© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g1124.t1 |
| Gene name | |
| Location | scaffold_005:239750..240840 |
| Strand | + |
| Gene length (bp) | 1090 |
| Transcript length (bp) | 876 |
| Coding sequence length (bp) | 876 |
| Protein length (aa) | 292 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01794 | Ferric_reduct | Ferric reductase like transmembrane component | 1.2E-11 | 118 | 258 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 164 | 186 | 22 |
| 2 | 206 | 228 | 22 |
| 3 | 247 | 269 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1124.t1 MSSTWPWHFTSLTDAEKQQRRELLDLRGLYAQCSVLVALVLVRVYKKSFSEAPGSEKPAERRSRRKNSEKSWLDT PPVAGWMETRRQYIVCLIWLGWLLSLCIWNSGEDYLHFTKALAHVSLSQLPLQVLMSPSLYMSPSPGSPSVVSVI TSVPQPTINAYHRLFGRIVLAPLLIAHAFMYDSFFLQSSYPGFSSLFAKRIWDSDVQWGVAAATMVGAVALFARP AAMPSWVRWLKPTSAKSRQQVFYLVHVSIVGALELAAFCHVSVARTYILESFASSAINFACCYMMQ* |
| Coding | >Ani_SJS72_1|g1124.t1 ATGTCGTCTACTTGGCCGTGGCATTTCACGTCTCTCACAGACGCTGAGAAGCAGCAACGCCGGGAGCTTCTTGAT TTACGTGGACTCTACGCGCAGTGCTCCGTGTTGGTTGCTCTTGTTTTGGTTCGAGTATATAAGAAGTCCTTTAGC GAAGCCCCTGGCTCCGAAAAGCCAGCCGAGAGGCGCTCGCGGCGAAAGAATTCGGAAAAATCATGGTTGGATACG CCCCCAGTTGCTGGCTGGATGGAGACCCGAAGACAATACATTGTCTGTCTCATCTGGCTTGGCTGGCTTCTGAGT CTTTGCATCTGGAATTCTGGTGAAGATTATCTCCACTTCACCAAAGCTCTAGCCCATGTCAGCCTCTCCCAGCTC CCCTTGCAGGTGCTCATGTCACCGTCCTTGTACATGAGTCCATCACCAGGATCACCGTCCGTCGTGTCGGTTATC ACATCCGTTCCGCAGCCGACCATTAACGCCTACCATCGTCTATTTGGTCGAATCGTTCTTGCGCCGCTGCTCATT GCCCACGCTTTCATGTACGATTCTTTCTTCCTGCAGTCGAGCTACCCTGGCTTCAGCTCGCTCTTTGCGAAGCGT ATCTGGGATTCTGATGTTCAGTGGGGTGTCGCTGCAGCCACCATGGTGGGCGCGGTCGCTCTCTTTGCGCGACCG GCAGCCATGCCTAGCTGGGTACGCTGGTTGAAACCGACTTCTGCCAAGTCCAGACAGCAGGTGTTTTACCTTGTG CATGTGTCCATCGTGGGAGCCTTGGAACTTGCAGCGTTCTGCCATGTTTCGGTGGCGCGCACCTATATCCTTGAG TCTTTTGCGAGCTCCGCGATCAATTTCGCCTGTTGCTATATGATGCAATAG |
| Transcript | >Ani_SJS72_1|g1124.t1 ATGTCGTCTACTTGGCCGTGGCATTTCACGTCTCTCACAGACGCTGAGAAGCAGCAACGCCGGGAGCTTCTTGAT TTACGTGGACTCTACGCGCAGTGCTCCGTGTTGGTTGCTCTTGTTTTGGTTCGAGTATATAAGAAGTCCTTTAGC GAAGCCCCTGGCTCCGAAAAGCCAGCCGAGAGGCGCTCGCGGCGAAAGAATTCGGAAAAATCATGGTTGGATACG CCCCCAGTTGCTGGCTGGATGGAGACCCGAAGACAATACATTGTCTGTCTCATCTGGCTTGGCTGGCTTCTGAGT CTTTGCATCTGGAATTCTGGTGAAGATTATCTCCACTTCACCAAAGCTCTAGCCCATGTCAGCCTCTCCCAGCTC CCCTTGCAGGTGCTCATGTCACCGTCCTTGTACATGAGTCCATCACCAGGATCACCGTCCGTCGTGTCGGTTATC ACATCCGTTCCGCAGCCGACCATTAACGCCTACCATCGTCTATTTGGTCGAATCGTTCTTGCGCCGCTGCTCATT GCCCACGCTTTCATGTACGATTCTTTCTTCCTGCAGTCGAGCTACCCTGGCTTCAGCTCGCTCTTTGCGAAGCGT ATCTGGGATTCTGATGTTCAGTGGGGTGTCGCTGCAGCCACCATGGTGGGCGCGGTCGCTCTCTTTGCGCGACCG GCAGCCATGCCTAGCTGGGTACGCTGGTTGAAACCGACTTCTGCCAAGTCCAGACAGCAGGTGTTTTACCTTGTG CATGTGTCCATCGTGGGAGCCTTGGAACTTGCAGCGTTCTGCCATGTTTCGGTGGCGCGCACCTATATCCTTGAG TCTTTTGCGAGCTCCGCGATCAATTTCGCCTGTTGCTATATGATGCAATAG |
| Gene | >Ani_SJS72_1|g1124.t1 ATGTCGTCTACTTGGCCGTGGCATTTCACGTCTCTCACAGACGCTGAGAAGCAGCAACGCCGGGAGCTTCTTGAT TTACGTGGACTCTACGCGCAGTGCTCCGTGTTGGTTGCTCTTGTTTTGGTTCGAGTATATAAGAAGTCCTTTAGC GAAGCCCCTGGCTCCGAAAAGCCAGCCGAGAGGCGCTCGCGGCGAAAGAATTCGGAAAAATCATGGTTGGATACG CCCCCAGTTGCTGGCTGGATGGAGACCCGAAGACAATACATTGTCTGTCTCATCTGGCTTGGCTGGCTTCTGAGT CTTTGCATCTGGAATTCTGGTGAAGGTGGGTCAATAATTTCTATCATAATTCTTGATACTACTAGTACCCGAGCT TGGGGCATTGGGCAACAGGATTACATTTGTCTGGGCTCCGATTTGCCAGAAATCTACACTTTGTGTTCATCTAAG CTCCCGCTAACTACAACAATCCTCTGTCTTCTATTCTTCTATCACCCACATCGTGGAGACGAAAGCTAAGCCATT GTTGGTGTAAACAGATTATCTCCACTTCACCAAAGCTCTAGCCCATGTCAGCCTCTCCCAGCTCCCCTTGCAGGT GCTCATGTCACCGTCCTTGTACATGAGTCCATCACCAGGATCACCGTCCGTCGTGTCGGTTATCACATCCGTTCC GCAGCCGACCATTAACGCCTACCATCGTCTATTTGGTCGAATCGTTCTTGCGCCGCTGCTCATTGCCCACGCTTT CATGTACGATTCTTTCTTCCTGCAGTCGAGCTACCCTGGCTTCAGCTCGCTCTTTGCGAAGCGTATCTGGGATTC TGATGTTCAGTGGGGTGTCGCTGCAGCCACCATGGTGGGCGCGGTCGCTCTCTTTGCGCGACCGGCAGCCATGCC TAGCTGGGTACGCTGGTTGAAACCGACTTCTGCCAAGTCCAGACAGCAGGTGTTTTACCTTGTGCATGTGTCCAT CGTGGGAGCCTTGGAACTTGCAGCGTTCTGCCATGTTTCGGTGGCGCGCACCTATATCCTTGAGTCTTTTGCGAG CTCCGCGATCAATTTCGCCTGTTGCTATATGATGCAATAG |