Protein ID | Ani_SJS72_1|g11110.t1 |
Gene name | |
Location | scaffold_191:10435..13703 |
Strand | + |
Gene length (bp) | 3268 |
Transcript length (bp) | 2262 |
Coding sequence length (bp) | 2262 |
Protein length (aa) | 754 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 2.8E-18 | 59 | 182 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.3E-41 | 340 | 468 |
PF17862 | AAA_lid_3 | AAA+ lid domain | 4.0E-09 | 492 | 539 |
PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 1.1E-13 | 576 | 642 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016887 | ATP hydrolysis activity | Yes |
GO:0003723 | RNA binding | Yes |
GO:0005524 | ATP binding | Yes |
GO:1901265 | nucleoside phosphate binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0005488 | binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0003674 | molecular_function | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0003676 | nucleic acid binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0003824 | catalytic activity | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:0016787 | hydrolase activity | No |
GO:0017076 | purine nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0036094 | small molecule binding | No |
Orthofinder run ID | 3 |
Orthogroup | 2657 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g11110.t1 MGEDLKKPLERGTSNIQVRPTGLGGMDRQIESINESLADFNPCLVNLVMPSFYEHSRGILLYGPKGTGKTALLEQ IKAAGWRQTFHIGSSAFGRNIGDAESKLRNVFQEAMRCQPSAILIDQVEFIAPRRTSLDSQSLASVLCECIDATK NAFILIVAATRHPNDVDDALRTPHRLATEIELHIPTAHDRAQILRAICGGPSPALSDTLIDMIAEKTHGYVGADL FALLQLISRKARQRQMSEFELRVSDERTPSDNAVEGPITQEPGTAIHIKDVDVLSALQETRPTAMREVFLETPKV RWSDIGGQHEIKRRLQKAVERPLKHPERMRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILS MYVGESERALREIFRKARSARPSIIFFDEIDAIASKRGTSSQGGVNVLTTLLNEMDGIEELKSVLVIAATNKPEV IDPALMRPGRLDNILYIGPPDYEARKEILDIWFRKSVINPEVEVDVLAMKTDGYSGAEIVSICETAGDAALDAEE ETGQAQDIRWEHFEYALKQVKRQITAAVVEAKKDYSRTPSPSADASRSSKIVIEKLTKNVTESHLREIFGGFGDI QSLDLPMNKAFMTNRGTAYILYHDPADAEAAIAHMHEAQLDGAMLNFNIAEEALAVQDTAADLRRIVALQGRRHP LGGIAVLGIWKGMTSIGLALCRAPGRHAVLDPFLPSLSQTPHRQDGHIRVWTALSVAVAVARATAAMAIAVAVIG TGV* |
Coding | >Ani_SJS72_1|g11110.t1 ATGGGCGAAGATCTTAAAAAACCTCTAGAGCGTGGAACTTCCAATATTCAAGTGCGACCTACTGGGCTCGGAGGG ATGGACCGGCAAATTGAAAGTATCAATGAAAGTCTCGCTGACTTTAACCCTTGTCTGGTCAATCTAGTAATGCCT TCATTCTATGAACATAGTCGAGGCATTCTTCTTTACGGTCCCAAGGGAACAGGTAAGACAGCGCTTCTGGAACAG ATTAAAGCAGCAGGATGGAGGCAAACATTCCATATTGGATCCTCAGCCTTTGGCCGCAATATCGGGGACGCCGAA TCCAAGCTGCGCAACGTATTCCAAGAAGCGATGCGCTGTCAGCCCAGTGCAATCCTAATTGACCAGGTGGAGTTT ATTGCGCCTAGACGGACATCGCTCGATAGCCAGTCGTTGGCATCGGTTCTATGCGAATGCATTGACGCTACAAAG AATGCATTCATTCTAATAGTCGCCGCAACCCGTCATCCGAATGATGTCGATGATGCCCTGAGGACCCCGCATCGA CTGGCAACCGAAATTGAACTGCATATTCCGACAGCACATGATCGAGCCCAAATATTACGTGCCATATGTGGAGGC CCATCCCCGGCATTGAGTGATACCCTCATAGACATGATAGCGGAGAAAACACACGGTTACGTTGGTGCCGATCTT TTCGCTTTGCTTCAGTTAATTAGTCGCAAGGCACGGCAAAGACAGATGTCGGAATTTGAGCTTCGTGTTAGCGAC GAACGCACACCTTCCGATAATGCTGTTGAAGGTCCGATTACTCAGGAACCAGGTACAGCTATACATATCAAGGAC GTTGATGTCTTATCAGCTTTACAGGAAACTCGGCCTACTGCTATGCGGGAAGTGTTTCTGGAGACGCCCAAGGTC AGGTGGTCGGACATTGGTGGACAGCACGAAATTAAGAGACGTCTACAGAAAGCAGTGGAGCGTCCATTGAAGCAT CCTGAGCGAATGAGGAGGCTTAATTTGACCAGCAAGAAAGGTGTACTTCTTTACGGGCCACCTGGGTGCTCTAAG ACGCTGACGGTGAAAGCACTGGCCACGGAGGCAGGGCTTAACTTCCTGGCAGTCAAGGGAGCCGAGATTCTGAGC ATGTACGTCGGAGAATCTGAGCGAGCATTACGAGAAATCTTTCGAAAAGCTCGCTCTGCAAGGCCCAGCATCATA TTCTTCGATGAAATAGATGCTATCGCCTCTAAACGTGGCACTTCATCACAAGGCGGAGTCAATGTTCTTACAACC CTTCTCAATGAAATGGACGGCATCGAGGAGCTTAAAAGTGTCCTAGTTATCGCCGCCACGAACAAGCCTGAAGTG ATAGACCCGGCGTTGATGCGCCCCGGTCGACTGGACAATATACTTTACATAGGACCTCCCGACTACGAGGCGCGG AAGGAGATTTTGGACATATGGTTCCGCAAATCTGTCATTAACCCGGAAGTTGAGGTGGATGTGTTGGCCATGAAG ACTGACGGGTATTCGGGGGCTGAGATCGTGAGCATATGTGAGACAGCCGGTGATGCTGCTTTGGATGCGGAAGAG GAGACTGGCCAAGCACAAGATATCCGATGGGAGCATTTCGAGTATGCGCTCAAGCAGGTGAAAAGACAGATAACG GCTGCTGTTGTTGAGGCGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAAAG ATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATA CAAAGTCTTGATCTCCCTATGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATACTTTACCACGATCCT GCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACTTCAACATAGCA GAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCG CTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGT CGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACACATTCGCGTA TGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGG ACCGGAGTATGA |
Transcript | >Ani_SJS72_1|g11110.t1 ATGGGCGAAGATCTTAAAAAACCTCTAGAGCGTGGAACTTCCAATATTCAAGTGCGACCTACTGGGCTCGGAGGG ATGGACCGGCAAATTGAAAGTATCAATGAAAGTCTCGCTGACTTTAACCCTTGTCTGGTCAATCTAGTAATGCCT TCATTCTATGAACATAGTCGAGGCATTCTTCTTTACGGTCCCAAGGGAACAGGTAAGACAGCGCTTCTGGAACAG ATTAAAGCAGCAGGATGGAGGCAAACATTCCATATTGGATCCTCAGCCTTTGGCCGCAATATCGGGGACGCCGAA TCCAAGCTGCGCAACGTATTCCAAGAAGCGATGCGCTGTCAGCCCAGTGCAATCCTAATTGACCAGGTGGAGTTT ATTGCGCCTAGACGGACATCGCTCGATAGCCAGTCGTTGGCATCGGTTCTATGCGAATGCATTGACGCTACAAAG AATGCATTCATTCTAATAGTCGCCGCAACCCGTCATCCGAATGATGTCGATGATGCCCTGAGGACCCCGCATCGA CTGGCAACCGAAATTGAACTGCATATTCCGACAGCACATGATCGAGCCCAAATATTACGTGCCATATGTGGAGGC CCATCCCCGGCATTGAGTGATACCCTCATAGACATGATAGCGGAGAAAACACACGGTTACGTTGGTGCCGATCTT TTCGCTTTGCTTCAGTTAATTAGTCGCAAGGCACGGCAAAGACAGATGTCGGAATTTGAGCTTCGTGTTAGCGAC GAACGCACACCTTCCGATAATGCTGTTGAAGGTCCGATTACTCAGGAACCAGGTACAGCTATACATATCAAGGAC GTTGATGTCTTATCAGCTTTACAGGAAACTCGGCCTACTGCTATGCGGGAAGTGTTTCTGGAGACGCCCAAGGTC AGGTGGTCGGACATTGGTGGACAGCACGAAATTAAGAGACGTCTACAGAAAGCAGTGGAGCGTCCATTGAAGCAT CCTGAGCGAATGAGGAGGCTTAATTTGACCAGCAAGAAAGGTGTACTTCTTTACGGGCCACCTGGGTGCTCTAAG ACGCTGACGGTGAAAGCACTGGCCACGGAGGCAGGGCTTAACTTCCTGGCAGTCAAGGGAGCCGAGATTCTGAGC ATGTACGTCGGAGAATCTGAGCGAGCATTACGAGAAATCTTTCGAAAAGCTCGCTCTGCAAGGCCCAGCATCATA TTCTTCGATGAAATAGATGCTATCGCCTCTAAACGTGGCACTTCATCACAAGGCGGAGTCAATGTTCTTACAACC CTTCTCAATGAAATGGACGGCATCGAGGAGCTTAAAAGTGTCCTAGTTATCGCCGCCACGAACAAGCCTGAAGTG ATAGACCCGGCGTTGATGCGCCCCGGTCGACTGGACAATATACTTTACATAGGACCTCCCGACTACGAGGCGCGG AAGGAGATTTTGGACATATGGTTCCGCAAATCTGTCATTAACCCGGAAGTTGAGGTGGATGTGTTGGCCATGAAG ACTGACGGGTATTCGGGGGCTGAGATCGTGAGCATATGTGAGACAGCCGGTGATGCTGCTTTGGATGCGGAAGAG GAGACTGGCCAAGCACAAGATATCCGATGGGAGCATTTCGAGTATGCGCTCAAGCAGGTGAAAAGACAGATAACG GCTGCTGTTGTTGAGGCGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAAAG ATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATA CAAAGTCTTGATCTCCCTATGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATACTTTACCACGATCCT GCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACTTCAACATAGCA GAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCG CTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGT CGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACACATTCGCGTA TGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGG ACCGGAGTATGA |
Gene | >Ani_SJS72_1|g11110.t1 ATGGGCGAAGATCTTAAAAAACCTCTAGAGCGTGGAACTTCCAATATTCAAGTGCGACCTACTGGGCTCGGAGGG ATGGACCGGCAAATTGAAAGTATCAATGAAAGTCTCGCTGACTTTAACCCTTGTCTGGTCAATCTAGTAATGCCT TCATTCTATGAACATAGTCGAGGCATTCTTCTTTACGGTCCCAAGGGAACAGGTAAGACAGCGCTTCTGGAACAG ATTAAAGCAGCAGGATGGAGGCAAACATTCCATATTGGATCCTCAGCCTTTGGCCGCAATATCGGGGACGCCGAA TCCAAGCTGCGCAACGTATTCCAAGAAGCGATGCGCTGTCAGCCCAGTGCAATCCTAATTGACCAGGTGGAGTTT ATTGCGCCTAGACGGACATCGCTCGATAGCCAGTCGTTGGCATCGGTTCTATGCGAATGCATTGACGCTACAAAG AATGCATTCATTCTAATAGTCGCCGCAACCCGTCATCCGAATGATGTCGATGATGCCCTGAGGACCCCGCATCGA CTGGCAACCGAAATTGAACTGCATATTCCGACAGCACATGATCGAGCCCAAATATTACGTGCCATATGTGGAGGC CCATCCCCGGCATTGAGTGATACCCTCATAGACATGATAGCGGAGAAAACACACGGTTACGTTGGTGCCGATCTT TTCGCTTTGCTTCAGTTAATTAGTCGCAAGGCACGGCAAAGACAGATGTCGGAATTTGAGCTTCGTGTTAGCGAC GAACGCACACCTTCCGATAATGCTGTTGAAGGTCCGATTACTCAGGAACCAGGTACAGCTATACATATCAAGGAC GTTGATGTCTTATCAGCTTTACAGGAAACTCGGCCTACTGCTATGCGGGAAGTGTTTCTGGAGACGCCCAAGGTC AGGTGGTCGGACATTGGTGGACAGCACGAAATTAAGAGACGTCTACAGAAAGCAGTGGAGCGTCCATTGAAGGTA AGCGCGCACCTTCGGACTATGTTATTTCGGTTCTGACAAGACCAAGCATCCTGAGCGAATGAGGAGGCTTAATTT GACCAGCAAGAAAGGTGTACTTCTTTACGGGCCACCTGGGTGCTCTAAGACGCTGACGGTGAAAGCACTGGCCAC GGAGGCAGGGCTTAACTTCCTGGCAGTCAAGGGAGCCGAGATTCTGAGCATGTACGTCGGAGAATCTGAGCGAGC ATTACGAGAAATCTTTCGAAAAGCTCGCTCTGCAAGGCCCAGCATCATATTCTTCGATGAAATAGATGCTATCGC CTCTAAACGTGGCACTTCATCACAAGGCGGAGTCAATGTTCTTACAACCCTTCTCAATGAAATGGACGGCATCGA GGAGCTTAAAAGTGTCCTAGTTATCGCCGCCACGAACAAGCCTGAAGTGATAGACCCGGCGTTGATGCGCCCCGG TCGACTGGACAATATACTTTACATAGGACCTCCCGACTACGAGGCGCGGAAGGAGATTTTGGACATATGGTTCCG CAAATCTGTCATTAACCCGGAAGTTGAGGTGGATGTGTTGGCCATGAAGACTGACGGGTATTCGGGGGCTGAGAT CGTGAGCATATGTGAGACAGCCGGTGATGCTGCTTTGGATGCGGAAGAGGAGACTGGCCAAGCACAAGATATCCG ATGGGAGCATTTCGAGTATGCGCTCAAGCAGGTGAAAAGACAGATAACGGCTGCTGTTGTTGAGGCGTACGAACA GTGGGGTGACTCTGTTGACATATGAGCACAGCTTTTTTTATGTAGATACTATATAGCGATGCGATCATTCCGATT CGGAAGTACTAGACCACTTTTCACGGAGCCGCTGTTGTTCAACCGGCTACTTTGAAGGTTGCTTCCGCAGAGTTT TGTTCACTATGTGGGGCCTCTTTTGCTGAACAAAAGAAAAGCAAATAAGAAGAAATGAAAAAGAAAGCAAAGAAA AAGGAGAATAATGTTTCAGCTTTGGTTCTTGATGTGCAGGGGGCTAGGATAACAAACATTGGACCCGCCAGCGTA TTGGAGGAGGCACCCTACCTGGCGCTGACCTTCATACATGACACAAAAGGCTGTCAATACCATCTACTCTGCAAC TTTTGATCCGTCTTGGGCAACCCCACTCACTATCAGACCTCCCATGCGTCTCGCTCCCTTGGGATTTCGCTTATC CAGTCTTAATTCTTGCTACAATCAATTCAGCTTGCCCCTGGTTGATTTATAGGAAGCTTCCTCCACCAAGTGGAT CTTGTAGGATGCCAGAAAGATACACTCGGGGTCGCTCTCGTGCCCGTTTGCCATCCTATTCGGAATTTGATCGGG CCCCGTCCTTGCAGCGTTCTTTGTCTCCTCACTCAGAATCAAGATTCAACACTACACCTCGAACTCGTTCTGTGG AGCGTGGCGCTGTCCGTCGCAATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCACCAT CCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTG CCGATGCTTCAAGAAGCTCAAAGGTCGGTTGAGCTCCCATTGAACCAGGTTTTAATGCTGAAACTAATGGAAATC AAAGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGA CATACAAAGTCTTGATCTCCCTATGAATAAAGCTTGTAAACTCTCTAGACTTATGCTCTCCTAGGTGCCTAGGCT GACGCCTCACTAGTCATGACAAACAGGGGCACCGCATACATACTTTACCACGATCCTGCGGATGCAGAGGCGGCC ATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGAGAGCCTTC TCTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCCGTCG GATAGTCGCGCTCCAAGGTCGCCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATC TATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTCAAAC TCCCCACCGCCAAGACGGACACATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGC AGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGA |