© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g11031.t1 |
| Gene name | |
| Location | scaffold_179:22642..24515 |
| Strand | + |
| Gene length (bp) | 1873 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.4E-37 | 57 | 456 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.7E-11 | 32 | 327 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 51 | 73 | 22 |
| 2 | 86 | 108 | 22 |
| 3 | 121 | 143 | 22 |
| 4 | 202 | 224 | 22 |
| 5 | 245 | 267 | 22 |
| 6 | 277 | 294 | 17 |
| 7 | 315 | 337 | 22 |
| 8 | 352 | 374 | 22 |
| 9 | 381 | 403 | 22 |
| 10 | 408 | 430 | 22 |
| 11 | 442 | 464 | 22 |
| 12 | 484 | 506 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g11031.t1 MAEKTEVTLNLTAAAPGSDKPEEARDVPDATVPATEGLQGGYLTGWRLSALLLCLGVSTFLTGLNESLVATAIPK ITVHFHSVDDIGWYSTAYFLSSSCTILLFGRLYNQYPAKPILAGSIALFEIGCLVSGTATSSAAFIIGRLLSGFG CAGMNTGCLTVLAHAVPLERRPIFSAIIDGGYSVASSCGPLLGGAITTRLSWRWCFLINTPPGALCILAILIVYQ DRYLPAGASEQLVDQIARLDLGATLLFASSVTCLVLPLQWGGSTFPWSSPKVIALFVLFGIFLATLIGHQLWRGE AAMVPRRVGRQREMVGAAVYAFFVGGTANILEYYIPLWFQEVWTVSALRSGIYTIPMVAGFVVFSLVAGFGVSST GYYLPFMYLGSCALIAGSALLTTIHPASQLASLLGFEILIGVGGGSGIQQAYLVAQAILTTQDVAIGLAVIVMAQ TLGGTVLLSIATSVVQEGLVTATSRGDSPSISGAIIPAFYLAIATSVGSLASLALLRMRSIKGDASAAK* |
| Coding | >Ani_SJS72_1|g11031.t1 ATGGCCGAGAAGACGGAGGTGACACTCAACCTCACTGCAGCAGCCCCAGGCTCTGATAAGCCAGAGGAGGCCAGG GATGTACCGGATGCCACAGTACCCGCAACCGAAGGTCTTCAAGGGGGCTACCTCACGGGATGGCGACTGTCGGCT CTCTTGCTATGTCTGGGAGTGAGCACATTTTTGACTGGCCTGAATGAGAGTCTAGTCGCCACAGCCATCCCCAAG ATCACCGTGCATTTCCACTCAGTGGACGATATCGGGTGGTATAGTACCGCTTATTTCCTATCTTCATCTTGTACG ATCCTTCTTTTCGGCAGGTTGTACAACCAATATCCAGCCAAGCCAATCTTAGCCGGATCGATCGCTTTGTTCGAG ATCGGCTGCCTCGTGAGCGGAACTGCGACTTCGTCCGCAGCTTTTATCATCGGCCGGCTTCTGTCTGGCTTCGGT TGCGCAGGGATGAACACGGGCTGCTTAACAGTTCTGGCTCATGCCGTCCCTCTTGAGCGCCGCCCCATCTTTTCC GCCATAATCGATGGCGGCTATAGTGTTGCTTCGTCCTGCGGGCCATTGCTCGGCGGAGCGATTACCACTCGACTG TCGTGGCGATGGTGCTTTCTCATCAACACTCCCCCGGGGGCCCTGTGCATTTTGGCCATCCTTATCGTCTATCAG GATCGGTACCTCCCTGCCGGTGCATCGGAGCAGTTGGTGGACCAGATTGCCCGCCTTGACTTGGGGGCCACCTTG CTTTTTGCATCGTCCGTCACCTGTCTGGTTTTGCCGCTGCAATGGGGGGGCAGCACCTTCCCATGGTCGAGCCCG AAAGTGATTGCCTTGTTCGTCTTGTTTGGCATCTTTCTGGCCACTCTGATCGGCCATCAACTCTGGCGGGGGGAG GCTGCGATGGTCCCGCGCCGCGTGGGCCGGCAGAGGGAGATGGTCGGGGCAGCTGTATATGCCTTTTTTGTCGGA GGCACGGCCAATATTCTCGAGTACTACATTCCCCTGTGGTTTCAAGAGGTCTGGACCGTGAGCGCACTGCGATCC GGCATCTATACCATTCCCATGGTCGCCGGGTTCGTCGTGTTCAGTCTTGTCGCCGGGTTTGGCGTCTCGTCTACC GGATACTATCTGCCGTTCATGTACTTGGGCAGCTGTGCGCTCATTGCCGGATCCGCGCTGCTGACGACCATCCAC CCGGCTTCGCAGTTGGCCTCCTTGCTGGGCTTCGAGATCCTGATCGGTGTCGGCGGTGGCTCGGGGATCCAACAG GCGTACTTGGTGGCTCAGGCCATCTTGACCACGCAAGACGTGGCTATTGGACTGGCTGTCATCGTCATGGCACAG ACCTTGGGCGGGACGGTTTTGCTGTCCATCGCCACCAGTGTGGTTCAGGAAGGATTGGTAACCGCCACCAGCCGC GGTGACTCGCCATCCATCAGTGGTGCCATCATTCCGGCATTTTACCTCGCCATCGCGACCAGTGTTGGCTCCTTG GCGTCTCTGGCGCTGCTGAGAATGCGGTCCATCAAAGGCGATGCGAGCGCAGCCAAGTAG |
| Transcript | >Ani_SJS72_1|g11031.t1 ATGGCCGAGAAGACGGAGGTGACACTCAACCTCACTGCAGCAGCCCCAGGCTCTGATAAGCCAGAGGAGGCCAGG GATGTACCGGATGCCACAGTACCCGCAACCGAAGGTCTTCAAGGGGGCTACCTCACGGGATGGCGACTGTCGGCT CTCTTGCTATGTCTGGGAGTGAGCACATTTTTGACTGGCCTGAATGAGAGTCTAGTCGCCACAGCCATCCCCAAG ATCACCGTGCATTTCCACTCAGTGGACGATATCGGGTGGTATAGTACCGCTTATTTCCTATCTTCATCTTGTACG ATCCTTCTTTTCGGCAGGTTGTACAACCAATATCCAGCCAAGCCAATCTTAGCCGGATCGATCGCTTTGTTCGAG ATCGGCTGCCTCGTGAGCGGAACTGCGACTTCGTCCGCAGCTTTTATCATCGGCCGGCTTCTGTCTGGCTTCGGT TGCGCAGGGATGAACACGGGCTGCTTAACAGTTCTGGCTCATGCCGTCCCTCTTGAGCGCCGCCCCATCTTTTCC GCCATAATCGATGGCGGCTATAGTGTTGCTTCGTCCTGCGGGCCATTGCTCGGCGGAGCGATTACCACTCGACTG TCGTGGCGATGGTGCTTTCTCATCAACACTCCCCCGGGGGCCCTGTGCATTTTGGCCATCCTTATCGTCTATCAG GATCGGTACCTCCCTGCCGGTGCATCGGAGCAGTTGGTGGACCAGATTGCCCGCCTTGACTTGGGGGCCACCTTG CTTTTTGCATCGTCCGTCACCTGTCTGGTTTTGCCGCTGCAATGGGGGGGCAGCACCTTCCCATGGTCGAGCCCG AAAGTGATTGCCTTGTTCGTCTTGTTTGGCATCTTTCTGGCCACTCTGATCGGCCATCAACTCTGGCGGGGGGAG GCTGCGATGGTCCCGCGCCGCGTGGGCCGGCAGAGGGAGATGGTCGGGGCAGCTGTATATGCCTTTTTTGTCGGA GGCACGGCCAATATTCTCGAGTACTACATTCCCCTGTGGTTTCAAGAGGTCTGGACCGTGAGCGCACTGCGATCC GGCATCTATACCATTCCCATGGTCGCCGGGTTCGTCGTGTTCAGTCTTGTCGCCGGGTTTGGCGTCTCGTCTACC GGATACTATCTGCCGTTCATGTACTTGGGCAGCTGTGCGCTCATTGCCGGATCCGCGCTGCTGACGACCATCCAC CCGGCTTCGCAGTTGGCCTCCTTGCTGGGCTTCGAGATCCTGATCGGTGTCGGCGGTGGCTCGGGGATCCAACAG GCGTACTTGGTGGCTCAGGCCATCTTGACCACGCAAGACGTGGCTATTGGACTGGCTGTCATCGTCATGGCACAG ACCTTGGGCGGGACGGTTTTGCTGTCCATCGCCACCAGTGTGGTTCAGGAAGGATTGGTAACCGCCACCAGCCGC GGTGACTCGCCATCCATCAGTGGTGCCATCATTCCGGCATTTTACCTCGCCATCGCGACCAGTGTTGGCTCCTTG GCGTCTCTGGCGCTGCTGAGAATGCGGTCCATCAAAGGCGATGCGAGCGCAGCCAAGTAG |
| Gene | >Ani_SJS72_1|g11031.t1 ATGGCCGAGAAGACGGAGGTGACACTCAACCTCACTGCAGCAGCCCCAGGCTCTGATAAGCCAGAGGAGGCCAGG GATGTACCGGATGCCACAGTACCCGCAACCGAAGGTCTTCAAGGGGGCTACCTCACGGGATGGCGACTGTCGGCT CTCTTGCTATGTCTGGGAGTGAGCACATTTTTGACTGGCCTGGTACGAACCCCTGCGAACAATGTCATTCGAGTC GGTCACCCCAGAGCTTCGCTAATGTATGGCAATGGCAATCTCAGAATGAGAGTCTAGTCGCCACAGCCATCCCCA AGATCACCGTGCATTTCCACTCAGTGGACGATATCGGGTGGTATAGTACCGCTTAGTACGTGAGCCTGAAAGGTG ATCCCCTGGCCTTGATGCTCAGCTTACAAGGATACTCAACTCCCTCTTCTATCAGTTTCCTATCTTCATCTTGTA CGATCCTTCTTTTCGGCAGGTTGTACAACCAATATCCAGCCAAGCCAATCTTAGCCGGATCGATCGCTTTGTTCG AGATCGGCTGCCTCGTGAGCGGAACTGCGACTTCGTCCGCAGCTTTTATCATCGGCCGGCTTCTGTCTGGCTTCG GTTGCGCAGGGATGAACACGGGCTGCTTAACGTGAGTTGTCCAGCATACCAGACCACGAGAACAATATATCCGAT GAACCGTCCTCGCTGATTAAGGCTGCAGAGTTCTGGCTCATGCCGTCCCTCTTGAGCGCCGCCCCATCTTTTCCG CCATAATCGATGGCGGCTATAGTGTTGCTTCGTCCTGCGGGCCATTGCTCGGCGGAGCGATTACCACTCGACTGT CGTGGCGATGGTGCTTTCTCATCAACACTCCCCCGGGGGCCCTGTGCATTTTGGCCATCCTTATCGTCTATCAGG ATCGGTACCTCCCTGCCGGTGCATCGGAGCAGTTGGTGGACCAGATTGCCCGCCTTGACTTGGGGGCCACCTTGC TTTTTGCATCGTCCGTCACCTGTCTGGTTTTGCCGCTGCAATGGGGGGGCAGCACCTTCCCATGGTCGAGCCCGA AAGTGATTGCCTTGTTCGTCTTGTTTGGCATCTTTCTGGCCACTCTGATCGGCCATCAACTCTGGCGGGGGGAGG CTGCGATGGTCCCGCGCCGCGTGGGCCGGCAGAGGGAGATGGTCGGGGCAGCTGTATATGCCTTTTTTGTCGGAG GCACGGCCAATATTCTCGAGTACTACGTAAGTCACTCCCATCCACTTACCTATCCCGCGTTCGGTTGGTGTTCAG TGGCTGAAGGGCGAGGGCTCCCCCCCCTCCCTATCCGTAGATTCCCCTGTGGTTTCAAGAGGTCTGGACCGTGAG CGCACTGCGATCCGGCATCTATACCATTCCCATGGTCGCCGGGTTCGTCGTGTTCAGTCTTGTCGCCGGGTTTGG CGTCTCGTCTACCGGATACTATCTGCCGTTCATGTACTTGGGCAGCTGTGCGCTCATTGCCGGATCCGCGCTGCT GACGACCATCCACCCGGCTTCGCAGTTGGCCTCCTTGCTGGGCTTCGAGATCCTGATCGGTGTCGGCGGTGGCTC GGGGATCCAACAGGCGTACTTGGTGGCTCAGGCCATCTTGACCACGCAAGACGTGGCTATTGGACTGGCTGTCAT CGTCATGGCACAGACCTTGGGCGGGACGGTTTTGCTGTCCATCGCCACCAGTGTGGTTCAGGAAGGATTGGTAAC CGCCACCAGCCGCGGTGACTCGCCATCCATCAGTGGTGCCATCATTCCGGCATTTTACCTCGCCATCGCGACCAG TGTTGGCTCCTTGGCGTCTCTGGCGCTGCTGAGAATGCGGTCCATCAAAGGCGATGCGAGCGCAGCCAAGTAG |