© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g1101.t1 |
| Gene name | |
| Location | scaffold_005:174827..175827 |
| Strand | - |
| Gene length (bp) | 1000 |
| Transcript length (bp) | 942 |
| Coding sequence length (bp) | 942 |
| Protein length (aa) | 314 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10261 | Scs3p | Inositol phospholipid synthesis and fat-storage-inducing TM | 3.3E-71 | 77 | 295 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019915 | lipid storage | Yes |
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0031090 | organelle membrane | No |
| GO:0051235 | maintenance of location | No |
| GO:0008150 | biological_process | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 86 | 108 | 22 |
| 3 | 204 | 226 | 22 |
| 4 | 255 | 277 | 22 |
| 5 | 281 | 298 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g1101.t1 MPSPDPPAPAIRPFQPPITALLIYPATLIVGSLFSVLSPTAQGTRDDGSSTLHPHAEPLAPSIASDLNLSFPPPR PVNYFARKDNIFNLYFVKVGWLWTTAALAFILLSQPAYTLAASHRARRTGQAVLRYVLATTVWYLTTQWFFGPPI IDRSFVLTGGKCEQAVPLAENEPAAADVKTLLTAAACKHAGGAWKGGHDVSGHVFLLVLATSLVVFELVGGSHGW GKGGGVNVNGSAEKEESEEVDMVRVWSGRFAWAVAGLGWWMLLMTGIWFHTWFEKLTGLLIALGTVYTIYILPRR VLPWRNVVGLPGV* |
| Coding | >Ani_SJS72_1|g1101.t1 ATGCCCTCGCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACCCATCACGGCGCTCCTCATCTACCCA GCGACCCTAATCGTGGGCTCACTCTTCTCAGTCCTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGC ACCCTCCACCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCTCAACCTCTCCTTCCCTCCGCCGCGC CCCGTCAACTACTTCGCCCGCAAAGACAACATCTTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACC GCCGCCCTCGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGCCAGCCACCGCGCCCGACGCACTGGC CAGGCCGTCCTCCGCTACGTCCTCGCCACAACAGTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATT ATTGACCGCAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCCGCTAGCGGAGAACGAGCCTGCCGCG GCAGATGTCAAGACGCTGCTTACGGCTGCGGCGTGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTT AGTGGGCATGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGAGTTGGTGGGTGGTAGTCATGGATGG GGGAAGGGAGGTGGTGTAAATGTGAATGGGTCGGCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTT TGGTCTGGGCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTTGTTGATGACGGGGATTTGGTTCCAT ACGTGGTTTGAGAAGTTGACGGGGCTGTTGATTGCCCTCGGCACGGTTTATACGATTTACATCCTGCCTCGACGG GTCTTGCCATGGAGGAATGTGGTAGGATTGCCGGGTGTCTGA |
| Transcript | >Ani_SJS72_1|g1101.t1 ATGCCCTCGCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACCCATCACGGCGCTCCTCATCTACCCA GCGACCCTAATCGTGGGCTCACTCTTCTCAGTCCTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGC ACCCTCCACCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCTCAACCTCTCCTTCCCTCCGCCGCGC CCCGTCAACTACTTCGCCCGCAAAGACAACATCTTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACC GCCGCCCTCGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGCCAGCCACCGCGCCCGACGCACTGGC CAGGCCGTCCTCCGCTACGTCCTCGCCACAACAGTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATT ATTGACCGCAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCCGCTAGCGGAGAACGAGCCTGCCGCG GCAGATGTCAAGACGCTGCTTACGGCTGCGGCGTGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTT AGTGGGCATGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGAGTTGGTGGGTGGTAGTCATGGATGG GGGAAGGGAGGTGGTGTAAATGTGAATGGGTCGGCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTT TGGTCTGGGCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTTGTTGATGACGGGGATTTGGTTCCAT ACGTGGTTTGAGAAGTTGACGGGGCTGTTGATTGCCCTCGGCACGGTTTATACGATTTACATCCTGCCTCGACGG GTCTTGCCATGGAGGAATGTGGTAGGATTGCCGGGTGTCTGA |
| Gene | >Ani_SJS72_1|g1101.t1 ATGCCCTCGCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACCCATCACGGCGCTCCTCATCTACCCA GCGACCCTAATCGTGGGCTCACTCTTCTCAGTCCTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGC ACCCTCCACCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCTCAACCTCTCCTTCCCTCCGCCGCGC CCCGTCAACTACTTCGCCCGCAAAGACAACATCTTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACC GCCGCCCTCGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGCCAGCCACCGCGCCCGACGCACTGGC CAGGCCGTCCTCCGCTACGTCCTCGCCACAACAGTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATT ATTGACCGCAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCCGCTAGCGGAGAACGAGCCTGCCGCG GCAGATGTCAAGACGCTGCTTACGGCTGCGGCGTGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTT AGTGGGCATGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGAGTTGGTGGGTGGTAGTCATGGATGG GGGAAGGGAGGTGGTGTAAATGTGAATGGGTCGGCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTT TGGTCTGGGCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTTGTTGATGACGGGGATTTGGTTCCAT ACGTGGTTTGAGAAGGTATGTTACTGTCTGATTGGGAGTGGAGTGATAATGATGATGATGCTAATGATTGCAGTT GACGGGGCTGTTGATTGCCCTCGGCACGGTTTATACGATTTACATCCTGCCTCGACGGGTCTTGCCATGGAGGAA TGTGGTAGGATTGCCGGGTGTCTGA |