITTNSFPSSGFDINQIDPRDREILARKAMAGL SGLTPPGLSAGRNNDNDDKESNEVDELQQRLQEAQLSPEARKVADKELRRLRKMNPANAEYGVCRTYLENIADIP WTKMTEDQLGPETLKRARKQLDDDHYGLEKIKKRLLEYLAVLRLKQSTNRDVERQIESLSKELEASDGGDLEKEV PVLSETDRVAVETKLHMLKTRRMGDKSPILLLVGPPGVGKTSLARSVASSLGRKFHRISLGGVRDEAEIRGHRRT YVAAMPGLIVSGLKKVGVANPVFLLDEIDKVGGANFQGDPSAAMLEVLDPEQNHTFSDHYINIPIDLSKVLFIAT ANSLDTIPAPLLDRMETISLSGYTTVEKRHIAKRHLIPKQIRANGLSDGQVVLSDEVIDKIITSYTRESGVRNLE RELGSVCRFKAVQFADAGDAGRLDAYNPVVSMDELEEILGIERFEEEIAEKHGRPGVVTGLVAYSTGGQGSILFI EVADMPGNGRVQLTGKLGDVLKESVEVALTWVKAHAFELGLTADPTEDIMKNRSLHVHCPSGAIPKDGPSAGLAH TMGLISLFTGKAVPPSVAMTGEVSLRGKVMPVGGIKEKLIGALRAGVKTVLLPHHNRKDVKDVPQEVSEGLEIVY VTHIWEAIRQVWPDAHWPGQHTNFIESRL* |
| Coding | >Ani_SJS72_1|g1150.t1 ATGGGTTCCAACAGCGGCAGAACAACCAAGCTCCCCTTGGTCCCGCTGCCCAAAGGATCGGTCTTACTTCCTGGA ATTACGCTACGTATTCCTGTCTCGAATCGCCCGGATCTCGCCAACTTACTCTCGACAATCGTTGATCGATCAGCC GTGGCGAAGCGCGATGGAACGGCTATCACTTTCGGATGCGTTCCCCTCAGTTCACCGTATCTTAGCAAGGACGGT CAACGACTCATCGACGATGGAAGTTTGGATGAGGACCGGAGAGAGGAGTTTGATATGATTGATGCTGGACAAGCC AGAAAGGAGGATTTGTTTCGACATGGTACCGTTGGTAAAGTGATCGGTATCCAGCGCCGGGCCTATTCGGAGCCG GCTCTTGTGGTCCAGGGTGTCCAGCGGTTCACCATCAGGCGCGTCCTGAAGGAGAGGCCGTTTTTCGAGGCTGAA GCTGTTGTTCATGATGAGAAAGTCTCCGGCGATGCTGAAACAGTGGAGTTATTTCAACAGCTGCGACAACTTTCT CGCGAGCTCCTGACCTTGCTGCGACTGTCTTCGTTGCTGCCATCTCCGGGAAGCCGCCTGTCCCCACTCATTGCC CGGAAATTCGAGCTGTTCATAACCAAGTCCGATGTCTCCCATGCAGGTAGACTAGCCGATTTCATGGCGGACGTT GCTGACTCCGGCTTCGAAGAGAAGCTTCGCATATTAGCGTCGCTTGACGTCAAAATAAGGCTAGAGAGAGTTGTT GAGATCCTAACTAGGCAATTACAGAGCATTAAGAGCAATGTGAAGGTCACAACAATCACCACCAACAGCTTTCCT AGCTCTGGGTTTGATATCAATCAGATCGATCCCCGTGACCGCGAGATTCTGGCAAGGAAGGCGATGGCTGGTCTC AGCGGACTGACGCCACCCGGGTTGTCAGCCGGTCGAAACAATGACAACGATGACAAGGAATCAAACGAAGTCGAT GAGCTGCAGCAGAGACTGCAAGAGGCCCAGCTTAGCCCTGAGGCTAGAAAGGTTGCCGACAAGGAGCTGCGACGT CTTCGTAAAATGAACCCGGCAAATGCTGAGTACGGTGTCTGCCGGACCTACCTCGAGAATATTGCGGATATCCCA TGGACTAAGATGACCGAGGACCAGCTTGGACCGGAGACATTGAAGAGAGCCAGAAAACAGCTAGACGATGATCAC TACGGTTTGGAGAAGATCAAGAAGAGACTTCTTGAGTATTTGGCCGTGCTCCGACTCAAGCAGTCTACCAACAGA GATGTCGAGCGCCAGATTGAGTCCTTGTCGAAAGAGCTCGAGGCATCCGATGGAGGCGATCTTGAGAAGGAGGTA CCTGTTCTGTCCGAGACGGATCGAGTCGCTGTTGAGACAAAGCTGCACATGCTGAAGACTCGCCGCATGGGAGAC AAGTCACCCATCCTCCTGCTTGTTGGTCCACCAGGCGTTGGTAAGACCAGCTTGGCACGATCAGTGGCCTCATCG CTCGGTCGCAAGTTTCACAGAATCTCTTTGGGTGGCGTTAGAGACGAGGCTGAAATCCGAGGCCATCGGCGAACC TATGTTGCTGCGATGCCGGGACTAATCGTCAGTGGTCTCAAGAAGGTTGGCGTTGCTAATCCAGTGTTCTTGCTT GACGAGATTGACAAGGTCGGAGGCGCCAATTTCCAAGGAGACCCATCCGCAGCCATGCTTGAGGTCCTGGATCCT GAACAGAACCATACATTTTCGGATCACTACATCAACATCCCTATTGATCTGAGCAAGGTGCTTTTCATTGCCACT GCCAATTCTTTGGACACTATCCCGGCACCCCTGCTTGACCGGATGGAAACTATCTCTCTGTCTGGCTACACCACG GTTGAGAAGCGACACATTGCCAAGAGACACCTCATTCCCAAGCAAATCAGGGCGAACGGGCTTTCCGATGGTCAG GTCGTTCTGTCTGACGAAGTAATTGACAAGATTATTACGTCTTACACCAGGGAGTCGGGTGTTCGTAACCTAGAG CGTGAGCTTGGCTCGGTCTGTCGGTTCAAGGCTGTCCAGTTTGCGGATGCGGGGGATGCAGGCCGACTTGACGCG TACAACCCCGTGGTGAGCATGGACGAGTTGGAAGAAATATTAGGTATCGAGCGCTTTGAGGAAGAAATCGCCGAA AAGCATGGCCGTCCCGGTGTTGTCACTGGACTTGTCGCGTATTCCACTGGAGGTCAAGGCAGCATTCTGTTCATC GAAGTTGCAGACATGCCAGGCAACGGCAGAGTCCAGCTCACCGGAAAGCTGGGAGACGTGCTGAAGGAGAGTGTA GAGGTAGCTTTGACGTGGGTCAAAGCTCATGCGTTCGAGCTTGGGCTGACTGCGGACCCTACCGAGGATATCATG AAGAACCGCAGCCTGCACGTTCACTGCCCGTCCGGAGCCATCCCGAAGGACGGTCCCTCGGCAGGTCTAGCACAC ACGATGGGTCTGATCTCGCTATTCACCGGCAAAGCGGTGCCTCCCAGTGTTGCCATGACCGGAGAAGTGTCGCTC CGCGGCAAGGTAATGCCTGTTGGTGGCATAAAGGAGAAGCTGATCGGTGCGCTGCGCGCCGGCGTCAAGACTGTC CTCTTGCCCCATCACAACCGCAAGGATGTCAAGGACGTGCCGCAGGAAGTCAGCGAAGGACTTGAGATCGTATAT GTAACGCATATCTGGGAAGCTATCCGACAGGTGTGGCCCGATGCCCACTGGCCTGGTCAGCACACCAACTTCATC GAGAGCCGGCTGTAA |
| Transcript | >Ani_SJS72_1|g1150.t1 ATGGGTTCCAACAGCGGCAGAACAACCAAGCTCCCCTTGGTCCCGCTGCCCAAAGGATCGGTCTTACTTCCTGGA ATTACGCTACGTATTCCTGTCTCGAATCGCCCGGATCTCGCCAACTTACTCTCGACAATCGTTGATCGATCAGCC GTGGCGAAGCGCGATGGAACGGCTATCACTTTCGGATGCGTTCCCCTCAGTTCACCGTATCTTAGCAAGGACGGT CAACGACTCATCGACGATGGAAGTTTGGATGAGGACCGGAGAGAGGAGTTTGATATGATTGATGCTGGACAAGCC AGAAAGGAGGATTTGTTTCGACATGGTACCGTTGGTAAAGTGATCGGTATCCAGCGCCGGGCCTATTCGGAGCCG GCTCTTGTGGTCCAGGGTGTCCAGCGGTTCACCATCAGGCGCGTCCTGAAGGAGAGGCCGTTTTTCGAGGCTGAA GCTGTTGTTCATGATGAGAAAGTCTCCGGCGATGCTGAAACAGTGGAGTTATTTCAACAGCTGCGACAACTTTCT CGCGAGCTCCTGACCTTGCTGCGACTGTCTTCGTTGCTGCCATCTCCGGGAAGCCGCCTGTCCCCACTCATTGCC CGGAAATTCGAGCTGTTCATAACCAAGTCCGATGTCTCCCATGCAGGTAGACTAGCCGATTTCATGGCGGACGTT GCTGACTCCGGCTTCGAAGAGAAGCTTCGCATATTAGCGTCGCTTGACGTCAAAATAAGGCTAGAGAGAGTTGTT GAGATCCTAACTAGGCAATTACAGAGCATTAAGAGCAATGTGAAGGTCACAACAATCACCACCAACAGCTTTCCT AGCTCTGGGTTTGATATCAATCAGATCGATCCCCGTGACCGCGAGATTCTGGCAAGGAAGGCGATGGCTGGTCTC AGCGGACTGACGCCACCCGGGTTGTCAGCCGGTCGAAACAATGACAACGATGACAAGGAATCAAACGAAGTCGAT GAGCTGCAGCAGAGACTGCAAGAGGCCCAGCTTAGCCCTGAGGCTAGAAAGGTTGCCGACAAGGAGCTGCGACGT CTTCGTAAAATGAACCCGGCAAATGCTGAGTACGGTGTCTGCCGGACCTACCTCGAGAATATTGCGGATATCCCA TGGACTAAGATGACCGAGGACCAGCTTGGACCGGAGACATTGAAGAGAGCCAGAAAACAGCTAGACGATGATCAC TACGGTTTGGAGAAGATCAAGAAGAGACTTCTTGAGTATTTGGCCGTGCTCCGACTCAAGCAGTCTACCAACAGA GATGTCGAGCGCCAGATTGAGTCCTTGTCGAAAGAGCTCGAGGCATCCGATGGAGGCGATCTTGAGAAGGAGGTA CCTGTTCTGTCCGAGACGGATCGAGTCGCTGTTGAGACAAAGCTGCACATGCTGAAGACTCGCCGCATGGGAGAC AAGTCACCCATCCTCCTGCTTGTTGGTCCACCAGGCGTTGGTAAGACCAGCTTGGCACGATCAGTGGCCTCATCG CTCGGTCGCAAGTTTCACAGAATCTCTTTGGGTGGCGTTAGAGACGAGGCTGAAATCCGAGGCCATCGGCGAACC TATGTTGCTGCGATGCCGGGACTAATCGTCAGTGGTCTCAAGAAGGTTGGCGTTGCTAATCCAGTGTTCTTGCTT GACGAGATTGACAAGGTCGGAGGCGCCAATTTCCAAGGAGACCCATCCGCAGCCATGCTTGAGGTCCTGGATCCT GAACAGAACCATACATTTTCGGATCACTACATCAACATCCCTATTGATCTGAGCAAGGTGCTTTTCATTGCCACT GCCAATTCTTTGGACACTATCCCGGCACCCCTGCTTGACCGGATGGAAACTATCTCTCTGTCTGGCTACACCACG GTTGAGAAGCGACACATTGCCAAGAGACACCTCATTCCCAAGCAAATCAGGGCGAACGGGCTTTCCGATGGTCAG GTCGTTCTGTCTGACGAAGTAATTGACAAGATTATTACGTCTTACACCAGGGAGTCGGGTGTTCGTAACCTAGAG CGTGAGCTTGGCTCGGTCTGTCGGTTCAAGGCTGTCCAGTTTGCGGATGCGGGGGATGCAGGCCGACTTGACGCG TACAACCCCGTGGTGAGCATGGACGAGTTGGAAGAAATATTAGGTATCGAGCGCTTTGAGGAAGAAATCGCCGAA AAGCATGGCCGTCCCGGTGTTGTCACTGGACTTGTCGCGTATTCCACTGGAGGTCAAGGCAGCATTCTGTTCATC GAAGTTGCAGACATGCCAGGCAACGGCAGAGTCCAGCTCACCGGAAAGCTGGGAGACGTGCTGAAGGAGAGTGTA GAGGTAGCTTTGACGTGGGTCAAAGCTCATGCGTTCGAGCTTGGGCTGACTGCGGACCCTACCGAGGATATCATG AAGAACCGCAGCCTGCACGTTCACTGCCCGTCCGGAGCCATCCCGAAGGACGGTCCCTCGGCAGGTCTAGCACAC ACGATGGGTCTGATCTCGCTATTCACCGGCAAAGCGGTGCCTCCCAGTGTTGCCATGACCGGAGAAGTGTCGCTC CGCGGCAAGGTAATGCCTGTTGGTGGCATAAAGGAGAAGCTGATCGGTGCGCTGCGCGCCGGCGTCAAGACTGTC CTCTTGCCCCATCACAACCGCAAGGATGTCAAGGACGTGCCGCAGGAAGTCAGCGAAGGACTTGAGATCGTATAT GTAACGCATATCTGGGAAGCTATCCGACAGGTGTGGCCCGATGCCCACTGGCCTGGTCAGCACACCAACTTCATC GAGAGCCGGCTGTAA |
| Gene | >Ani_SJS72_1|g1150.t1 ATGGGTTCCAACAGCGGCAGAACAACCAAGCTCCCCTTGGTCCCGCTGCCCAAAGGATCGGTCTTACTTCCTGGA ATTACGCTACGTATTCCTGTCTCGAATCGCCCGGATCTCGCCAACTTACTCTCGACAATCGTTGATCGATCAGCC GTGGCGAAGCGCGATGGAACGGCTATCACTTTCGGATGCGTTCCCCTCAGTTCACCGTATCTTAGCAAGGACGGT CAACGACTCATCGACGATGGAAGTTTGGATGAGGACCGGAGAGAGGAGTTTGATATGATTGATGCTGGACAAGCC AGAAAGGAGGATTTGTTTCGACATGGTACCGTTGGTAAAGTGATCGGTATCCAGCGCCGGGCCTATTCGGAGCCG GCTCTTGTGGTCCAGGGTGTCCAGCGGTTCACCATCAGGCGCGTCCTGAAGGAGAGGCCGTTTTTCGAGGCTGAA GCTGTTGTTCATGATGAGAAAGGTCAGTTTTCTTTCATTGCCCTGCCCTGCTGTTGCTACTTCTTATTTGGACGA TTGCCTAATCTGGTTATTTCTAGAAACAGTCTCCGGCGATGCTGAAACAGTGGAGTTATTTCAACAGCTGCGACA ACTTTCTCGCGAGCTCCTGACCTTGCTGCGACTGTCTTCGTTGCTGCCATCTCCGGGAAGCCGCCTGTCCCCACT CATTGCCCGGAAATTCGAGCTGTTCATAACCAAGTCCGATGTCTCCCATGCAGGTAGACTAGCCGATTTCATGGC GGACGTTGCTGACTCCGGCTTCGAAGAGAAGCTTCGCATATTAGCGTCGCTTGACGTCAAAATAAGGCTAGAGAG AGTTGTTGAGATCCTAACTAGGCAATTACAGAGCATTAAGAGCAATGTGAAGGTCACAACAATCACCACCAACAG CTTTCCTAGCTCTGGGTTTGATATCAATCAGATCGATCCCCGTGACCGCGAGATTCTGGCAAGGAAGGCGATGGC TGGTCTCAGCGGACTGACGCCACCCGGGTTGTCAGCCGGTCGAAACAATGACAACGATGACAAGGAATCAAACGA AGTCGATGAGCTGCAGCAGAGACTGCAAGAGGCCCAGCTTAGCCCTGAGGCTAGAAAGGTTGCCGACAAGGAGCT GCGACGTCTTCGTAAAATGAACCCGGCAAATGCTGAGTACGGTGTCTGCCGGACCTACCTCGAGAATATTGCGGA TATCCCATGGACTAAGATGACCGAGGACCAGCTTGGACCGGAGACATTGAAGAGAGCCAGAAAACAGCTAGACGA TGATCACTACGGTTTGGAGAAGATCAAGAAGAGACTTCTTGAGTATTTGGCCGTGCTCCGACTCAAGCAGTCTAC CAACAGAGATGTCGAGCGCCAGATTGAGTCCTTGTCGAAAGAGCTCGAGGCATCCGATGGAGGCGATCTTGAGAA GGAGGTACCTGTTCTGTCCGAGACGGATCGAGTCGCTGTTGAGACAAAGCTGCACATGCTGAAGACTCGCCGCAT GGGAGACAAGTCACCCATCCTCCTGCTTGTTGGTCCACCAGGCGTTGGTAAGACCAGCTTGGCACGATCAGTGGC CTCATCGCTCGGTCGCAAGTTTCACAGAATCTCTTTGGGTGGCGTTAGAGACGAGGCTGAAATCCGAGGCCATCG GCGAACCTATGTTGCTGCGATGCCGGGACTAATCGTCAGTGGTCTCAAGAAGGTTGGCGTTGCTAATCCAGTGTT CTTGCTTGACGAGATTGACAAGGTCGGAGGCGCCAATTTCCAAGGAGACCCATCCGCAGCCATGCTTGAGGTCCT GGATCCTGAACAGAACCATACATTTTCGGATCACTACATCAACATCCCTATTGATCTGAGCAAGGTGCTTTTCAT TGCCACTGCCAATTCTTTGGACACTATCCCGGCACCCCTGCTTGACCGGATGGAAACTATCTCTCTGTCTGGCTA CACCACGGTTGAGAAGCGACACATTGCCAAGAGACACCTCATTCCCAAGCAAATCAGGGCGAACGGGCTTTCCGA TGGTCAGGTCGTTCTGTCTGACGAAGTAATTGACAAGATTATTACGTCTTACACCAGGGAGTCGGGTGTTCGTAA CCTAGAGCGTGAGCTTGGCTCGGTCTGTCGGTTCAAGGCTGTCCAGTTTGCGGATGCGGGGGATGCAGGCCGACT TGACGCGTACAACCCCGTGGTGAGCATGGACGAGTTGGAAGAAATATTAGGTATCGAGCGCTTTGAGGAAGAAAT CGCCGAAAAGCATGGCCGTCCCGGTGTTGTCACTGGACTTGTCGCGTATTCCACTGGAGGTCAAGGCAGCATTCT GTTCATCGAAGTTGCAGACATGCCAGGCAACGGCAGAGTCCAGCTCACCGGAAAGCTGGGAGACGTGCTGAAGGA GAGTGTAGAGGTAGCTTTGACGTGGGTCAAAGCTCATGCGTTCGAGCTTGGGCTGACTGCGGACCCTACCGAGGA TATCATGAAGAACCGCAGCCTGCACGTTCACTGCCCGTCCGGAGCCATCCCGAAGGACGGTCCCTCGGCAGGTCT AGCACACACGATGGGTCTGATCTCGCTATTCACCGGCAAAGCGGTGCCTCCCAGTGTTGCCATGACCGGAGAAGT GTCGCTCCGCGGCAAGGTAATGCCTGTTGGTGGCATAAAGGAGAAGCTGATCGGTGCGCTGCGCGCCGGCGTCAA GACTGTCCTCTTGCCCCATCACAACCGCAAGGATGTCAAGGACGTGCCGCAGGAAGTCAGCGAAGGACTTGAGAT CGTATATGTAACGTGAGTACCTTAATAATCCGTTCTTGCTGTTGCATATTGCTAACACTTGACAGGCATATCTGG GAAGCTATCCGACAGGTGTGGCCCGATGCCCACTGGCCTGGTCAGCACACCAACTTCATCGAGAGCCGGCTGTAA |