© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g11040.t1 |
| Gene name | |
| Location | scaffold_181:2083..3521 |
| Strand | - |
| Gene length (bp) | 1438 |
| Transcript length (bp) | 1383 |
| Coding sequence length (bp) | 1383 |
| Protein length (aa) | 461 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.9E-30 | 73 | 410 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.8E-08 | 305 | 443 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 89 | 22 |
| 2 | 109 | 128 | 19 |
| 3 | 135 | 157 | 22 |
| 4 | 162 | 184 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 272 | 294 | 22 |
| 8 | 304 | 326 | 22 |
| 9 | 333 | 355 | 22 |
| 10 | 360 | 382 | 22 |
| 11 | 395 | 417 | 22 |
| 12 | 427 | 449 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g11040.t1 MTEEQSHTGVQHDSNVPQAETMLEDGLQRPSSGASDSESFAHSAPMSRVTTDADGNTYPEGGLEAWLVVFGSFMG LFGSLGLVNTIGTFQAYIEDHQLKDYSSGTTGWIFGMYAFLTFFCGVQIGPVFDAKGPRFLVFSGAVLVIVMMVA LGFCTQYWHFMLVIGIAGGVGASLIFTPAIAAIGHFFNEKRGVATGIAATGGSVGGVVFPLTLEALFPKIGFAWA TRVVALLCLISVAVACLLIKSRLPKKPAVKENMMPDFRIFREPKFALTTAGVFFIEWGLFIPISYISSYALAHGV SSQFSYQILAILNAGSFFGRGIPGFVADYLGRFNTLIVTVALCLICNACLWLPAGNSVPVMVVYCVIFGFASGSN ISLTPVCISQLCKIENYGRYYATAYTIVSFGTLTGIPIAGEILSRCNGEYWGLITFTTCCYALGLVCVTLVKVIH VGWRHPLAIY* |
| Coding | >Ani_SJS72_1|g11040.t1 ATGACGGAGGAACAGTCTCATACCGGGGTCCAACACGATAGCAACGTACCGCAGGCAGAGACTATGCTTGAAGAT GGCCTTCAGAGACCCTCGTCTGGAGCGTCTGACTCAGAGAGCTTCGCACACAGCGCCCCAATGTCTCGAGTCACA ACGGATGCAGATGGAAACACATATCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCTTTGGTAGTTTCATGGGT CTCTTTGGCTCCCTCGGCTTAGTGAACACCATTGGAACTTTCCAGGCCTATATTGAGGATCACCAGCTCAAAGAC TACAGCTCTGGAACTACAGGCTGGATTTTTGGCATGTACGCGTTTTTGACCTTTTTCTGCGGTGTACAGATAGGT CCAGTCTTCGACGCCAAAGGTCCACGATTCTTGGTGTTTTCGGGTGCTGTGTTGGTCATCGTCATGATGGTAGCT TTGGGTTTCTGCACTCAATATTGGCACTTCATGCTGGTCATCGGTATCGCTGGAGGAGTCGGAGCCTCCTTGATC TTCACCCCCGCAATAGCCGCGATTGGCCACTTCTTCAATGAGAAACGTGGCGTTGCCACTGGCATTGCTGCCACA GGTGGCTCCGTAGGAGGTGTTGTCTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGATAGGTTTTGCATGGGCA ACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCAGTGGCCGTTGCATGTTTGTTGATCAAGTCCCGGTTGCCTAAA AAGCCCGCCGTAAAGGAGAACATGATGCCTGATTTTCGTATCTTCCGGGAACCAAAATTTGCTCTTACCACTGCC GGCGTTTTCTTCATCGAATGGGGCCTTTTCATTCCAATCAGTTACATCTCCTCCTACGCCTTGGCTCATGGCGTT TCCTCCCAGTTCTCGTACCAGATCCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAAGAGGAATCCCTGGGTTT GTGGCTGATTATCTGGGACGGTTCAATACGCTCATCGTCACGGTTGCTTTATGCCTCATCTGCAACGCATGTCTG TGGCTTCCGGCCGGCAACAGTGTACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTTTTGCAAGCGGCAGCAAC ATCAGTCTGACTCCTGTTTGCATTTCTCAGCTGTGCAAGATCGAGAATTACGGCAGGTACTATGCTACTGCGTAC ACGATTGTGAGTTTTGGCACCCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCCGATGCAATGGCGAGTAT TGGGGCTTGATTACCTTCACAACTTGCTGCTATGCTCTTGGCCTCGTCTGCGTCACGTTGGTCAAGGTAATCCAC GTTGGCTGGCGTCACCCACTAGCGATATACTGA |
| Transcript | >Ani_SJS72_1|g11040.t1 ATGACGGAGGAACAGTCTCATACCGGGGTCCAACACGATAGCAACGTACCGCAGGCAGAGACTATGCTTGAAGAT GGCCTTCAGAGACCCTCGTCTGGAGCGTCTGACTCAGAGAGCTTCGCACACAGCGCCCCAATGTCTCGAGTCACA ACGGATGCAGATGGAAACACATATCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCTTTGGTAGTTTCATGGGT CTCTTTGGCTCCCTCGGCTTAGTGAACACCATTGGAACTTTCCAGGCCTATATTGAGGATCACCAGCTCAAAGAC TACAGCTCTGGAACTACAGGCTGGATTTTTGGCATGTACGCGTTTTTGACCTTTTTCTGCGGTGTACAGATAGGT CCAGTCTTCGACGCCAAAGGTCCACGATTCTTGGTGTTTTCGGGTGCTGTGTTGGTCATCGTCATGATGGTAGCT TTGGGTTTCTGCACTCAATATTGGCACTTCATGCTGGTCATCGGTATCGCTGGAGGAGTCGGAGCCTCCTTGATC TTCACCCCCGCAATAGCCGCGATTGGCCACTTCTTCAATGAGAAACGTGGCGTTGCCACTGGCATTGCTGCCACA GGTGGCTCCGTAGGAGGTGTTGTCTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGATAGGTTTTGCATGGGCA ACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCAGTGGCCGTTGCATGTTTGTTGATCAAGTCCCGGTTGCCTAAA AAGCCCGCCGTAAAGGAGAACATGATGCCTGATTTTCGTATCTTCCGGGAACCAAAATTTGCTCTTACCACTGCC GGCGTTTTCTTCATCGAATGGGGCCTTTTCATTCCAATCAGTTACATCTCCTCCTACGCCTTGGCTCATGGCGTT TCCTCCCAGTTCTCGTACCAGATCCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAAGAGGAATCCCTGGGTTT GTGGCTGATTATCTGGGACGGTTCAATACGCTCATCGTCACGGTTGCTTTATGCCTCATCTGCAACGCATGTCTG TGGCTTCCGGCCGGCAACAGTGTACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTTTTGCAAGCGGCAGCAAC ATCAGTCTGACTCCTGTTTGCATTTCTCAGCTGTGCAAGATCGAGAATTACGGCAGGTACTATGCTACTGCGTAC ACGATTGTGAGTTTTGGCACCCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCCGATGCAATGGCGAGTAT TGGGGCTTGATTACCTTCACAACTTGCTGCTATGCTCTTGGCCTCGTCTGCGTCACGTTGGTCAAGGTAATCCAC GTTGGCTGGCGTCACCCACTAGCGATATACTGA |
| Gene | >Ani_SJS72_1|g11040.t1 ATGACGGAGGAACAGTCTCATACCGGGGTCCAACACGATAGCAACGTACCGCAGGCAGAGACTATGCTTGAAGAT GGCCTTCAGAGACCCTCGTCTGGAGCGTCTGACTCAGAGAGCTTCGCACACAGCGCCCCAATGTCTCGAGTCACA ACGGATGCAGATGGAAACACATATCCTGAAGGCGGACTAGAGGCCTGGCTGGTTGTCTTTGGTAGTTTCATGGGT CTCTTTGGCTCCCTCGGCTTAGTGAACACCATTGGAACTTTCCAGGCCTATATTGAGGATCACCAGCTCAAAGAC TACAGCTCTGGAACTACAGGCTGGATTTTTGGCATGTACGCGTTTTTGACCTTTTTCTGCGGTGTACAGATAGGT CCAGTCTTCGACGCCAAAGGTCCACGATTCTTGGTGTTTTCGGGTGCTGTGTTGGTCATCGTCATGATGGTAGCT TTGGGTTTCTGCACTCAATATTGGCACTTCATGCTGGTCATCGGTATCGCTGGAGGAGTCGGAGCCTCCTTGATC TTCACCCCCGCAATAGCCGCGATTGGCCACTTCTTCAATGAGAAACGTGGCGTTGCCACTGGCATTGCTGCCACA GGTGGCTCCGTAGGAGGTGTTGTCTTCCCGCTTACCTTGGAGGCATTGTTCCCCAAGATAGGTTTTGCATGGGCA ACCCGGGTAGTTGCGCTTCTTTGCCTCATCTCAGTGGCCGTTGCATGTTTGTTGATCAAGTCCCGGTTGCCTAAA AAGCCCGCCGTAAAGGAGAACATGATGCCTGATTTTCGTATCTTCCGGGAACCAAAATTTGCTCTTACCACTGCC GGCGTTTTCTTCATCGAATGGGGCCTTTTCATTCCAATCAGTTACATCTCCTCCTACGCCTTGGCTCATGGCGTT TCCTCCCAGTTCTCGTACCAGATCCTGGCGATCCTCAATGCGGGTTCCTTCTTCGGAAGAGGAATCCCTGGGTTT GTGGCTGATTATCTGGGACGGTTCAATACGCTCATCGTCACGGTTGCTTTATGCCTCATCTGCAACGCATGTCTG TGGCTTCCGGCCGGCAACAGTGTACCTGTCATGGTTGTGTACTGCGTTATTTTTGGTTTTGCAAGCGGCAGCAAC ATCAGTCTGACTCCTGTTTGCATTTCTCAGCTGTGCAAGATCGAGAATTACGGCAGGTACTATGCTACTGCGTAC ACGATTGTGAGTTTTGGGTAGGTTTCCATGTAGCTGTCAGGGTTCTACAAGTATGAGCTAACAACGTACAAGCAC CCTTACGGGCATTCCAATTGCGGGAGAGATCCTGTCCCGATGCAATGGCGAGTATTGGGGCTTGATTACCTTCAC AACTTGCTGCTATGCTCTTGGCCTCGTCTGCGTCACGTTGGTCAAGGTAATCCACGTTGGCTGGCGTCACCCACT AGCGATATACTGA |