© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g11122.t1 |
| Gene name | |
| Location | scaffold_194:5047..6130 |
| Strand | - |
| Gene length (bp) | 1083 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.8E-12 | 9 | 295 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 81 | 100 | 19 |
| 4 | 113 | 132 | 19 |
| 5 | 154 | 176 | 22 |
| 6 | 188 | 210 | 22 |
| 7 | 214 | 236 | 22 |
| 8 | 243 | 265 | 22 |
| 9 | 280 | 299 | 19 |
| 10 | 319 | 341 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g11122.t1 MIIGSLYRPGPRKNLVFAIYGTAGVLGFFGGIAIAGIVGQFLHWSYYFWIGAALAAITLIASICAMPYSTLANDS RKKVKMDYLGAICIVCGLVLTIFAITQSAHAPSGWKTPYVLVIFLLGIMFLAGTWYVEKNVVSDPLLPASLFSVK SMTPLLIALLLLYGTWGIFSVNGSLYFQTVLSASPLQVVLWYIPIGVVGLVVSVIEGYILHLVPGHVIMIISGLA AVGSQLLLACIPPSGGSYWAWIFPSSILSTLGIDLSTILMTVFITTVVPSSQQGLAGGVLNSVLQLGVALVLGLA DIIQSAVVRETGLEKSYKATFWFGVGVAGASLIILMIWGRIPKAVSSLTADEEQEQASSS* |
| Coding | >Ani_SJS72_1|g11122.t1 ATGATTATAGGCTCACTCTACCGGCCCGGGCCTCGTAAAAACCTTGTCTTCGCAATCTACGGCACCGCGGGTGTT CTGGGCTTTTTTGGTGGCATTGCCATTGCAGGGATCGTGGGTCAATTCTTACACTGGAGTTATTACTTTTGGATT GGCGCTGCACTTGCAGCGATAACGCTCATTGCATCAATATGTGCTATGCCATATTCGACTTTGGCAAACGATTCC CGAAAGAAAGTGAAAATGGACTATCTCGGTGCGATTTGCATTGTTTGCGGACTCGTTCTTACGATTTTCGCGATC ACCCAATCTGCACATGCACCCTCGGGATGGAAAACGCCATATGTCCTGGTCATTTTCCTCCTAGGCATTATGTTC CTTGCCGGGACGTGGTATGTCGAAAAGAATGTTGTCTCGGATCCACTTTTGCCTGCATCACTCTTCTCGGTGAAA TCAATGACACCTTTACTCATTGCCCTCCTCCTACTCTACGGAACCTGGGGTATTTTCTCCGTCAATGGTTCACTC TACTTCCAAACCGTCTTGTCAGCTTCACCACTTCAGGTTGTCCTGTGGTACATACCCATTGGCGTCGTTGGGCTT GTCGTCAGTGTCATTGAAGGGTACATCTTACATCTCGTCCCTGGCCATGTTATCATGATAATCTCGGGCTTAGCC GCCGTTGGATCGCAACTCCTCCTCGCTTGTATTCCACCTAGTGGTGGAAGCTACTGGGCATGGATCTTTCCATCG TCCATTCTCAGCACTCTTGGCATCGACCTGTCTACTATCTTGATGACAGTTTTCATTACGACAGTCGTCCCATCT TCGCAGCAGGGACTGGCAGGGGGTGTGCTAAACTCCGTTCTGCAGCTTGGTGTCGCCTTAGTCCTCGGGTTAGCA GACATTATTCAGTCGGCCGTGGTCAGGGAGACTGGACTAGAGAAAAGCTATAAAGCAACATTCTGGTTCGGAGTC GGTGTTGCTGGAGCCAGTTTGATAATTCTGATGATCTGGGGCAGGATACCCAAAGCTGTCAGCTCGCTGACAGCC GATGAAGAACAGGAACAGGCTTCTTCGTCCTGA |
| Transcript | >Ani_SJS72_1|g11122.t1 ATGATTATAGGCTCACTCTACCGGCCCGGGCCTCGTAAAAACCTTGTCTTCGCAATCTACGGCACCGCGGGTGTT CTGGGCTTTTTTGGTGGCATTGCCATTGCAGGGATCGTGGGTCAATTCTTACACTGGAGTTATTACTTTTGGATT GGCGCTGCACTTGCAGCGATAACGCTCATTGCATCAATATGTGCTATGCCATATTCGACTTTGGCAAACGATTCC CGAAAGAAAGTGAAAATGGACTATCTCGGTGCGATTTGCATTGTTTGCGGACTCGTTCTTACGATTTTCGCGATC ACCCAATCTGCACATGCACCCTCGGGATGGAAAACGCCATATGTCCTGGTCATTTTCCTCCTAGGCATTATGTTC CTTGCCGGGACGTGGTATGTCGAAAAGAATGTTGTCTCGGATCCACTTTTGCCTGCATCACTCTTCTCGGTGAAA TCAATGACACCTTTACTCATTGCCCTCCTCCTACTCTACGGAACCTGGGGTATTTTCTCCGTCAATGGTTCACTC TACTTCCAAACCGTCTTGTCAGCTTCACCACTTCAGGTTGTCCTGTGGTACATACCCATTGGCGTCGTTGGGCTT GTCGTCAGTGTCATTGAAGGGTACATCTTACATCTCGTCCCTGGCCATGTTATCATGATAATCTCGGGCTTAGCC GCCGTTGGATCGCAACTCCTCCTCGCTTGTATTCCACCTAGTGGTGGAAGCTACTGGGCATGGATCTTTCCATCG TCCATTCTCAGCACTCTTGGCATCGACCTGTCTACTATCTTGATGACAGTTTTCATTACGACAGTCGTCCCATCT TCGCAGCAGGGACTGGCAGGGGGTGTGCTAAACTCCGTTCTGCAGCTTGGTGTCGCCTTAGTCCTCGGGTTAGCA GACATTATTCAGTCGGCCGTGGTCAGGGAGACTGGACTAGAGAAAAGCTATAAAGCAACATTCTGGTTCGGAGTC GGTGTTGCTGGAGCCAGTTTGATAATTCTGATGATCTGGGGCAGGATACCCAAAGCTGTCAGCTCGCTGACAGCC GATGAAGAACAGGAACAGGCTTCTTCGTCCTGA |
| Gene | >Ani_SJS72_1|g11122.t1 ATGATTATAGGCTCACTCTACCGGCCCGGGCCTCGTAAAAACCTTGTCTTCGCAATCTACGGCACCGCGGGTGTT CTGGGCTTTTTTGGTGGCATTGCCATTGCAGGGATCGTGGGTCAATTCTTACACTGGAGTTATTACTTTTGGATT GGCGCTGCACTTGCAGCGATAACGCTCATTGCATCAATATGTGCTATGCCATATTCGACTTTGGCAAACGATTCC CGAAAGAAAGTGAAAATGGACTATCTCGGTGCGATTTGCATTGTTTGCGGACTCGTTCTTACGATTTTCGCGATC ACCCAATCTGCACATGCACCCTCGGGATGGAAAACGCCATATGTCCTGGTCATTTTCCTCCTAGGCATTATGTTC CTTGCCGGGACGTGGTATGTCGAAAAGAATGTTGTCTCGGATCCACTTTTGCCTGCATCACTCTTCTCGGTGAAA TCAATGACACCTTTACTCATTGCCCTCCTCCTACTCTACGGAACCTGGGGTATTTTCTCCGTCAATGGTTCACTC TACTTCCAAACCGTCTTGTCAGCTTCACCACTTCAGGTTGTCCTGTGGTACATACCCATTGGCGTCGTTGGGCTT GTCGTCAGTGTCATTGAAGGGTACATCTTACATCTCGTCCCTGGCCATGTTATCATGATAATCTCGGGCTTAGCC GCCGTTGGATCGCAACTCCTCCTCGCTTGTATTCCACCTAGTGGTGGAAGCTACTGGGCATGGATCTTTCCATCG TCCATTCTCAGCACTCTTGGCATCGACCTGTCTACTATCTTGATGACAGTTTTCATTACGACAGTCGTCCCATCT TCGCAGCAGGGACTGGCAGGGGGTGTGCTAAACTCCGTTCTGCAGCTTGGTGTCGCCTTAGTCCTCGGGTTAGCA GACATTATTCAGTCGGCCGTGGTCAGGGAGACTGGACTAGAGAAAAGCTATAAAGCAACATTCTGGTTCGGAGTC GGTGTTGCTGGAGCCAGTTTGATAATTCTGATGATCTGGGGCAGGATACCCAAAGCTGTCAGCTCGCTGACAGCC GATGAAGAACAGGAACAGGCTTCTTCGTCCTGA |